Gene annotation
Transcriptome id Sobic.009G009600.1
Synonym
Functional annotation expressed protein
UniProt A0A1B6P5R2
Pfam PF00280
Panther DB PTHR33091 PTHR33091:SF8
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009611; response to wounding GO:0004867serine-type endopeptidase inhibitor activity


Orthologs (automatic annotation)
TAIR AT5G43580 : Serine protease inhibitor, potato inhibitor I-type family protein
RAP-DB (Rice) LOC_Os12g25090.2 : expressed protein
MaizeGDB (Corn) Zm00025a038277 , Zm00025a038276
Brachypodium KQK08051
Barley HORVU5Hr1G075670.1 , HORVU6Hr1G013810.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G004900 transporter family protein, putative, expressed -
2 Sobic.001G503100 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
3 Sobic.003G087300 nuclease PA3, putative, expressed -
4 Sobic.010G052700 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in leaf, expression induced by IAA treatment"(PubMedID : 20499123)@OsIAA20 - Auxin-responsive Aux/IAA gene family member, expressed K14484: auxin-responsive protein IAA
5 Sobic.009G254900 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
6 Sobic.001G297000 glycoprotein, putative, expressed -
7 Sobic.004G148100 Cupin domain containing protein, expressed -
8 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
9 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
10 Sobic.008G172600 ATCHX, putative, expressed -
11 Sobic.006G121500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@cytochrome P450, putative, expressed -
12 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
13 Sobic.009G231000 - -
14 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
15 Sobic.002G125700 similar to Aquaporin PIP2-6(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09872: aquaporin PIP
16 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
17 Sobic.006G039100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
18 Sobic.002G338500 sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
19 Sobic.001G318500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.003G364000 glycosyl hydrolase, putative, expressed K01183: chitinase


Gene co-expression network
sample Sobic009G009600 Sobic009G009600 Sobic002G004900 Sobic002G004900 Sobic009G009600--Sobic002G004900 Sobic001G503100 Sobic001G503100 Sobic009G009600--Sobic001G503100 Sobic003G087300 Sobic003G087300 Sobic009G009600--Sobic003G087300 Sobic010G052700 Sobic010G052700 Sobic009G009600--Sobic010G052700 Sobic009G254900 Sobic009G254900 Sobic009G009600--Sobic009G254900 Sobic001G297000 Sobic001G297000 Sobic009G009600--Sobic001G297000 Sobic004G148100 Sobic004G148100 Sobic009G009600--Sobic004G148100 Sobic001G325400 Sobic001G325400 Sobic009G009600--Sobic001G325400 Sobic003G364300 Sobic003G364300 Sobic009G009600--Sobic003G364300 Sobic001G318500 Sobic001G318500 Sobic002G004900--Sobic001G318500 Sobic008G172600 Sobic008G172600 Sobic002G004900--Sobic008G172600 Sobic002G017800 Sobic002G017800 Sobic002G004900--Sobic002G017800 Sobic003G280200 Sobic003G280200 Sobic002G004900--Sobic003G280200 Sobic002G004900--Sobic001G503100 Sobic002G302500 Sobic002G302500 Sobic002G004900--Sobic002G302500 Sobic002G004900--Sobic009G009600 Sobic002G004900--Sobic001G325400 Sobic005G011200 Sobic005G011200 Sobic002G004900--Sobic005G011200 Sobic002G125700 Sobic002G125700 Sobic001G503100--Sobic002G125700 Sobic006G277600 Sobic006G277600 Sobic001G503100--Sobic006G277600 Sobic003G352300 Sobic003G352300 Sobic001G503100--Sobic003G352300 Sobic006G125100 Sobic006G125100 Sobic001G503100--Sobic006G125100 Sobic001G503100--Sobic010G052700 Sobic004G107700 Sobic004G107700 Sobic001G503100--Sobic004G107700 Sobic003G255200 Sobic003G255200 Sobic001G503100--Sobic003G255200 Sobic001G503100--Sobic002G004900 Sobic003G255500 Sobic003G255500 Sobic001G503100--Sobic003G255500 Sobic002G416600 Sobic002G416600 Sobic003G087300--Sobic002G416600 Sobic003G087300--Sobic010G052700 Sobic010G239300 Sobic010G239300 Sobic003G087300--Sobic010G239300 Sobic007G141500 Sobic007G141500 Sobic003G087300--Sobic007G141500 Sobic006G039100 Sobic006G039100 Sobic003G087300--Sobic006G039100 Sobic004G166700 Sobic004G166700 Sobic003G087300--Sobic004G166700 Sobic009G231000 Sobic009G231000 Sobic003G087300--Sobic009G231000 Sobic003G087300--Sobic002G125700 Sobic001G252300 Sobic001G252300 Sobic003G087300--Sobic001G252300 Sobic010G052700--Sobic001G503100 Sobic010G052700--Sobic003G087300 Sobic001G333400 Sobic001G333400 Sobic010G052700--Sobic001G333400 Sobic010G052700--Sobic003G280200 Sobic010G052700--Sobic007G141500 Sobic010G052700--Sobic005G011200 Sobic003G364000 Sobic003G364000 Sobic010G052700--Sobic003G364000 Sobic010G052700--Sobic002G004900 Sobic010G052700--Sobic002G125700 Sobic002G367400 Sobic002G367400 Sobic009G254900--Sobic002G367400 Sobic001G466000 Sobic001G466000 Sobic009G254900--Sobic001G466000 Sobic009G254900--Sobic002G004900 Sobic002G353900 Sobic002G353900 Sobic009G254900--Sobic002G353900 Sobic006G113200 Sobic006G113200 Sobic009G254900--Sobic006G113200 Sobic009G254900--Sobic002G017800 Sobic010G259600 Sobic010G259600 Sobic009G254900--Sobic010G259600 Sobic009G254900--Sobic002G302500 Sobic009G143400 Sobic009G143400 Sobic009G254900--Sobic009G143400 Sobic001G297000--Sobic001G325400 Sobic001G297000--Sobic006G039100 Sobic009G077800 Sobic009G077800 Sobic001G297000--Sobic009G077800 Sobic001G297000--Sobic002G004900 Sobic003G117600 Sobic003G117600 Sobic001G297000--Sobic003G117600 Sobic001G297000--Sobic009G009600 Sobic001G297000--Sobic007G141500 Sobic001G297000--Sobic010G052700 Sobic004G225900 Sobic004G225900 Sobic001G297000--Sobic004G225900 Sobic002G040900 Sobic002G040900 Sobic004G148100--Sobic002G040900 Sobic006G162100 Sobic006G162100 Sobic004G148100--Sobic006G162100 Sobic006G113500 Sobic006G113500 Sobic004G148100--Sobic006G113500 Sobic005G177600 Sobic005G177600 Sobic004G148100--Sobic005G177600 Sobic007G215600 Sobic007G215600 Sobic004G148100--Sobic007G215600 Sobic001G054500 Sobic001G054500 Sobic004G148100--Sobic001G054500 Sobic004G148100--Sobic006G039100 Sobic002G042000 Sobic002G042000 Sobic004G148100--Sobic002G042000 Sobic007G008100 Sobic007G008100 Sobic004G148100--Sobic007G008100 Sobic001G325400--Sobic006G039100 Sobic009G111000 Sobic009G111000 Sobic001G325400--Sobic009G111000 Sobic001G325400--Sobic002G125700 Sobic001G462700 Sobic001G462700 Sobic001G325400--Sobic001G462700 Sobic001G325400--Sobic009G077800 Sobic001G325400--Sobic002G017800 Sobic001G325400--Sobic009G231000 Sobic007G087200 Sobic007G087200 Sobic001G325400--Sobic007G087200 Sobic001G325400--Sobic003G117600 Sobic010G156500 Sobic010G156500 Sobic003G364300--Sobic010G156500 Sobic003G364300--Sobic009G231000 Sobic002G338500 Sobic002G338500 Sobic003G364300--Sobic002G338500 Sobic003G364300--Sobic003G364000 Sobic003G364300--Sobic007G008100 Sobic003G364300--Sobic002G042000 Sobic003G382600 Sobic003G382600 Sobic003G364300--Sobic003G382600 Sobic003G364300--Sobic001G054500 Sobic003G364300--Sobic002G302500
Octagon: transcription factors


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