Gene annotation
Transcriptome id Sobic.004G141200.1
Synonym C4H, Sb04g017460, CYP73A5, REF3, ATC4H
Functional annotation cytochrome P450, putative, expressed
UniProt C5Y145
Pfam PF00067
Panther DB PTHR24298 PTHR24298:SF149
NCBI CDD KOG0156; Cytochrome P450 CYP2 subfamily
KEGG Orthology K00487; trans-cinnamate 4-monooxygenase
Gene Ontology GO:0016705; oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen GO:0005506iron ion binding


Orthologs (automatic annotation)
TAIR AT2G30490 : cinnamate-4-hydroxylase
RAP-DB (Rice) LOC_Os02g26810.1 : cytochrome P450, putative, expressed
MaizeGDB (Corn) Zm00025a039769 , Zm00025a036914 , Zm00025a043283 , Zm00025a020303
Brachypodium KQK10342 , KQJ99419 , KQK06925
Barley HORVU7Hr1G093630.2 , HORVU7Hr1G093630.3 , HORVU7Hr1G093630.1 , HORVU3Hr1G025920.8 , HORVU3Hr1G025920.7 , HORVU3Hr1G025920.6 , HORVU3Hr1G025920.5 , HORVU3Hr1G025920.4 , HORVU3Hr1G025920.3 , HORVU3Hr1G025920.2 , HORVU4Hr1G087630.5 , HORVU4Hr1G087630.6 , HORVU4Hr1G087630.7 , HORVU4Hr1G087630.1 , HORVU4Hr1G087630.2 , HORVU4Hr1G087630.3 , HORVU3Hr1G080830.4 , HORVU3Hr1G080830.1 , HORVU3Hr1G080830.2 , HORVU3Hr1G080830.3 , HORVU1Hr1G087140.1
Wheat TraesCS7A02G398900 , TraesCS7A02G398900 , TraesCS4B02G365100 , TraesCS3B02G375100 , TraesCS3A02G342900 , TraesCS3D02G336900 , TraesCS3D02G136900 , TraesCS3B02G154000 , TraesCS7A02G522800 , TraesCS7D02G512000 , TraesCS2D02G300200 , TraesCS3D02G336900 , TraesCSU02G138300 , TraesCS5A02G534000 , TraesCS3A02G136100
Populus -


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cDNA sequences
Sobic.004G141200


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G369100 AP2 domain containing protein, expressed -
2 Sobic.001G108200 expressed protein -
3 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
4 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
5 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
6 Sobic.004G304625 - K15095: (+)-neomenthol dehydrogenase
7 Sobic.001G138600 VQ domain containing protein, putative, expressed -
8 Sobic.001G391500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
9 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
10 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.003G382800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
12 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
13 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -
14 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
15 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
16 Sobic.001G308300 expressed protein -
17 Sobic.007G214600 EF hand family protein, putative, expressed -
18 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
19 Sobic.003G364600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
20 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic004G141200 Sobic004G141200 Sobic003G369100 Sobic003G369100 Sobic004G141200--Sobic003G369100 Sobic001G108200 Sobic001G108200 Sobic004G141200--Sobic001G108200 Sobic007G074000 Sobic007G074000 Sobic004G141200--Sobic007G074000 Sobic003G393900 Sobic003G393900 Sobic004G141200--Sobic003G393900 Sobic001G459800 Sobic001G459800 Sobic004G141200--Sobic001G459800 Sobic004G304625 Sobic004G304625 Sobic004G141200--Sobic004G304625 Sobic001G138600 Sobic001G138600 Sobic004G141200--Sobic001G138600 Sobic001G391500 Sobic001G391500 Sobic004G141200--Sobic001G391500 Sobic004G100700 Sobic004G100700 Sobic004G141200--Sobic004G100700 Sobic003G369100--Sobic004G141200 Sobic003G369100--Sobic007G074000 Sobic003G369100--Sobic001G138600 Sobic003G369100--Sobic001G108200 Sobic001G140900 Sobic001G140900 Sobic003G369100--Sobic001G140900 Sobic001G112200 Sobic001G112200 Sobic003G369100--Sobic001G112200 Sobic003G345100 Sobic003G345100 Sobic003G369100--Sobic003G345100 Sobic008G050600 Sobic008G050600 Sobic003G369100--Sobic008G050600 Sobic001G308300 Sobic001G308300 Sobic003G369100--Sobic001G308300 Sobic001G108200--Sobic004G141200 Sobic001G108200--Sobic003G393900 Sobic001G108200--Sobic004G100700 Sobic001G108200--Sobic003G369100 Sobic003G086600 Sobic003G086600 Sobic001G108200--Sobic003G086600 Sobic003G355100 Sobic003G355100 Sobic001G108200--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic001G108200--Sobic007G214600 Sobic003G382800 Sobic003G382800 Sobic001G108200--Sobic003G382800 Sobic005G099000 Sobic005G099000 Sobic001G108200--Sobic005G099000 Sobic007G074000--Sobic003G369100 Sobic007G074000--Sobic004G141200 Sobic004G237800 Sobic004G237800 Sobic007G074000--Sobic004G237800 Sobic002G140400 Sobic002G140400 Sobic007G074000--Sobic002G140400 Sobic003G228900 Sobic003G228900 Sobic007G074000--Sobic003G228900 Sobic002G336600 Sobic002G336600 Sobic007G074000--Sobic002G336600 Sobic003G364600 Sobic003G364600 Sobic007G074000--Sobic003G364600 Sobic007G074000--Sobic001G138600 Sobic009G247900 Sobic009G247900 Sobic007G074000--Sobic009G247900 Sobic003G393900--Sobic004G141200 Sobic003G393900--Sobic001G108200 Sobic003G393900--Sobic001G459800 Sobic003G393900--Sobic004G100700 Sobic002G188900 Sobic002G188900 Sobic003G393900--Sobic002G188900 Sobic004G065500 Sobic004G065500 Sobic003G393900--Sobic004G065500 Sobic006G267200 Sobic006G267200 Sobic003G393900--Sobic006G267200 Sobic005G011300 Sobic005G011300 Sobic003G393900--Sobic005G011300 Sobic003G393900--Sobic003G369100 Sobic001G459800--Sobic001G391500 Sobic001G459800--Sobic006G267200 Sobic001G459800--Sobic004G141200 Sobic001G459800--Sobic003G393900 Sobic001G459800--Sobic003G228900 Sobic001G459800--Sobic004G065500 Sobic001G459800--Sobic001G138600 Sobic001G459800--Sobic007G074000 Sobic001G459800--Sobic005G011300 Sobic004G304625--Sobic004G141200 Sobic004G304625--Sobic001G108200 Sobic004G304625--Sobic002G188900 Sobic004G304625--Sobic003G369100 Sobic004G304625--Sobic001G140900 Sobic007G036900 Sobic007G036900 Sobic004G304625--Sobic007G036900 Sobic004G304625--Sobic003G393900 Sobic003G033900 Sobic003G033900 Sobic004G304625--Sobic003G033900 Sobic007G057000 Sobic007G057000 Sobic004G304625--Sobic007G057000 Sobic001G138600--Sobic003G382800 Sobic001G138600--Sobic001G112200 Sobic001G138600--Sobic004G141200 Sobic001G138600--Sobic003G369100 Sobic009G184000 Sobic009G184000 Sobic001G138600--Sobic009G184000 Sobic001G079300 Sobic001G079300 Sobic001G138600--Sobic001G079300 Sobic001G138600--Sobic007G074000 Sobic001G138600--Sobic001G459800 Sobic001G138600--Sobic001G391500 Sobic001G391500--Sobic001G459800 Sobic001G391500--Sobic004G141200 Sobic003G144700 Sobic003G144700 Sobic001G391500--Sobic003G144700 Sobic007G213800 Sobic007G213800 Sobic001G391500--Sobic007G213800 Sobic001G320900 Sobic001G320900 Sobic001G391500--Sobic001G320900 Sobic003G148600 Sobic003G148600 Sobic001G391500--Sobic003G148600 Sobic001G391500--Sobic003G369100 Sobic001G391500--Sobic001G138600 Sobic001G391500--Sobic007G074000 Sobic004G100700--Sobic005G011300 Sobic004G100700--Sobic002G188900 Sobic004G100700--Sobic001G140900 Sobic004G100700--Sobic001G108200 Sobic001G169500 Sobic001G169500 Sobic004G100700--Sobic001G169500 Sobic004G100700--Sobic004G141200 Sobic004G100700--Sobic003G393900 Sobic004G301000 Sobic004G301000 Sobic004G100700--Sobic004G301000 Sobic001G367600 Sobic001G367600 Sobic004G100700--Sobic001G367600
Octagon: transcription factors


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