Gene annotation
Transcriptome id Sobic.001G435000.1
Synonym Sb01g040930
Functional annotation gibberellin receptor GID1L2, putative, expressed
UniProt Q9XE82 , C5WQW5
Pfam PF07859
Panther DB PTHR23024 PTHR23024:SF177
NCBI CDD KOG1515; Arylacetamide deacetylase
KEGG Orthology -
Gene Ontology GO:0016787; hydrolase activity GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT2G45600 : alpha/beta-Hydrolases superfamily protein
RAP-DB (Rice) LOC_Os03g14730.1 : gibberellin receptor GID1L2, putative, expressed
MaizeGDB (Corn) Zm00025a045069 , Zm00025a001609 , Zm00025a016606
Brachypodium KQK22538
Barley HORVU4Hr1G062730.4 , HORVU4Hr1G062730.1 , HORVU4Hr1G062730.2 , HORVU4Hr1G062730.3
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
2 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
3 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
4 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
5 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
6 Sobic.005G063100 expressed protein -
7 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -
8 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
9 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
10 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
11 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
12 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.009G234100 WRKY49, expressed -
14 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
15 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
16 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
17 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
18 Sobic.006G234800 expressed protein -
19 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G435000 Sobic001G435000 Sobic004G208700 Sobic004G208700 Sobic001G435000--Sobic004G208700 Sobic004G229800 Sobic004G229800 Sobic001G435000--Sobic004G229800 Sobic009G159400 Sobic009G159400 Sobic001G435000--Sobic009G159400 Sobic007G155000 Sobic007G155000 Sobic001G435000--Sobic007G155000 Sobic003G345100 Sobic003G345100 Sobic001G435000--Sobic003G345100 Sobic005G063100 Sobic005G063100 Sobic001G435000--Sobic005G063100 Sobic005G099000 Sobic005G099000 Sobic001G435000--Sobic005G099000 Sobic008G050600 Sobic008G050600 Sobic001G435000--Sobic008G050600 Sobic001G140900 Sobic001G140900 Sobic001G435000--Sobic001G140900 Sobic009G234100 Sobic009G234100 Sobic004G208700--Sobic009G234100 Sobic004G208700--Sobic001G435000 Sobic004G208700--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic004G208700--Sobic003G286600 Sobic004G208700--Sobic008G050600 Sobic009G164600 Sobic009G164600 Sobic004G208700--Sobic009G164600 Sobic004G208700--Sobic009G159400 Sobic004G208700--Sobic005G063100 Sobic004G208700--Sobic007G155000 Sobic004G229800--Sobic001G435000 Sobic007G036900 Sobic007G036900 Sobic004G229800--Sobic007G036900 Sobic001G018300 Sobic001G018300 Sobic004G229800--Sobic001G018300 Sobic002G336600 Sobic002G336600 Sobic004G229800--Sobic002G336600 Sobic004G141200 Sobic004G141200 Sobic004G229800--Sobic004G141200 Sobic002G188900 Sobic002G188900 Sobic004G229800--Sobic002G188900 Sobic004G229800--Sobic004G208700 Sobic004G004500 Sobic004G004500 Sobic004G229800--Sobic004G004500 Sobic002G140400 Sobic002G140400 Sobic004G229800--Sobic002G140400 Sobic001G038900 Sobic001G038900 Sobic009G159400--Sobic001G038900 Sobic009G159400--Sobic001G435000 Sobic004G321300 Sobic004G321300 Sobic009G159400--Sobic004G321300 Sobic009G159400--Sobic003G345100 Sobic009G159400--Sobic004G208700 Sobic009G159400--Sobic001G140900 Sobic009G159400--Sobic008G050600 Sobic010G259600 Sobic010G259600 Sobic009G159400--Sobic010G259600 Sobic004G237800 Sobic004G237800 Sobic009G159400--Sobic004G237800 Sobic007G155000--Sobic001G435000 Sobic007G155000--Sobic004G208700 Sobic007G155000--Sobic009G234100 Sobic007G155000--Sobic009G159400 Sobic007G155000--Sobic002G140400 Sobic007G155000--Sobic004G229800 Sobic007G155000--Sobic001G038900 Sobic010G066700 Sobic010G066700 Sobic007G155000--Sobic010G066700 Sobic007G155000--Sobic010G259600 Sobic003G345100--Sobic008G050600 Sobic003G345100--Sobic005G063100 Sobic003G345100--Sobic009G164600 Sobic003G345100--Sobic001G140900 Sobic003G345100--Sobic004G208700 Sobic003G345100--Sobic005G099000 Sobic003G345100--Sobic009G159400 Sobic003G369100 Sobic003G369100 Sobic003G345100--Sobic003G369100 Sobic003G345100--Sobic001G435000 Sobic005G063100--Sobic008G050600 Sobic005G063100--Sobic003G345100 Sobic005G063100--Sobic003G286600 Sobic005G063100--Sobic001G140900 Sobic005G063100--Sobic005G099000 Sobic005G063100--Sobic009G234100 Sobic005G091500 Sobic005G091500 Sobic005G063100--Sobic005G091500 Sobic005G063100--Sobic004G208700 Sobic005G063100--Sobic001G435000 Sobic005G099000--Sobic005G063100 Sobic005G099000--Sobic003G345100 Sobic003G116800 Sobic003G116800 Sobic005G099000--Sobic003G116800 Sobic005G099000--Sobic004G141200 Sobic001G169500 Sobic001G169500 Sobic005G099000--Sobic001G169500 Sobic005G099000--Sobic001G435000 Sobic005G099000--Sobic004G208700 Sobic005G011300 Sobic005G011300 Sobic005G099000--Sobic005G011300 Sobic001G108200 Sobic001G108200 Sobic005G099000--Sobic001G108200 Sobic008G050600--Sobic003G345100 Sobic008G050600--Sobic001G140900 Sobic008G050600--Sobic005G063100 Sobic008G050600--Sobic003G286600 Sobic008G050600--Sobic009G164600 Sobic008G050600--Sobic001G038900 Sobic008G136400 Sobic008G136400 Sobic008G050600--Sobic008G136400 Sobic004G189400 Sobic004G189400 Sobic008G050600--Sobic004G189400 Sobic005G051200 Sobic005G051200 Sobic008G050600--Sobic005G051200 Sobic001G140900--Sobic008G050600 Sobic001G140900--Sobic003G345100 Sobic001G140900--Sobic001G038900 Sobic001G140900--Sobic005G063100 Sobic004G100700 Sobic004G100700 Sobic001G140900--Sobic004G100700 Sobic001G140900--Sobic003G369100 Sobic001G367600 Sobic001G367600 Sobic001G140900--Sobic001G367600 Sobic001G140900--Sobic008G136400 Sobic001G140900--Sobic004G141200
Octagon: transcription factors


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