Gene annotation
Transcriptome id Sobic.006G039100.1
Synonym Sb06g007120
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed
UniProt C5YDS9
Pfam -
Panther DB PTHR34998 PTHR34998:SF2
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os04g28850.1 : RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley HORVU3Hr1G108330.1
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
2 Sobic.009G231000 - -
3 Sobic.001G462700 expressed protein -
4 Sobic.004G189500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
5 Sobic.003G087300 nuclease PA3, putative, expressed -
6 Sobic.002G416600 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.002G366600 expressed protein -
8 Sobic.004G148100 Cupin domain containing protein, expressed -
9 Sobic.009G077800 expressed protein -
10 Sobic.002G125700 similar to Aquaporin PIP2-6(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09872: aquaporin PIP
11 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
12 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
13 Sobic.002G017800 expressed protein -
14 Sobic.002G004900 transporter family protein, putative, expressed -
15 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
16 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
17 Sobic.004G148200 Cupin domain containing protein, expressed -
18 Sobic.002G415100 POEI50 - Pollen Ole e I allergen and extensin family protein precursor, expressed -
19 Sobic.002G247600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Os9bglu30 - beta-glucosidase, similar to Os4bglu12 exoglucanase, expressed K01188: beta-glucosidase
20 Sobic.010G239300 oryzain beta chain precursor, putative, expressed -


Gene co-expression network
sample Sobic006G039100 Sobic006G039100 Sobic001G325400 Sobic001G325400 Sobic006G039100--Sobic001G325400 Sobic009G231000 Sobic009G231000 Sobic006G039100--Sobic009G231000 Sobic001G462700 Sobic001G462700 Sobic006G039100--Sobic001G462700 Sobic004G189500 Sobic004G189500 Sobic006G039100--Sobic004G189500 Sobic003G087300 Sobic003G087300 Sobic006G039100--Sobic003G087300 Sobic002G416600 Sobic002G416600 Sobic006G039100--Sobic002G416600 Sobic002G366600 Sobic002G366600 Sobic006G039100--Sobic002G366600 Sobic004G148100 Sobic004G148100 Sobic006G039100--Sobic004G148100 Sobic009G077800 Sobic009G077800 Sobic006G039100--Sobic009G077800 Sobic001G325400--Sobic006G039100 Sobic009G111000 Sobic009G111000 Sobic001G325400--Sobic009G111000 Sobic002G125700 Sobic002G125700 Sobic001G325400--Sobic002G125700 Sobic001G325400--Sobic001G462700 Sobic001G325400--Sobic009G077800 Sobic002G017800 Sobic002G017800 Sobic001G325400--Sobic002G017800 Sobic001G325400--Sobic009G231000 Sobic007G087200 Sobic007G087200 Sobic001G325400--Sobic007G087200 Sobic003G117600 Sobic003G117600 Sobic001G325400--Sobic003G117600 Sobic003G364300 Sobic003G364300 Sobic009G231000--Sobic003G364300 Sobic010G259600 Sobic010G259600 Sobic009G231000--Sobic010G259600 Sobic009G231000--Sobic001G325400 Sobic009G231000--Sobic006G039100 Sobic009G231000--Sobic002G125700 Sobic002G055700 Sobic002G055700 Sobic009G231000--Sobic002G055700 Sobic009G231000--Sobic003G087300 Sobic003G297600 Sobic003G297600 Sobic009G231000--Sobic003G297600 Sobic010G156500 Sobic010G156500 Sobic009G231000--Sobic010G156500 Sobic002G247600 Sobic002G247600 Sobic001G462700--Sobic002G247600 Sobic001G462700--Sobic001G325400 Sobic001G462700--Sobic006G039100 Sobic001G462700--Sobic009G111000 Sobic007G204700 Sobic007G204700 Sobic001G462700--Sobic007G204700 Sobic001G462700--Sobic003G117600 Sobic010G008400 Sobic010G008400 Sobic001G462700--Sobic010G008400 Sobic001G331200 Sobic001G331200 Sobic001G462700--Sobic001G331200 Sobic004G046200 Sobic004G046200 Sobic001G462700--Sobic004G046200 Sobic004G148200 Sobic004G148200 Sobic004G189500--Sobic004G148200 Sobic004G189500--Sobic002G055700 Sobic004G189400 Sobic004G189400 Sobic004G189500--Sobic004G189400 Sobic005G091500 Sobic005G091500 Sobic004G189500--Sobic005G091500 Sobic004G189500--Sobic006G039100 Sobic004G189500--Sobic003G297600 Sobic005G029200 Sobic005G029200 Sobic004G189500--Sobic005G029200 Sobic004G189500--Sobic009G231000 Sobic010G213700 Sobic010G213700 Sobic004G189500--Sobic010G213700 Sobic003G087300--Sobic002G416600 Sobic010G052700 Sobic010G052700 Sobic003G087300--Sobic010G052700 Sobic010G239300 Sobic010G239300 Sobic003G087300--Sobic010G239300 Sobic007G141500 Sobic007G141500 Sobic003G087300--Sobic007G141500 Sobic003G087300--Sobic006G039100 Sobic004G166700 Sobic004G166700 Sobic003G087300--Sobic004G166700 Sobic003G087300--Sobic009G231000 Sobic003G087300--Sobic002G125700 Sobic001G252300 Sobic001G252300 Sobic003G087300--Sobic001G252300 Sobic002G416600--Sobic003G087300 Sobic005G051200 Sobic005G051200 Sobic002G416600--Sobic005G051200 Sobic001G317200 Sobic001G317200 Sobic002G416600--Sobic001G317200 Sobic001G025300 Sobic001G025300 Sobic002G416600--Sobic001G025300 Sobic001G070800 Sobic001G070800 Sobic002G416600--Sobic001G070800 Sobic002G416600--Sobic004G166700 Sobic008G050600 Sobic008G050600 Sobic002G416600--Sobic008G050600 Sobic002G416600--Sobic001G252300 Sobic002G416600--Sobic010G239300 Sobic002G366600--Sobic010G213700 Sobic002G366600--Sobic009G077800 Sobic009G139400 Sobic009G139400 Sobic002G366600--Sobic009G139400 Sobic007G184600 Sobic007G184600 Sobic002G366600--Sobic007G184600 Sobic002G366600--Sobic003G297600 Sobic002G366600--Sobic002G017800 Sobic002G366600--Sobic002G055700 Sobic002G366600--Sobic009G231000 Sobic005G183100 Sobic005G183100 Sobic002G366600--Sobic005G183100 Sobic002G040900 Sobic002G040900 Sobic004G148100--Sobic002G040900 Sobic006G162100 Sobic006G162100 Sobic004G148100--Sobic006G162100 Sobic006G113500 Sobic006G113500 Sobic004G148100--Sobic006G113500 Sobic005G177600 Sobic005G177600 Sobic004G148100--Sobic005G177600 Sobic007G215600 Sobic007G215600 Sobic004G148100--Sobic007G215600 Sobic001G054500 Sobic001G054500 Sobic004G148100--Sobic001G054500 Sobic004G148100--Sobic006G039100 Sobic002G042000 Sobic002G042000 Sobic004G148100--Sobic002G042000 Sobic007G008100 Sobic007G008100 Sobic004G148100--Sobic007G008100 Sobic009G077800--Sobic003G297600 Sobic009G077800--Sobic009G139400 Sobic003G393700 Sobic003G393700 Sobic009G077800--Sobic003G393700 Sobic009G077800--Sobic001G070800 Sobic009G077800--Sobic002G055700 Sobic009G077800--Sobic002G017800 Sobic009G077800--Sobic005G029200 Sobic009G077800--Sobic001G325400 Sobic009G077800--Sobic007G087200
Octagon: transcription factors


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