Gene annotation
Transcriptome id Sobic.010G259600.1
Synonym Sb10g029620,
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Protein O-methyltransferase ZRP4 (Os) (PubMedID : 27208977)
transferase family protein, putative, expressed
UniProt C5Z9D9
Pfam PF02458
Panther DB PTHR31642 PTHR31642:SF49
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016747; transferase activity, transferring acyl groups other than amino-acyl groups


Orthologs (automatic annotation)
TAIR AT5G17540 : HXXXD-type acyl-transferase family protein
RAP-DB (Rice) LOC_Os06g49660.1 : transferase family protein, putative, expressed
MaizeGDB (Corn) Zm00025a018443
Brachypodium KQJ99965 , KQK17502
Barley HORVU4Hr1G009300.1 , HORVU7Hr1G095230.4 , HORVU7Hr1G095230.1 , HORVU7Hr1G095230.2 , HORVU7Hr1G095230.3
Wheat TraesCS7D02G401300 , TraesCS7B02G307700 , TraesCS1B02G033700 , TraesCS7B02G307800 , TraesCS7A02G407600 , TraesCS7D02G401000 , TraesCS7A02G407500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
2 Sobic.003G352300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
3 Sobic.009G234100 WRKY49, expressed -
4 Sobic.002G125700 similar to Aquaporin PIP2-6(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09872: aquaporin PIP
5 Sobic.007G087200 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
6 Sobic.009G231000 - -
7 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
8 Sobic.003G255200 expressed protein -
9 Sobic.002G017800 expressed protein -
10 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
11 Sobic.001G139100 expressed protein -
12 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
13 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
14 Sobic.006G092500 expressed protein -
15 Sobic.009G077800 expressed protein -
16 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
17 Sobic.010G066700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein anthranilate N-benzoyltransferase protein 1 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
18 Sobic.004G340900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX70 - F-box domain containing protein, expressed -
19 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
20 Sobic.006G199800 Orthologous gene to AtMYB58 and AtMYB63(PubMedID : 26712107)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant


Gene co-expression network
sample Sobic010G259600 Sobic010G259600 Sobic009G159400 Sobic009G159400 Sobic010G259600--Sobic009G159400 Sobic003G352300 Sobic003G352300 Sobic010G259600--Sobic003G352300 Sobic009G234100 Sobic009G234100 Sobic010G259600--Sobic009G234100 Sobic002G125700 Sobic002G125700 Sobic010G259600--Sobic002G125700 Sobic007G087200 Sobic007G087200 Sobic010G259600--Sobic007G087200 Sobic009G231000 Sobic009G231000 Sobic010G259600--Sobic009G231000 Sobic001G435000 Sobic001G435000 Sobic010G259600--Sobic001G435000 Sobic003G255200 Sobic003G255200 Sobic010G259600--Sobic003G255200 Sobic002G017800 Sobic002G017800 Sobic010G259600--Sobic002G017800 Sobic001G038900 Sobic001G038900 Sobic009G159400--Sobic001G038900 Sobic009G159400--Sobic001G435000 Sobic004G321300 Sobic004G321300 Sobic009G159400--Sobic004G321300 Sobic003G345100 Sobic003G345100 Sobic009G159400--Sobic003G345100 Sobic004G208700 Sobic004G208700 Sobic009G159400--Sobic004G208700 Sobic001G140900 Sobic001G140900 Sobic009G159400--Sobic001G140900 Sobic008G050600 Sobic008G050600 Sobic009G159400--Sobic008G050600 Sobic009G159400--Sobic010G259600 Sobic004G237800 Sobic004G237800 Sobic009G159400--Sobic004G237800 Sobic004G205100 Sobic004G205100 Sobic003G352300--Sobic004G205100 Sobic003G352300--Sobic010G259600 Sobic003G352300--Sobic002G125700 Sobic003G352300--Sobic009G159400 Sobic001G503100 Sobic001G503100 Sobic003G352300--Sobic001G503100 Sobic006G092500 Sobic006G092500 Sobic003G352300--Sobic006G092500 Sobic009G183400 Sobic009G183400 Sobic003G352300--Sobic009G183400 Sobic006G099900 Sobic006G099900 Sobic003G352300--Sobic006G099900 Sobic003G417800 Sobic003G417800 Sobic003G352300--Sobic003G417800 Sobic009G234100--Sobic004G208700 Sobic005G063100 Sobic005G063100 Sobic009G234100--Sobic005G063100 Sobic009G234100--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic009G234100--Sobic003G286600 Sobic009G234100--Sobic001G435000 Sobic009G234100--Sobic008G050600 Sobic005G099000 Sobic005G099000 Sobic009G234100--Sobic005G099000 Sobic007G155000 Sobic007G155000 Sobic009G234100--Sobic007G155000 Sobic009G234100--Sobic010G259600 Sobic002G125700--Sobic003G255200 Sobic002G125700--Sobic001G503100 Sobic002G125700--Sobic003G352300 Sobic002G125700--Sobic010G259600 Sobic001G325400 Sobic001G325400 Sobic002G125700--Sobic001G325400 Sobic002G125700--Sobic007G087200 Sobic004G107700 Sobic004G107700 Sobic002G125700--Sobic004G107700 Sobic002G125700--Sobic009G231000 Sobic010G063000 Sobic010G063000 Sobic002G125700--Sobic010G063000 Sobic007G087200--Sobic002G125700 Sobic007G087200--Sobic010G259600 Sobic009G077800 Sobic009G077800 Sobic007G087200--Sobic009G077800 Sobic007G087200--Sobic001G325400 Sobic009G139400 Sobic009G139400 Sobic007G087200--Sobic009G139400 Sobic007G087200--Sobic003G255200 Sobic004G046200 Sobic004G046200 Sobic007G087200--Sobic004G046200 Sobic004G101300 Sobic004G101300 Sobic007G087200--Sobic004G101300 Sobic007G087200--Sobic004G107700 Sobic003G364300 Sobic003G364300 Sobic009G231000--Sobic003G364300 Sobic009G231000--Sobic010G259600 Sobic009G231000--Sobic001G325400 Sobic006G039100 Sobic006G039100 Sobic009G231000--Sobic006G039100 Sobic009G231000--Sobic002G125700 Sobic002G055700 Sobic002G055700 Sobic009G231000--Sobic002G055700 Sobic003G087300 Sobic003G087300 Sobic009G231000--Sobic003G087300 Sobic003G297600 Sobic003G297600 Sobic009G231000--Sobic003G297600 Sobic010G156500 Sobic010G156500 Sobic009G231000--Sobic010G156500 Sobic001G435000--Sobic004G208700 Sobic004G229800 Sobic004G229800 Sobic001G435000--Sobic004G229800 Sobic001G435000--Sobic009G159400 Sobic001G435000--Sobic007G155000 Sobic001G435000--Sobic003G345100 Sobic001G435000--Sobic005G063100 Sobic001G435000--Sobic005G099000 Sobic001G435000--Sobic008G050600 Sobic001G435000--Sobic001G140900 Sobic003G255200--Sobic004G107700 Sobic003G255200--Sobic002G125700 Sobic008G172600 Sobic008G172600 Sobic003G255200--Sobic008G172600 Sobic003G255200--Sobic004G046200 Sobic003G255200--Sobic010G259600 Sobic001G449600 Sobic001G449600 Sobic003G255200--Sobic001G449600 Sobic003G255200--Sobic007G087200 Sobic003G255200--Sobic001G503100 Sobic002G034800 Sobic002G034800 Sobic003G255200--Sobic002G034800 Sobic001G367600 Sobic001G367600 Sobic002G017800--Sobic001G367600 Sobic009G111000 Sobic009G111000 Sobic002G017800--Sobic009G111000 Sobic001G318500 Sobic001G318500 Sobic002G017800--Sobic001G318500 Sobic005G018700 Sobic005G018700 Sobic002G017800--Sobic005G018700 Sobic002G017800--Sobic009G077800 Sobic002G017800--Sobic002G055700 Sobic002G017800--Sobic001G325400 Sobic006G103000 Sobic006G103000 Sobic002G017800--Sobic006G103000 Sobic001G500000 Sobic001G500000 Sobic002G017800--Sobic001G500000
Octagon: transcription factors


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