Gene annotation
Transcriptome id Sobic.004G304625.1
Synonym -
Functional annotation -
UniProt A0A194YSL8
Pfam PF13561
Panther DB PTHR24322 PTHR24322:SF529
NCBI CDD KOG1208; Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases)
KEGG Orthology K15095; (+)-neomenthol dehydrogenase
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT3G61220 : NAD(P)-binding Rossmann-fold superfamily protein
RAP-DB (Rice) LOC_Os02g42790.1 : short-chain dehydrogenase/reductase, putative, expressed
MaizeGDB (Corn) Zm00025a015469
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
2 Sobic.001G108200 expressed protein -
3 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
4 Sobic.003G369100 AP2 domain containing protein, expressed -
5 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
6 Sobic.007G036900 triacylglycerol lipase like protein, putative, expressed -
7 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
8 Sobic.003G033900 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed K01762: 1-aminocyclopropane-1-carboxylate synthase
9 Sobic.007G057000 expressed protein -
10 Sobic.001G405500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@pyruvate decarboxylase isozyme 2, putative, expressed K01568: PDC, pyruvate decarboxylase
11 Sobic.003G086600 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
12 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
13 Sobic.001G308300 expressed protein -
14 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
15 Sobic.003G382800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
16 Sobic.001G391500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
17 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
18 Sobic.003G364600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
19 Sobic.003G355100 expressed protein -
20 Sobic.003G367200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78


Gene co-expression network
sample Sobic004G304625 Sobic004G304625 Sobic004G141200 Sobic004G141200 Sobic004G304625--Sobic004G141200 Sobic001G108200 Sobic001G108200 Sobic004G304625--Sobic001G108200 Sobic002G188900 Sobic002G188900 Sobic004G304625--Sobic002G188900 Sobic003G369100 Sobic003G369100 Sobic004G304625--Sobic003G369100 Sobic001G140900 Sobic001G140900 Sobic004G304625--Sobic001G140900 Sobic007G036900 Sobic007G036900 Sobic004G304625--Sobic007G036900 Sobic003G393900 Sobic003G393900 Sobic004G304625--Sobic003G393900 Sobic003G033900 Sobic003G033900 Sobic004G304625--Sobic003G033900 Sobic007G057000 Sobic007G057000 Sobic004G304625--Sobic007G057000 Sobic004G141200--Sobic003G369100 Sobic004G141200--Sobic001G108200 Sobic007G074000 Sobic007G074000 Sobic004G141200--Sobic007G074000 Sobic004G141200--Sobic003G393900 Sobic001G459800 Sobic001G459800 Sobic004G141200--Sobic001G459800 Sobic004G141200--Sobic004G304625 Sobic001G138600 Sobic001G138600 Sobic004G141200--Sobic001G138600 Sobic001G391500 Sobic001G391500 Sobic004G141200--Sobic001G391500 Sobic004G100700 Sobic004G100700 Sobic004G141200--Sobic004G100700 Sobic001G108200--Sobic004G141200 Sobic001G108200--Sobic003G393900 Sobic001G108200--Sobic004G100700 Sobic001G108200--Sobic003G369100 Sobic003G086600 Sobic003G086600 Sobic001G108200--Sobic003G086600 Sobic003G355100 Sobic003G355100 Sobic001G108200--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic001G108200--Sobic007G214600 Sobic003G382800 Sobic003G382800 Sobic001G108200--Sobic003G382800 Sobic005G099000 Sobic005G099000 Sobic001G108200--Sobic005G099000 Sobic002G188900--Sobic004G100700 Sobic005G011300 Sobic005G011300 Sobic002G188900--Sobic005G011300 Sobic002G188900--Sobic003G033900 Sobic002G188900--Sobic001G140900 Sobic002G188900--Sobic004G141200 Sobic002G188900--Sobic003G393900 Sobic002G188900--Sobic001G108200 Sobic002G188900--Sobic004G304625 Sobic002G188900--Sobic007G057000 Sobic003G369100--Sobic004G141200 Sobic003G369100--Sobic007G074000 Sobic003G369100--Sobic001G138600 Sobic003G369100--Sobic001G108200 Sobic003G369100--Sobic001G140900 Sobic001G112200 Sobic001G112200 Sobic003G369100--Sobic001G112200 Sobic003G345100 Sobic003G345100 Sobic003G369100--Sobic003G345100 Sobic008G050600 Sobic008G050600 Sobic003G369100--Sobic008G050600 Sobic001G308300 Sobic001G308300 Sobic003G369100--Sobic001G308300 Sobic001G140900--Sobic008G050600 Sobic001G140900--Sobic003G345100 Sobic001G038900 Sobic001G038900 Sobic001G140900--Sobic001G038900 Sobic005G063100 Sobic005G063100 Sobic001G140900--Sobic005G063100 Sobic001G140900--Sobic004G100700 Sobic001G140900--Sobic003G369100 Sobic001G367600 Sobic001G367600 Sobic001G140900--Sobic001G367600 Sobic008G136400 Sobic008G136400 Sobic001G140900--Sobic008G136400 Sobic001G140900--Sobic004G141200 Sobic004G004500 Sobic004G004500 Sobic007G036900--Sobic004G004500 Sobic008G187001 Sobic008G187001 Sobic007G036900--Sobic008G187001 Sobic004G229800 Sobic004G229800 Sobic007G036900--Sobic004G229800 Sobic001G256700 Sobic001G256700 Sobic007G036900--Sobic001G256700 Sobic007G036900--Sobic004G141200 Sobic002G339000 Sobic002G339000 Sobic007G036900--Sobic002G339000 Sobic003G364600 Sobic003G364600 Sobic007G036900--Sobic003G364600 Sobic007G036900--Sobic001G108200 Sobic001G079300 Sobic001G079300 Sobic007G036900--Sobic001G079300 Sobic003G393900--Sobic004G141200 Sobic003G393900--Sobic001G108200 Sobic003G393900--Sobic001G459800 Sobic003G393900--Sobic004G100700 Sobic003G393900--Sobic002G188900 Sobic004G065500 Sobic004G065500 Sobic003G393900--Sobic004G065500 Sobic006G267200 Sobic006G267200 Sobic003G393900--Sobic006G267200 Sobic003G393900--Sobic005G011300 Sobic003G393900--Sobic003G369100 Sobic003G033900--Sobic002G188900 Sobic003G033900--Sobic001G108200 Sobic003G033900--Sobic004G100700 Sobic003G033900--Sobic003G393900 Sobic001G476500 Sobic001G476500 Sobic003G033900--Sobic001G476500 Sobic003G033900--Sobic004G304625 Sobic003G033900--Sobic005G011300 Sobic003G033900--Sobic004G141200 Sobic003G033900--Sobic004G229800 Sobic010G066700 Sobic010G066700 Sobic007G057000--Sobic010G066700 Sobic007G057000--Sobic002G188900 Sobic009G183400 Sobic009G183400 Sobic007G057000--Sobic009G183400 Sobic007G057000--Sobic004G304625 Sobic001G119400 Sobic001G119400 Sobic007G057000--Sobic001G119400 Sobic007G155100 Sobic007G155100 Sobic007G057000--Sobic007G155100 Sobic001G423800 Sobic001G423800 Sobic007G057000--Sobic001G423800 Sobic007G057000--Sobic003G033900 Sobic007G057000--Sobic004G100700
Octagon: transcription factors


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