Gene annotation
Transcriptome id Sobic.002G004900.2
Synonym ATSTP1, Sb02g000650, STP1
Functional annotation transporter family protein, putative, expressed
UniProt C5X761 , C6JSD2 , A0A109NDB4
Pfam PF07690
Panther DB PTHR23500:SF47 PTHR23500
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT1G11260 : sugar transporter 1
RAP-DB (Rice) LOC_Os07g01560.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a030010 , Zm00025a048377 , Zm00025a001328 , Zm00025a006257 , Zm00025a044857
Brachypodium KQK04292 , KQK22858 , KQK20404 , KQK21214 , KQJ89755 , KQK15772 , KQJ93434
Barley HORVU3Hr1G102840.2 , HORVU3Hr1G102840.3 , HORVU3Hr1G102840.4 , HORVU3Hr1G102840.5 , HORVU4Hr1G067450.7 , HORVU4Hr1G067450.4 , HORVU4Hr1G067450.5 , HORVU4Hr1G067450.3 , HORVU4Hr1G067450.1 , HORVU4Hr1G067450.8 , HORVU2Hr1G064160.1 , HORVU2Hr1G064160.3 , HORVU2Hr1G064160.2 , HORVU2Hr1G064160.5 , HORVU2Hr1G064160.4 , HORVU2Hr1G064160.7 , HORVU2Hr1G064160.6 , HORVU2Hr1G064160.9 , HORVU2Hr1G064160.8 , HORVU5Hr1G000380.1 , HORVU4Hr1G067450.10 , HORVU2Hr1G064160.11 , HORVU2Hr1G064160.10 , HORVU2Hr1G064160.12 , HORVU7Hr1G069030.1 , HORVU7Hr1G069030.3 , HORVU7Hr1G069030.2 , HORVU7Hr1G069030.5 , HORVU7Hr1G069030.4 , HORVU2Hr1G041080.9 , HORVU2Hr1G041080.8 , HORVU2Hr1G041080.3 , HORVU2Hr1G041080.2 , HORVU2Hr1G041080.1 , HORVU2Hr1G041080.7 , HORVU2Hr1G041080.6 , HORVU2Hr1G041080.5 , HORVU2Hr1G041080.4
Wheat TraesCS3D02G470300 , TraesCS3A02G475400 , TraesCS3B02G518800 , TraesCS3A02G475200 , TraesCS2A02G205500 , TraesCS4A02G066200 , TraesCS7D02G286600 , TraesCS2B02G232900 , TraesCS3B02G518900 , TraesCS4D02G243100 , TraesCS4B02G243500 , TraesCS7A02G288800 , TraesCS2D02G264200 , TraesCS3D02G470200 , TraesCS2A02G259500 , TraesCS2B02G282400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G318500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
2 Sobic.008G172600 ATCHX, putative, expressed -
3 Sobic.002G017800 expressed protein -
4 Sobic.003G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
5 Sobic.001G503100 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
6 Sobic.002G302500 -(PubMedID : 29147737)@serine/threonine-protein kinase receptor precursor, putative, expressed -
7 Sobic.009G009600 expressed protein -
8 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
9 Sobic.005G011200 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
11 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
12 Sobic.002G338500 sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
13 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
14 Sobic.010G052700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
15 Sobic.003G364000 glycosyl hydrolase, putative, expressed K01183: chitinase
16 Sobic.009G077800 expressed protein -
17 Sobic.010G156500 expressed protein -
18 Sobic.009G231000 - -
19 Sobic.002G125700 similar to Aquaporin PIP2-6(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09872: aquaporin PIP
20 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease


Gene co-expression network
sample Sobic002G004900 Sobic002G004900 Sobic001G318500 Sobic001G318500 Sobic002G004900--Sobic001G318500 Sobic008G172600 Sobic008G172600 Sobic002G004900--Sobic008G172600 Sobic002G017800 Sobic002G017800 Sobic002G004900--Sobic002G017800 Sobic003G280200 Sobic003G280200 Sobic002G004900--Sobic003G280200 Sobic001G503100 Sobic001G503100 Sobic002G004900--Sobic001G503100 Sobic002G302500 Sobic002G302500 Sobic002G004900--Sobic002G302500 Sobic009G009600 Sobic009G009600 Sobic002G004900--Sobic009G009600 Sobic001G325400 Sobic001G325400 Sobic002G004900--Sobic001G325400 Sobic005G011200 Sobic005G011200 Sobic002G004900--Sobic005G011200 Sobic001G318500--Sobic002G004900 Sobic001G318500--Sobic002G017800 Sobic009G111000 Sobic009G111000 Sobic001G318500--Sobic009G111000 Sobic001G318500--Sobic002G302500 Sobic002G055700 Sobic002G055700 Sobic001G318500--Sobic002G055700 Sobic004G203700 Sobic004G203700 Sobic001G318500--Sobic004G203700 Sobic004G148200 Sobic004G148200 Sobic001G318500--Sobic004G148200 Sobic001G367600 Sobic001G367600 Sobic001G318500--Sobic001G367600 Sobic008G027600 Sobic008G027600 Sobic001G318500--Sobic008G027600 Sobic009G187200 Sobic009G187200 Sobic008G172600--Sobic009G187200 Sobic003G255200 Sobic003G255200 Sobic008G172600--Sobic003G255200 Sobic008G172600--Sobic002G004900 Sobic004G046200 Sobic004G046200 Sobic008G172600--Sobic004G046200 Sobic006G044100 Sobic006G044100 Sobic008G172600--Sobic006G044100 Sobic008G172600--Sobic003G280200 Sobic008G172600--Sobic001G325400 Sobic008G172600--Sobic001G503100 Sobic002G125700 Sobic002G125700 Sobic008G172600--Sobic002G125700 Sobic002G017800--Sobic001G367600 Sobic002G017800--Sobic009G111000 Sobic002G017800--Sobic001G318500 Sobic005G018700 Sobic005G018700 Sobic002G017800--Sobic005G018700 Sobic009G077800 Sobic009G077800 Sobic002G017800--Sobic009G077800 Sobic002G017800--Sobic002G055700 Sobic002G017800--Sobic001G325400 Sobic006G103000 Sobic006G103000 Sobic002G017800--Sobic006G103000 Sobic001G500000 Sobic001G500000 Sobic002G017800--Sobic001G500000 Sobic003G417700 Sobic003G417700 Sobic003G280200--Sobic003G417700 Sobic002G415100 Sobic002G415100 Sobic003G280200--Sobic002G415100 Sobic009G139400 Sobic009G139400 Sobic003G280200--Sobic009G139400 Sobic003G297600 Sobic003G297600 Sobic003G280200--Sobic003G297600 Sobic003G280200--Sobic009G077800 Sobic005G029200 Sobic005G029200 Sobic003G280200--Sobic005G029200 Sobic003G364000 Sobic003G364000 Sobic003G280200--Sobic003G364000 Sobic003G280200--Sobic002G004900 Sobic002G034800 Sobic002G034800 Sobic003G280200--Sobic002G034800 Sobic001G503100--Sobic002G125700 Sobic006G277600 Sobic006G277600 Sobic001G503100--Sobic006G277600 Sobic003G352300 Sobic003G352300 Sobic001G503100--Sobic003G352300 Sobic006G125100 Sobic006G125100 Sobic001G503100--Sobic006G125100 Sobic010G052700 Sobic010G052700 Sobic001G503100--Sobic010G052700 Sobic004G107700 Sobic004G107700 Sobic001G503100--Sobic004G107700 Sobic001G503100--Sobic003G255200 Sobic001G503100--Sobic002G004900 Sobic003G255500 Sobic003G255500 Sobic001G503100--Sobic003G255500 Sobic002G353900 Sobic002G353900 Sobic002G302500--Sobic002G353900 Sobic002G302500--Sobic002G017800 Sobic002G302500--Sobic009G077800 Sobic002G302500--Sobic002G055700 Sobic002G302500--Sobic001G318500 Sobic002G338500 Sobic002G338500 Sobic002G302500--Sobic002G338500 Sobic010G156500 Sobic010G156500 Sobic002G302500--Sobic010G156500 Sobic003G364300 Sobic003G364300 Sobic002G302500--Sobic003G364300 Sobic002G302500--Sobic002G004900 Sobic009G009600--Sobic002G004900 Sobic009G009600--Sobic001G503100 Sobic003G087300 Sobic003G087300 Sobic009G009600--Sobic003G087300 Sobic009G009600--Sobic010G052700 Sobic009G254900 Sobic009G254900 Sobic009G009600--Sobic009G254900 Sobic001G297000 Sobic001G297000 Sobic009G009600--Sobic001G297000 Sobic004G148100 Sobic004G148100 Sobic009G009600--Sobic004G148100 Sobic009G009600--Sobic001G325400 Sobic009G009600--Sobic003G364300 Sobic006G039100 Sobic006G039100 Sobic001G325400--Sobic006G039100 Sobic001G325400--Sobic009G111000 Sobic001G325400--Sobic002G125700 Sobic001G462700 Sobic001G462700 Sobic001G325400--Sobic001G462700 Sobic001G325400--Sobic009G077800 Sobic001G325400--Sobic002G017800 Sobic009G231000 Sobic009G231000 Sobic001G325400--Sobic009G231000 Sobic007G087200 Sobic007G087200 Sobic001G325400--Sobic007G087200 Sobic003G117600 Sobic003G117600 Sobic001G325400--Sobic003G117600 Sobic001G333400 Sobic001G333400 Sobic005G011200--Sobic001G333400 Sobic005G051500 Sobic005G051500 Sobic005G011200--Sobic005G051500 Sobic001G187200 Sobic001G187200 Sobic005G011200--Sobic001G187200 Sobic006G268800 Sobic006G268800 Sobic005G011200--Sobic006G268800 Sobic005G011200--Sobic002G004900 Sobic005G011200--Sobic010G052700 Sobic001G400800 Sobic001G400800 Sobic005G011200--Sobic001G400800 Sobic003G252800 Sobic003G252800 Sobic005G011200--Sobic003G252800 Sobic002G336700 Sobic002G336700 Sobic005G011200--Sobic002G336700
Octagon: transcription factors


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