Gene annotation
Transcriptome id Sobic.002G125700.2,Sobic.002G125700.3
Synonym PIP2, PIP2B, Sb02g010830, 2
Functional annotation similar to Aquaporin PIP2-6 (PubMedID : 29862293)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
aquaporin protein, putative, expressed
UniProt C5X555
Pfam PF00230
Panther DB PTHR19139 PTHR19139:SF137
NCBI CDD KOG0223; Aquaporin (major intrinsic protein family)
KEGG Orthology K09872; aquaporin PIP
Gene Ontology GO:0016020; membrane GO:0006810transport GO:0005215transporter activity


Orthologs (automatic annotation)
TAIR AT2G37170 : plasma membrane intrinsic protein 2
RAP-DB (Rice) LOC_Os07g26630.1 : aquaporin protein, putative, expressed
MaizeGDB (Corn) Zm00025a021083 , Zm00025a021439 , Zm00025a045837 , Zm00025a032250 , Zm00025a049510 , Zm00025a032042 , Zm00025a010237 , Zm00025a049307 , Zm00025a010642 , Zm00025a013555 , Zm00025a013554
Brachypodium KQJ84016 , KQJ83644 , KQK00428 , KQK16443 , KQK16441
Barley HORVU2Hr1G089820.5 , HORVU2Hr1G089820.4 , HORVU2Hr1G089820.7 , HORVU2Hr1G089820.6 , HORVU2Hr1G089820.1 , HORVU2Hr1G089820.3 , HORVU2Hr1G089820.2 , HORVU5Hr1G029550.1 , HORVU5Hr1G029550.2 , HORVU5Hr1G029550.3 , HORVU5Hr1G029550.4 , HORVU5Hr1G029550.5 , HORVU5Hr1G029550.6 , HORVU5Hr1G029550.7 , HORVU2Hr1G010990.4 , HORVU2Hr1G010990.3 , HORVU2Hr1G010990.2 , HORVU2Hr1G010990.1 , HORVU6Hr1G092960.12 , HORVU6Hr1G092960.13 , HORVU6Hr1G092960.10 , HORVU6Hr1G058930.9 , HORVU6Hr1G058930.8 , HORVU6Hr1G058930.4 , HORVU6Hr1G058930.1 , HORVU0Hr1G011280.6 , HORVU0Hr1G011280.4 , HORVU0Hr1G011280.5 , HORVU0Hr1G011280.2 , HORVU0Hr1G011280.3 , HORVU0Hr1G011280.1 , HORVU2Hr1G089940.14 , HORVU2Hr1G089940.15 , HORVU2Hr1G089940.16 , HORVU2Hr1G089940.17 , HORVU2Hr1G089940.10 , HORVU2Hr1G089940.11 , HORVU2Hr1G089940.12 , HORVU2Hr1G089940.13 , HORVU5Hr1G027240.4 , HORVU5Hr1G027240.5 , HORVU5Hr1G027240.2 , HORVU5Hr1G027240.3 , HORVU5Hr1G027240.1 , HORVU6Hr1G058930.20 , HORVU6Hr1G058930.21 , HORVU5Hr1G055200.7 , HORVU5Hr1G055200.6 , HORVU5Hr1G055200.5 , HORVU5Hr1G055200.4 , HORVU5Hr1G055200.3 , HORVU5Hr1G055200.2 , HORVU5Hr1G055200.1 , HORVU5Hr1G055200.8 , HORVU6Hr1G058930.19 , HORVU6Hr1G058930.18 , HORVU2Hr1G089940.20 , HORVU6Hr1G058930.11 , HORVU6Hr1G058930.10 , HORVU6Hr1G058930.13 , HORVU6Hr1G058930.12 , HORVU6Hr1G058930.15 , HORVU6Hr1G058930.14 , HORVU6Hr1G058930.17 , HORVU6Hr1G058930.16 , HORVU6Hr1G092960.4 , HORVU6Hr1G092960.5 , HORVU6Hr1G092960.6 , HORVU2Hr1G038740.11 , HORVU2Hr1G038740.16 , HORVU6Hr1G092960.1 , HORVU2Hr1G038740.18 , HORVU6Hr1G092960.9 , HORVU6Hr1G092970.3 , HORVU6Hr1G092970.2 , HORVU6Hr1G092970.4 , HORVU2Hr1G089820.9 , HORVU2Hr1G089820.8 , HORVU2Hr1G089940.18 , HORVU2Hr1G089940.19 , HORVU2Hr1G089940.6 , HORVU2Hr1G089940.7 , HORVU2Hr1G089940.4 , HORVU2Hr1G089940.5 , HORVU2Hr1G089940.2 , HORVU2Hr1G089940.3 , HORVU2Hr1G089940.1 , HORVU5Hr1G125600.1 , HORVU2Hr1G089940.9 , HORVU2Hr1G038740.8 , HORVU2Hr1G038740.1 , HORVU2Hr1G038740.2 , HORVU2Hr1G038740.3 , HORVU2Hr1G038740.5 , HORVU2Hr1G038740.6 , HORVU2Hr1G038740.7 , HORVU6Hr1G014300.1 , HORVU2Hr1G089940.8 , HORVU2Hr1G089940.21 , HORVU2Hr1G038740.12 , HORVU2Hr1G038740.10 , HORVU6Hr1G092960.7 , HORVU2Hr1G038740.14 , HORVU2Hr1G038740.15
Wheat TraesCS2D02G376100 , TraesCS5D02G185400 , TraesCS7B02G096000 , TraesCS6B02G259000 , TraesCS2B02G605900 , TraesCS4A02G286200 , TraesCS2D02G206300 , TraesCS6D02G389400 , TraesCS7A02G191200 , TraesCS4B02G027600 , TraesCS2A02G198500 , TraesCS6D02G212900 , TraesCS5B02G178700 , TraesCS7D02G192200 , TraesCS6A02G405700 , TraesCS6B02G450000 , TraesCS2D02G404800 , TraesCS2B02G425600 , TraesCS5D02G112500 , TraesCS5A02G181000 , TraesCS2D02G376000 , TraesCS2D02G376000 , TraesCS5A02G100000 , TraesCS2A02G379900 , TraesCS2D02G404800 , TraesCS2B02G396700 , TraesCS2B02G396700 , TraesCS6B02G450200 , TraesCS6A02G222100 , TraesCS2B02G225900 , TraesCS2A02G407700 , TraesCS2A02G407700 , TraesCS2B02G077700 , TraesCS2A02G065700 , TraesCS6A02G405600 , TraesCS6D02G389500 , TraesCS2D02G063900 , TraesCS2A02G379800
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G255200 expressed protein -
2 Sobic.001G503100 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
3 Sobic.003G352300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
4 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
5 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
6 Sobic.007G087200 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
7 Sobic.004G107700 expressed protein -
8 Sobic.009G231000 - -
9 Sobic.010G063000 - -
10 Sobic.004G166700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Beta-fructofuranosidase, cell wall Invertase 2 (Os)"(PubMedID : 27208977)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
11 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
12 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
13 Sobic.006G092500 expressed protein -
14 Sobic.003G087300 nuclease PA3, putative, expressed -
15 Sobic.009G077800 expressed protein -
16 Sobic.007G215900 OsWAK73 - OsWAK receptor-like protein kinase, expressed -
17 Sobic.009G229000 expressed protein -
18 Sobic.002G034800 - -
19 Sobic.006G039100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
20 Sobic.001G449600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@non-symbiotic hemoglobin 2, putative, expressed -


Gene co-expression network
sample Sobic002G125700 Sobic002G125700 Sobic003G255200 Sobic003G255200 Sobic002G125700--Sobic003G255200 Sobic001G503100 Sobic001G503100 Sobic002G125700--Sobic001G503100 Sobic003G352300 Sobic003G352300 Sobic002G125700--Sobic003G352300 Sobic010G259600 Sobic010G259600 Sobic002G125700--Sobic010G259600 Sobic001G325400 Sobic001G325400 Sobic002G125700--Sobic001G325400 Sobic007G087200 Sobic007G087200 Sobic002G125700--Sobic007G087200 Sobic004G107700 Sobic004G107700 Sobic002G125700--Sobic004G107700 Sobic009G231000 Sobic009G231000 Sobic002G125700--Sobic009G231000 Sobic010G063000 Sobic010G063000 Sobic002G125700--Sobic010G063000 Sobic003G255200--Sobic004G107700 Sobic003G255200--Sobic002G125700 Sobic008G172600 Sobic008G172600 Sobic003G255200--Sobic008G172600 Sobic004G046200 Sobic004G046200 Sobic003G255200--Sobic004G046200 Sobic003G255200--Sobic010G259600 Sobic001G449600 Sobic001G449600 Sobic003G255200--Sobic001G449600 Sobic003G255200--Sobic007G087200 Sobic003G255200--Sobic001G503100 Sobic002G034800 Sobic002G034800 Sobic003G255200--Sobic002G034800 Sobic001G503100--Sobic002G125700 Sobic006G277600 Sobic006G277600 Sobic001G503100--Sobic006G277600 Sobic001G503100--Sobic003G352300 Sobic006G125100 Sobic006G125100 Sobic001G503100--Sobic006G125100 Sobic010G052700 Sobic010G052700 Sobic001G503100--Sobic010G052700 Sobic001G503100--Sobic004G107700 Sobic001G503100--Sobic003G255200 Sobic002G004900 Sobic002G004900 Sobic001G503100--Sobic002G004900 Sobic003G255500 Sobic003G255500 Sobic001G503100--Sobic003G255500 Sobic004G205100 Sobic004G205100 Sobic003G352300--Sobic004G205100 Sobic003G352300--Sobic010G259600 Sobic003G352300--Sobic002G125700 Sobic009G159400 Sobic009G159400 Sobic003G352300--Sobic009G159400 Sobic003G352300--Sobic001G503100 Sobic006G092500 Sobic006G092500 Sobic003G352300--Sobic006G092500 Sobic009G183400 Sobic009G183400 Sobic003G352300--Sobic009G183400 Sobic006G099900 Sobic006G099900 Sobic003G352300--Sobic006G099900 Sobic003G417800 Sobic003G417800 Sobic003G352300--Sobic003G417800 Sobic010G259600--Sobic009G159400 Sobic010G259600--Sobic003G352300 Sobic009G234100 Sobic009G234100 Sobic010G259600--Sobic009G234100 Sobic010G259600--Sobic002G125700 Sobic010G259600--Sobic007G087200 Sobic010G259600--Sobic009G231000 Sobic001G435000 Sobic001G435000 Sobic010G259600--Sobic001G435000 Sobic010G259600--Sobic003G255200 Sobic002G017800 Sobic002G017800 Sobic010G259600--Sobic002G017800 Sobic006G039100 Sobic006G039100 Sobic001G325400--Sobic006G039100 Sobic009G111000 Sobic009G111000 Sobic001G325400--Sobic009G111000 Sobic001G325400--Sobic002G125700 Sobic001G462700 Sobic001G462700 Sobic001G325400--Sobic001G462700 Sobic009G077800 Sobic009G077800 Sobic001G325400--Sobic009G077800 Sobic001G325400--Sobic002G017800 Sobic001G325400--Sobic009G231000 Sobic001G325400--Sobic007G087200 Sobic003G117600 Sobic003G117600 Sobic001G325400--Sobic003G117600 Sobic007G087200--Sobic002G125700 Sobic007G087200--Sobic010G259600 Sobic007G087200--Sobic009G077800 Sobic007G087200--Sobic001G325400 Sobic009G139400 Sobic009G139400 Sobic007G087200--Sobic009G139400 Sobic007G087200--Sobic003G255200 Sobic007G087200--Sobic004G046200 Sobic004G101300 Sobic004G101300 Sobic007G087200--Sobic004G101300 Sobic007G087200--Sobic004G107700 Sobic004G107700--Sobic003G255200 Sobic003G437200 Sobic003G437200 Sobic004G107700--Sobic003G437200 Sobic004G107700--Sobic002G125700 Sobic004G107700--Sobic003G417800 Sobic004G107700--Sobic001G503100 Sobic004G107700--Sobic002G034800 Sobic004G107700--Sobic009G139400 Sobic004G107700--Sobic003G352300 Sobic004G176600 Sobic004G176600 Sobic004G107700--Sobic004G176600 Sobic003G364300 Sobic003G364300 Sobic009G231000--Sobic003G364300 Sobic009G231000--Sobic010G259600 Sobic009G231000--Sobic001G325400 Sobic009G231000--Sobic006G039100 Sobic009G231000--Sobic002G125700 Sobic002G055700 Sobic002G055700 Sobic009G231000--Sobic002G055700 Sobic003G087300 Sobic003G087300 Sobic009G231000--Sobic003G087300 Sobic003G297600 Sobic003G297600 Sobic009G231000--Sobic003G297600 Sobic010G156500 Sobic010G156500 Sobic009G231000--Sobic010G156500 Sobic010G063000--Sobic006G125100 Sobic010G063000--Sobic002G125700 Sobic002G213600 Sobic002G213600 Sobic010G063000--Sobic002G213600 Sobic001G237900 Sobic001G237900 Sobic010G063000--Sobic001G237900 Sobic010G063000--Sobic001G503100 Sobic010G001000 Sobic010G001000 Sobic010G063000--Sobic010G001000 Sobic001G161500 Sobic001G161500 Sobic010G063000--Sobic001G161500 Sobic001G318500 Sobic001G318500 Sobic010G063000--Sobic001G318500 Sobic010G063000--Sobic001G325400
Octagon: transcription factors


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