Gene annotation
Transcriptome id Sobic.004G225900.1
Synonym Sb04g027030
Functional annotation GEM, putative, expressed
UniProt C5XY79
Pfam PF02893
Panther DB PTHR31969 PTHR31969:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G23350 : GRAM domain-containing protein / ABA-responsive protein-related
RAP-DB (Rice) LOC_Os02g42440.1 : GEM, putative, expressed
MaizeGDB (Corn) Zm00025a030929 , Zm00025a010593 , Zm00025a056548 , Zm00025a010594 , Zm00025a032094 , Zm00025a032092 , Zm00025a021015
Brachypodium KQK00478 , KQK00479
Barley HORVU2Hr1G090730.4 , HORVU2Hr1G090730.3 , HORVU2Hr1G090730.2 , HORVU2Hr1G090730.1 , HORVU2Hr1G090740.2 , HORVU2Hr1G090740.1 , HORVU2Hr1G090740.4 , HORVU2Hr1G090740.5 , HORVU6Hr1G059940.10 , HORVU2Hr1G090690.1 , HORVU2Hr1G090690.2 , HORVU6Hr1G059940.9 , HORVU6Hr1G059940.8 , HORVU6Hr1G059940.6 , HORVU6Hr1G059940.5 , HORVU6Hr1G059940.4 , HORVU6Hr1G059940.3 , HORVU6Hr1G059940.2 , HORVU6Hr1G059940.1
Wheat TraesCS6B02G263000 , TraesCS2B02G392100 , TraesCS6D02G216500 , TraesCS2B02G392400 , TraesCS2B02G392300 , TraesCS6D02G216600 , TraesCS2D02G371400 , TraesCS2D02G371700 , TraesCS2A02G375100 , TraesCS2A02G375200 , TraesCS2D02G371500 , TraesCS2D02G371600 , TraesCS6A02G234300 , TraesCS6A02G234200 , TraesCS2B02G392200 , TraesCS2A02G375300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@NAD dependent epimerase/dehydratase family protein, putative, expressed K10046: GDP-D-mannose 3', 5'-epimerase
2 Sobic.002G017800 expressed protein -
3 Sobic.001G318500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.009G077800 expressed protein -
5 Sobic.002G302500 -(PubMedID : 29147737)@serine/threonine-protein kinase receptor precursor, putative, expressed -
6 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
7 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
8 Sobic.002G004900 transporter family protein, putative, expressed -
9 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
10 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
11 Sobic.004G340900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX70 - F-box domain containing protein, expressed -
12 Sobic.007G087200 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
13 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
14 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
15 Sobic.003G255200 expressed protein -
16 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
17 Sobic.002G125700 similar to Aquaporin PIP2-6(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09872: aquaporin PIP
18 Sobic.002G366600 expressed protein -
19 Sobic.005G018700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@no apical meristem protein, putative, expressed -
20 Sobic.004G101300 expressed protein -


Gene co-expression network
sample Sobic004G225900 Sobic004G225900 Sobic001G247600 Sobic001G247600 Sobic004G225900--Sobic001G247600 Sobic002G017800 Sobic002G017800 Sobic004G225900--Sobic002G017800 Sobic001G318500 Sobic001G318500 Sobic004G225900--Sobic001G318500 Sobic009G077800 Sobic009G077800 Sobic004G225900--Sobic009G077800 Sobic002G302500 Sobic002G302500 Sobic004G225900--Sobic002G302500 Sobic010G270500 Sobic010G270500 Sobic004G225900--Sobic010G270500 Sobic009G111000 Sobic009G111000 Sobic004G225900--Sobic009G111000 Sobic002G004900 Sobic002G004900 Sobic004G225900--Sobic002G004900 Sobic001G325400 Sobic001G325400 Sobic004G225900--Sobic001G325400 Sobic007G184600 Sobic007G184600 Sobic001G247600--Sobic007G184600 Sobic002G200600 Sobic002G200600 Sobic001G247600--Sobic002G200600 Sobic001G247600--Sobic004G225900 Sobic001G247600--Sobic009G077800 Sobic003G417800 Sobic003G417800 Sobic001G247600--Sobic003G417800 Sobic001G119400 Sobic001G119400 Sobic001G247600--Sobic001G119400 Sobic009G139400 Sobic009G139400 Sobic001G247600--Sobic009G139400 Sobic004G205100 Sobic004G205100 Sobic001G247600--Sobic004G205100 Sobic001G177800 Sobic001G177800 Sobic001G247600--Sobic001G177800 Sobic001G367600 Sobic001G367600 Sobic002G017800--Sobic001G367600 Sobic002G017800--Sobic009G111000 Sobic002G017800--Sobic001G318500 Sobic005G018700 Sobic005G018700 Sobic002G017800--Sobic005G018700 Sobic002G017800--Sobic009G077800 Sobic002G055700 Sobic002G055700 Sobic002G017800--Sobic002G055700 Sobic002G017800--Sobic001G325400 Sobic006G103000 Sobic006G103000 Sobic002G017800--Sobic006G103000 Sobic001G500000 Sobic001G500000 Sobic002G017800--Sobic001G500000 Sobic001G318500--Sobic002G004900 Sobic001G318500--Sobic002G017800 Sobic001G318500--Sobic009G111000 Sobic001G318500--Sobic002G302500 Sobic001G318500--Sobic002G055700 Sobic004G203700 Sobic004G203700 Sobic001G318500--Sobic004G203700 Sobic004G148200 Sobic004G148200 Sobic001G318500--Sobic004G148200 Sobic001G318500--Sobic001G367600 Sobic008G027600 Sobic008G027600 Sobic001G318500--Sobic008G027600 Sobic003G297600 Sobic003G297600 Sobic009G077800--Sobic003G297600 Sobic009G077800--Sobic009G139400 Sobic003G393700 Sobic003G393700 Sobic009G077800--Sobic003G393700 Sobic001G070800 Sobic001G070800 Sobic009G077800--Sobic001G070800 Sobic009G077800--Sobic002G055700 Sobic009G077800--Sobic002G017800 Sobic005G029200 Sobic005G029200 Sobic009G077800--Sobic005G029200 Sobic009G077800--Sobic001G325400 Sobic007G087200 Sobic007G087200 Sobic009G077800--Sobic007G087200 Sobic002G353900 Sobic002G353900 Sobic002G302500--Sobic002G353900 Sobic002G302500--Sobic002G017800 Sobic002G302500--Sobic009G077800 Sobic002G302500--Sobic002G055700 Sobic002G302500--Sobic001G318500 Sobic002G338500 Sobic002G338500 Sobic002G302500--Sobic002G338500 Sobic010G156500 Sobic010G156500 Sobic002G302500--Sobic010G156500 Sobic003G364300 Sobic003G364300 Sobic002G302500--Sobic003G364300 Sobic002G302500--Sobic002G004900 Sobic003G007600 Sobic003G007600 Sobic010G270500--Sobic003G007600 Sobic007G151300 Sobic007G151300 Sobic010G270500--Sobic007G151300 Sobic003G299300 Sobic003G299300 Sobic010G270500--Sobic003G299300 Sobic001G304100 Sobic001G304100 Sobic010G270500--Sobic001G304100 Sobic010G270500--Sobic002G017800 Sobic010G270500--Sobic009G111000 Sobic010G270500--Sobic005G018700 Sobic010G270500--Sobic006G103000 Sobic001G050100 Sobic001G050100 Sobic010G270500--Sobic001G050100 Sobic009G111000--Sobic002G017800 Sobic002G176100 Sobic002G176100 Sobic009G111000--Sobic002G176100 Sobic009G111000--Sobic001G367600 Sobic003G417200 Sobic003G417200 Sobic009G111000--Sobic003G417200 Sobic009G111000--Sobic001G325400 Sobic003G426400 Sobic003G426400 Sobic009G111000--Sobic003G426400 Sobic009G111000--Sobic002G055700 Sobic009G111000--Sobic001G500000 Sobic003G319500 Sobic003G319500 Sobic009G111000--Sobic003G319500 Sobic002G004900--Sobic001G318500 Sobic008G172600 Sobic008G172600 Sobic002G004900--Sobic008G172600 Sobic002G004900--Sobic002G017800 Sobic003G280200 Sobic003G280200 Sobic002G004900--Sobic003G280200 Sobic001G503100 Sobic001G503100 Sobic002G004900--Sobic001G503100 Sobic002G004900--Sobic002G302500 Sobic009G009600 Sobic009G009600 Sobic002G004900--Sobic009G009600 Sobic002G004900--Sobic001G325400 Sobic005G011200 Sobic005G011200 Sobic002G004900--Sobic005G011200 Sobic006G039100 Sobic006G039100 Sobic001G325400--Sobic006G039100 Sobic001G325400--Sobic009G111000 Sobic002G125700 Sobic002G125700 Sobic001G325400--Sobic002G125700 Sobic001G462700 Sobic001G462700 Sobic001G325400--Sobic001G462700 Sobic001G325400--Sobic009G077800 Sobic001G325400--Sobic002G017800 Sobic009G231000 Sobic009G231000 Sobic001G325400--Sobic009G231000 Sobic001G325400--Sobic007G087200 Sobic003G117600 Sobic003G117600 Sobic001G325400--Sobic003G117600
Octagon: transcription factors


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