Gene annotation
Transcriptome id Sobic.002G366600.1
Synonym Sb02g038570
Functional annotation expressed protein
UniProt C5XDU2
Pfam -
Panther DB PTHR35297 PTHR35297:SF3
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g46830.1 : expressed protein
MaizeGDB (Corn) Zm00025a048683
Brachypodium -
Barley -
Wheat -
Populus -


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cDNA sequences
Sobic.002G366600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G213700 GDU1, putative, expressed -
2 Sobic.009G077800 expressed protein -
3 Sobic.009G139400 expressed protein -
4 Sobic.007G184600 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e
5 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
6 Sobic.002G017800 expressed protein -
7 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
8 Sobic.009G231000 - -
9 Sobic.005G183100 sulfotransferase domain containing protein, expressed -
10 Sobic.006G039100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
11 Sobic.002G034800 - -
12 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
13 Sobic.007G025500 amino acid transporter, putative, expressed -
14 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
15 Sobic.004G052300 - -
16 Sobic.002G302500 -(PubMedID : 29147737)@serine/threonine-protein kinase receptor precursor, putative, expressed -
17 Sobic.003G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
18 Sobic.010G063801 - K02924: RP-L39e, large subunit ribosomal protein L39e
19 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -


Gene co-expression network
sample Sobic002G366600 Sobic002G366600 Sobic010G213700 Sobic010G213700 Sobic002G366600--Sobic010G213700 Sobic009G077800 Sobic009G077800 Sobic002G366600--Sobic009G077800 Sobic009G139400 Sobic009G139400 Sobic002G366600--Sobic009G139400 Sobic007G184600 Sobic007G184600 Sobic002G366600--Sobic007G184600 Sobic003G297600 Sobic003G297600 Sobic002G366600--Sobic003G297600 Sobic002G017800 Sobic002G017800 Sobic002G366600--Sobic002G017800 Sobic002G055700 Sobic002G055700 Sobic002G366600--Sobic002G055700 Sobic009G231000 Sobic009G231000 Sobic002G366600--Sobic009G231000 Sobic005G183100 Sobic005G183100 Sobic002G366600--Sobic005G183100 Sobic005G029200 Sobic005G029200 Sobic010G213700--Sobic005G029200 Sobic010G213700--Sobic002G366600 Sobic001G119400 Sobic001G119400 Sobic010G213700--Sobic001G119400 Sobic010G213700--Sobic009G139400 Sobic004G148200 Sobic004G148200 Sobic010G213700--Sobic004G148200 Sobic010G213700--Sobic003G297600 Sobic002G415100 Sobic002G415100 Sobic010G213700--Sobic002G415100 Sobic004G189400 Sobic004G189400 Sobic010G213700--Sobic004G189400 Sobic003G280200 Sobic003G280200 Sobic010G213700--Sobic003G280200 Sobic009G077800--Sobic003G297600 Sobic009G077800--Sobic009G139400 Sobic003G393700 Sobic003G393700 Sobic009G077800--Sobic003G393700 Sobic001G070800 Sobic001G070800 Sobic009G077800--Sobic001G070800 Sobic009G077800--Sobic002G055700 Sobic009G077800--Sobic002G017800 Sobic009G077800--Sobic005G029200 Sobic001G325400 Sobic001G325400 Sobic009G077800--Sobic001G325400 Sobic007G087200 Sobic007G087200 Sobic009G077800--Sobic007G087200 Sobic009G139400--Sobic009G077800 Sobic009G139400--Sobic003G297600 Sobic009G139400--Sobic001G119400 Sobic001G177800 Sobic001G177800 Sobic009G139400--Sobic001G177800 Sobic009G139400--Sobic007G184600 Sobic010G066700 Sobic010G066700 Sobic009G139400--Sobic010G066700 Sobic002G353900 Sobic002G353900 Sobic009G139400--Sobic002G353900 Sobic003G382600 Sobic003G382600 Sobic009G139400--Sobic003G382600 Sobic009G139400--Sobic005G029200 Sobic002G200600 Sobic002G200600 Sobic007G184600--Sobic002G200600 Sobic001G374700 Sobic001G374700 Sobic007G184600--Sobic001G374700 Sobic001G402050 Sobic001G402050 Sobic007G184600--Sobic001G402050 Sobic002G081600 Sobic002G081600 Sobic007G184600--Sobic002G081600 Sobic001G493001 Sobic001G493001 Sobic007G184600--Sobic001G493001 Sobic007G184600--Sobic001G177800 Sobic006G067800 Sobic006G067800 Sobic007G184600--Sobic006G067800 Sobic003G322400 Sobic003G322400 Sobic007G184600--Sobic003G322400 Sobic003G346600 Sobic003G346600 Sobic007G184600--Sobic003G346600 Sobic003G297600--Sobic009G077800 Sobic003G297600--Sobic009G139400 Sobic003G297600--Sobic001G070800 Sobic003G297600--Sobic005G029200 Sobic003G297600--Sobic004G189400 Sobic008G050600 Sobic008G050600 Sobic003G297600--Sobic008G050600 Sobic001G317200 Sobic001G317200 Sobic003G297600--Sobic001G317200 Sobic005G091500 Sobic005G091500 Sobic003G297600--Sobic005G091500 Sobic003G297600--Sobic002G055700 Sobic001G367600 Sobic001G367600 Sobic002G017800--Sobic001G367600 Sobic009G111000 Sobic009G111000 Sobic002G017800--Sobic009G111000 Sobic001G318500 Sobic001G318500 Sobic002G017800--Sobic001G318500 Sobic005G018700 Sobic005G018700 Sobic002G017800--Sobic005G018700 Sobic002G017800--Sobic009G077800 Sobic002G017800--Sobic002G055700 Sobic002G017800--Sobic001G325400 Sobic006G103000 Sobic006G103000 Sobic002G017800--Sobic006G103000 Sobic001G500000 Sobic001G500000 Sobic002G017800--Sobic001G500000 Sobic003G303100 Sobic003G303100 Sobic002G055700--Sobic003G303100 Sobic002G055700--Sobic003G382600 Sobic004G237800 Sobic004G237800 Sobic002G055700--Sobic004G237800 Sobic003G426400 Sobic003G426400 Sobic002G055700--Sobic003G426400 Sobic002G055700--Sobic002G353900 Sobic002G055700--Sobic004G148200 Sobic002G055700--Sobic004G189400 Sobic002G338500 Sobic002G338500 Sobic002G055700--Sobic002G338500 Sobic002G055700--Sobic001G367600 Sobic003G364300 Sobic003G364300 Sobic009G231000--Sobic003G364300 Sobic010G259600 Sobic010G259600 Sobic009G231000--Sobic010G259600 Sobic009G231000--Sobic001G325400 Sobic006G039100 Sobic006G039100 Sobic009G231000--Sobic006G039100 Sobic002G125700 Sobic002G125700 Sobic009G231000--Sobic002G125700 Sobic009G231000--Sobic002G055700 Sobic003G087300 Sobic003G087300 Sobic009G231000--Sobic003G087300 Sobic009G231000--Sobic003G297600 Sobic010G156500 Sobic010G156500 Sobic009G231000--Sobic010G156500 Sobic005G183100--Sobic002G366600 Sobic005G183100--Sobic002G415100 Sobic003G255200 Sobic003G255200 Sobic005G183100--Sobic003G255200 Sobic007G025500 Sobic007G025500 Sobic005G183100--Sobic007G025500 Sobic005G183100--Sobic009G231000 Sobic004G046200 Sobic004G046200 Sobic005G183100--Sobic004G046200 Sobic003G062600 Sobic003G062600 Sobic005G183100--Sobic003G062600 Sobic005G183100--Sobic010G259600 Sobic005G183100--Sobic010G213700
Octagon: transcription factors


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