Gene annotation
Transcriptome id Sobic.009G254900.1
Synonym Sb09g030510
Functional annotation uncharacterized protein PA4923, putative, expressed
UniProt A0A1B6PAC5
Pfam PF03641
Panther DB PTHR31223 PTHR31223:SF13
NCBI CDD -
KEGG Orthology K06966; pyrimidine/purine-5'-nucleotide nucleosidase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G06300 : Putative lysine decarboxylase family protein
RAP-DB (Rice) LOC_Os05g51390.1 : uncharacterized protein PA4923, putative, expressed
MaizeGDB (Corn) Zm00025a044761
Brachypodium KQK04588 , KQK08488
Barley HORVU3Hr1G050770.18 , HORVU3Hr1G050770.19 , HORVU3Hr1G050770.14 , HORVU3Hr1G050770.16 , HORVU3Hr1G050770.10 , HORVU3Hr1G050770.12 , HORVU3Hr1G050770.13 , HORVU3Hr1G050770.20 , HORVU1Hr1G094290.1 , HORVU1Hr1G094290.7 , HORVU1Hr1G094290.6 , HORVU1Hr1G094290.5 , HORVU1Hr1G094290.4 , HORVU3Hr1G050770.7 , HORVU3Hr1G050770.3 , HORVU3Hr1G050770.1 , HORVU3Hr1G050770.8 , HORVU3Hr1G050770.9
Wheat TraesCS1D02G444500 , TraesCS3D02G213900 , TraesCS3B02G241600 , TraesCS3A02G211100
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G367400 esterase, putative, expressed -
2 Sobic.001G466000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase family 10 protein, putative, expressed -
3 Sobic.002G004900 transporter family protein, putative, expressed -
4 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
5 Sobic.006G113200 heavy metal associated domain containing protein, expressed -
6 Sobic.002G017800 expressed protein -
7 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
8 Sobic.002G302500 -(PubMedID : 29147737)@serine/threonine-protein kinase receptor precursor, putative, expressed -
9 Sobic.009G143400 chitin-inducible gibberellin-responsive protein, putative, expressed -
10 Sobic.003G417200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@esterase, putative, expressed -
11 Sobic.009G009600 expressed protein -
12 Sobic.005G018700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
13 Sobic.009G234100 WRKY49, expressed -
14 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
15 Sobic.002G190900 expressed protein -
16 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
17 Sobic.004G225900 GEM, putative, expressed -
18 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
19 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
20 Sobic.004G050000 ubiquitin family protein, putative, expressed K08770: ubiquitin C
K08770: ubiquitin C
K04551: ubiquitin B


Gene co-expression network
sample Sobic009G254900 Sobic009G254900 Sobic002G367400 Sobic002G367400 Sobic009G254900--Sobic002G367400 Sobic001G466000 Sobic001G466000 Sobic009G254900--Sobic001G466000 Sobic002G004900 Sobic002G004900 Sobic009G254900--Sobic002G004900 Sobic002G353900 Sobic002G353900 Sobic009G254900--Sobic002G353900 Sobic006G113200 Sobic006G113200 Sobic009G254900--Sobic006G113200 Sobic002G017800 Sobic002G017800 Sobic009G254900--Sobic002G017800 Sobic010G259600 Sobic010G259600 Sobic009G254900--Sobic010G259600 Sobic002G302500 Sobic002G302500 Sobic009G254900--Sobic002G302500 Sobic009G143400 Sobic009G143400 Sobic009G254900--Sobic009G143400 Sobic004G237800 Sobic004G237800 Sobic002G367400--Sobic004G237800 Sobic002G055700 Sobic002G055700 Sobic002G367400--Sobic002G055700 Sobic002G367400--Sobic002G017800 Sobic002G367400--Sobic001G466000 Sobic001G367600 Sobic001G367600 Sobic002G367400--Sobic001G367600 Sobic003G043500 Sobic003G043500 Sobic002G367400--Sobic003G043500 Sobic009G111000 Sobic009G111000 Sobic002G367400--Sobic009G111000 Sobic001G046100 Sobic001G046100 Sobic002G367400--Sobic001G046100 Sobic004G321300 Sobic004G321300 Sobic002G367400--Sobic004G321300 Sobic001G466000--Sobic002G367400 Sobic003G349600 Sobic003G349600 Sobic001G466000--Sobic003G349600 Sobic001G466000--Sobic009G254900 Sobic001G466000--Sobic009G143400 Sobic005G063100 Sobic005G063100 Sobic001G466000--Sobic005G063100 Sobic009G234100 Sobic009G234100 Sobic001G466000--Sobic009G234100 Sobic002G336600 Sobic002G336600 Sobic001G466000--Sobic002G336600 Sobic008G136400 Sobic008G136400 Sobic001G466000--Sobic008G136400 Sobic003G116800 Sobic003G116800 Sobic001G466000--Sobic003G116800 Sobic001G318500 Sobic001G318500 Sobic002G004900--Sobic001G318500 Sobic008G172600 Sobic008G172600 Sobic002G004900--Sobic008G172600 Sobic002G004900--Sobic002G017800 Sobic003G280200 Sobic003G280200 Sobic002G004900--Sobic003G280200 Sobic001G503100 Sobic001G503100 Sobic002G004900--Sobic001G503100 Sobic002G004900--Sobic002G302500 Sobic009G009600 Sobic009G009600 Sobic002G004900--Sobic009G009600 Sobic001G325400 Sobic001G325400 Sobic002G004900--Sobic001G325400 Sobic005G011200 Sobic005G011200 Sobic002G004900--Sobic005G011200 Sobic002G353900--Sobic002G055700 Sobic003G382600 Sobic003G382600 Sobic002G353900--Sobic003G382600 Sobic002G353900--Sobic001G367600 Sobic002G353900--Sobic002G302500 Sobic002G192000 Sobic002G192000 Sobic002G353900--Sobic002G192000 Sobic009G221400 Sobic009G221400 Sobic002G353900--Sobic009G221400 Sobic009G139400 Sobic009G139400 Sobic002G353900--Sobic009G139400 Sobic006G158600 Sobic006G158600 Sobic002G353900--Sobic006G158600 Sobic002G353900--Sobic009G234100 Sobic006G113200--Sobic009G254900 Sobic010G082600 Sobic010G082600 Sobic006G113200--Sobic010G082600 Sobic005G018700 Sobic005G018700 Sobic006G113200--Sobic005G018700 Sobic001G247300 Sobic001G247300 Sobic006G113200--Sobic001G247300 Sobic005G196800 Sobic005G196800 Sobic006G113200--Sobic005G196800 Sobic001G238400 Sobic001G238400 Sobic006G113200--Sobic001G238400 Sobic002G356101 Sobic002G356101 Sobic006G113200--Sobic002G356101 Sobic004G141100 Sobic004G141100 Sobic006G113200--Sobic004G141100 Sobic006G235100 Sobic006G235100 Sobic006G113200--Sobic006G235100 Sobic002G017800--Sobic001G367600 Sobic002G017800--Sobic009G111000 Sobic002G017800--Sobic001G318500 Sobic002G017800--Sobic005G018700 Sobic009G077800 Sobic009G077800 Sobic002G017800--Sobic009G077800 Sobic002G017800--Sobic002G055700 Sobic002G017800--Sobic001G325400 Sobic006G103000 Sobic006G103000 Sobic002G017800--Sobic006G103000 Sobic001G500000 Sobic001G500000 Sobic002G017800--Sobic001G500000 Sobic009G159400 Sobic009G159400 Sobic010G259600--Sobic009G159400 Sobic003G352300 Sobic003G352300 Sobic010G259600--Sobic003G352300 Sobic010G259600--Sobic009G234100 Sobic002G125700 Sobic002G125700 Sobic010G259600--Sobic002G125700 Sobic007G087200 Sobic007G087200 Sobic010G259600--Sobic007G087200 Sobic009G231000 Sobic009G231000 Sobic010G259600--Sobic009G231000 Sobic001G435000 Sobic001G435000 Sobic010G259600--Sobic001G435000 Sobic003G255200 Sobic003G255200 Sobic010G259600--Sobic003G255200 Sobic010G259600--Sobic002G017800 Sobic002G302500--Sobic002G353900 Sobic002G302500--Sobic002G017800 Sobic002G302500--Sobic009G077800 Sobic002G302500--Sobic002G055700 Sobic002G302500--Sobic001G318500 Sobic002G338500 Sobic002G338500 Sobic002G302500--Sobic002G338500 Sobic010G156500 Sobic010G156500 Sobic002G302500--Sobic010G156500 Sobic003G364300 Sobic003G364300 Sobic002G302500--Sobic003G364300 Sobic002G302500--Sobic002G004900 Sobic010G086200 Sobic010G086200 Sobic009G143400--Sobic010G086200 Sobic003G393700 Sobic003G393700 Sobic009G143400--Sobic003G393700 Sobic004G061200 Sobic004G061200 Sobic009G143400--Sobic004G061200 Sobic003G379800 Sobic003G379800 Sobic009G143400--Sobic003G379800 Sobic001G281400 Sobic001G281400 Sobic009G143400--Sobic001G281400 Sobic002G046100 Sobic002G046100 Sobic009G143400--Sobic002G046100 Sobic010G149300 Sobic010G149300 Sobic009G143400--Sobic010G149300 Sobic002G190900 Sobic002G190900 Sobic009G143400--Sobic002G190900 Sobic009G033700 Sobic009G033700 Sobic009G143400--Sobic009G033700
Octagon: transcription factors


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