Gene annotation
Transcriptome id Sobic.010G156500.1
Synonym Sb10g020960
Functional annotation expressed protein
UniProt C5Z3Q3
Pfam -
Panther DB PTHR33869 PTHR33869:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os06g34280.1 : expressed protein
MaizeGDB (Corn) Zm00025a050942
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
2 Sobic.002G338500 sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
3 Sobic.003G364000 glycosyl hydrolase, putative, expressed K01183: chitinase
4 Sobic.003G382600 ARGOS, putative, expressed -
5 Sobic.005G213500 leucoanthocyanidin dioxygenase, putative, expressed -
6 Sobic.001G279500 VQ domain containing protein, putative, expressed -
7 Sobic.002G302500 -(PubMedID : 29147737)@serine/threonine-protein kinase receptor precursor, putative, expressed -
8 Sobic.003G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
9 Sobic.009G231000 - -
10 Sobic.005G213600 Deletion of the Low Germination Stimulant 1 (LGS1) gene gives a Striga‐resistance trait in sorghum. Strigolactone precursor 18-hydroxycarlactonoic acid (18-OH-CLA) is a substrate for LGS1.(PubMedID : 34525227)@sulfotransferase domain containing protein, expressed -
11 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
12 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
13 Sobic.009G154200 MYB family transcription factor, putative, expressed -
14 Sobic.004G109900 zinc finger, C3HC4 type domain containing protein, expressed -
15 Sobic.007G008100 invertase/pectin methylesterase inhibitor family protein, putative, expressed -
16 Sobic.004G203700 ubiquitin family protein, putative, expressed -
17 Sobic.002G004900 transporter family protein, putative, expressed -
18 Sobic.009G139400 expressed protein -
19 Sobic.010G066700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein anthranilate N-benzoyltransferase protein 1 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
20 Sobic.002G042000 gibberellin receptor GID1L2, putative, expressed -


Gene co-expression network
sample Sobic010G156500 Sobic010G156500 Sobic003G364300 Sobic003G364300 Sobic010G156500--Sobic003G364300 Sobic002G338500 Sobic002G338500 Sobic010G156500--Sobic002G338500 Sobic003G364000 Sobic003G364000 Sobic010G156500--Sobic003G364000 Sobic003G382600 Sobic003G382600 Sobic010G156500--Sobic003G382600 Sobic005G213500 Sobic005G213500 Sobic010G156500--Sobic005G213500 Sobic001G279500 Sobic001G279500 Sobic010G156500--Sobic001G279500 Sobic002G302500 Sobic002G302500 Sobic010G156500--Sobic002G302500 Sobic003G280200 Sobic003G280200 Sobic010G156500--Sobic003G280200 Sobic009G231000 Sobic009G231000 Sobic010G156500--Sobic009G231000 Sobic003G364300--Sobic010G156500 Sobic003G364300--Sobic009G231000 Sobic003G364300--Sobic002G338500 Sobic003G364300--Sobic003G364000 Sobic007G008100 Sobic007G008100 Sobic003G364300--Sobic007G008100 Sobic002G042000 Sobic002G042000 Sobic003G364300--Sobic002G042000 Sobic003G364300--Sobic003G382600 Sobic001G054500 Sobic001G054500 Sobic003G364300--Sobic001G054500 Sobic003G364300--Sobic002G302500 Sobic003G043600 Sobic003G043600 Sobic002G338500--Sobic003G043600 Sobic002G338500--Sobic003G382600 Sobic002G055700 Sobic002G055700 Sobic002G338500--Sobic002G055700 Sobic002G338500--Sobic010G156500 Sobic002G338500--Sobic003G364300 Sobic009G145500 Sobic009G145500 Sobic002G338500--Sobic009G145500 Sobic009G145700 Sobic009G145700 Sobic002G338500--Sobic009G145700 Sobic002G353900 Sobic002G353900 Sobic002G338500--Sobic002G353900 Sobic005G196800 Sobic005G196800 Sobic002G338500--Sobic005G196800 Sobic010G088700 Sobic010G088700 Sobic003G364000--Sobic010G088700 Sobic009G217700 Sobic009G217700 Sobic003G364000--Sobic009G217700 Sobic003G364000--Sobic010G156500 Sobic003G364000--Sobic003G364300 Sobic003G364000--Sobic003G280200 Sobic010G259500 Sobic010G259500 Sobic003G364000--Sobic010G259500 Sobic003G364000--Sobic005G213500 Sobic002G034800 Sobic002G034800 Sobic003G364000--Sobic002G034800 Sobic003G364000--Sobic003G382600 Sobic003G382600--Sobic002G055700 Sobic004G189400 Sobic004G189400 Sobic003G382600--Sobic004G189400 Sobic003G382600--Sobic002G338500 Sobic003G382600--Sobic002G353900 Sobic003G303100 Sobic003G303100 Sobic003G382600--Sobic003G303100 Sobic004G237800 Sobic004G237800 Sobic003G382600--Sobic004G237800 Sobic005G091500 Sobic005G091500 Sobic003G382600--Sobic005G091500 Sobic008G050600 Sobic008G050600 Sobic003G382600--Sobic008G050600 Sobic003G382600--Sobic003G043600 Sobic005G213500--Sobic010G156500 Sobic005G213500--Sobic003G364000 Sobic005G213600 Sobic005G213600 Sobic005G213500--Sobic005G213600 Sobic005G213500--Sobic003G364300 Sobic006G132900 Sobic006G132900 Sobic005G213500--Sobic006G132900 Sobic005G213500--Sobic002G338500 Sobic010G043900 Sobic010G043900 Sobic005G213500--Sobic010G043900 Sobic005G213500--Sobic010G259500 Sobic005G005600 Sobic005G005600 Sobic005G213500--Sobic005G005600 Sobic001G279500--Sobic003G382600 Sobic001G112200 Sobic001G112200 Sobic001G279500--Sobic001G112200 Sobic001G279500--Sobic010G156500 Sobic001G310600 Sobic001G310600 Sobic001G279500--Sobic001G310600 Sobic001G279500--Sobic003G364300 Sobic005G107900 Sobic005G107900 Sobic001G279500--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic001G279500--Sobic001G502400 Sobic003G345100 Sobic003G345100 Sobic001G279500--Sobic003G345100 Sobic001G279500--Sobic002G338500 Sobic002G302500--Sobic002G353900 Sobic002G017800 Sobic002G017800 Sobic002G302500--Sobic002G017800 Sobic009G077800 Sobic009G077800 Sobic002G302500--Sobic009G077800 Sobic002G302500--Sobic002G055700 Sobic001G318500 Sobic001G318500 Sobic002G302500--Sobic001G318500 Sobic002G302500--Sobic002G338500 Sobic002G302500--Sobic010G156500 Sobic002G302500--Sobic003G364300 Sobic002G004900 Sobic002G004900 Sobic002G302500--Sobic002G004900 Sobic003G417700 Sobic003G417700 Sobic003G280200--Sobic003G417700 Sobic002G415100 Sobic002G415100 Sobic003G280200--Sobic002G415100 Sobic009G139400 Sobic009G139400 Sobic003G280200--Sobic009G139400 Sobic003G297600 Sobic003G297600 Sobic003G280200--Sobic003G297600 Sobic003G280200--Sobic009G077800 Sobic005G029200 Sobic005G029200 Sobic003G280200--Sobic005G029200 Sobic003G280200--Sobic003G364000 Sobic003G280200--Sobic002G004900 Sobic003G280200--Sobic002G034800 Sobic009G231000--Sobic003G364300 Sobic010G259600 Sobic010G259600 Sobic009G231000--Sobic010G259600 Sobic001G325400 Sobic001G325400 Sobic009G231000--Sobic001G325400 Sobic006G039100 Sobic006G039100 Sobic009G231000--Sobic006G039100 Sobic002G125700 Sobic002G125700 Sobic009G231000--Sobic002G125700 Sobic009G231000--Sobic002G055700 Sobic003G087300 Sobic003G087300 Sobic009G231000--Sobic003G087300 Sobic009G231000--Sobic003G297600 Sobic009G231000--Sobic010G156500
Octagon: transcription factors


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