Gene annotation
| Transcriptome id | Sobic.004G100700.1 |
|---|---|
| Synonym | |
| Functional annotation | ethylene-responsive transcription factor TINY, putative, expressed |
| UniProt | A0A194YNR1 |
| Pfam | PF00847 |
| Panther DB | PTHR31985 PTHR31985:SF35 |
| NCBI CDD | - |
| KEGG Orthology | K09286; EREBP-like factor |
| Gene Ontology | GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity |
Orthologs (automatic annotation)
| TAIR | AT5G11590 : Integrase-type DNA-binding superfamily protein |
|---|---|
| RAP-DB (Rice) | LOC_Os02g13710.1 : ethylene-responsive transcription factor TINY, putative, expressed |
| MaizeGDB (Corn) | Zm00025a020096 , Zm00025a020098 , Zm00025a020883 , Zm00025a020881 , Zm00025a003312 , Zm00025a051964 |
| Brachypodium | KQK00604 , KQJ94139 |
| Barley | HORVU1Hr1G056090.1 , HORVU0Hr1G018290.1 , HORVU0Hr1G016370.1 , HORVU3Hr1G026950.1 , HORVU0Hr1G018280.1 , HORVU0Hr1G030500.1 , HORVU0Hr1G018240.1 , HORVU6Hr1G062940.1 , HORVU7Hr1G088790.1 , HORVU3Hr1G086870.2 , HORVU3Hr1G086870.1 |
| Wheat | - |
| Populus | - |
JBrowse
Expression pattern by RNA-Seq analysis
 |
Find similar expressed genes
 |
| Rank | Gene | Function | KEGG orthology |
|---|---|---|---|
| 1 | Sobic.005G011300 | peroxidase precursor, putative, expressed | K00430: peroxidase |
| 2 | Sobic.002G188900 | cytokinin-O-glucosyltransferase 1, putative, expressed | - |
| 3 | Sobic.001G140900 | helix-loop-helix DNA-binding protein, putative, expressed | - |
| 4 | Sobic.001G108200 | expressed protein | - |
| 5 | Sobic.001G169500 | - | - |
| 6 | Sobic.004G141200 | cytochrome P450, putative, expressed | K00487: trans-cinnamate 4-monooxygenase |
| 7 | Sobic.003G393900 | Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed | K01623: fructose-bisphosphate aldolase, class I |
| 8 | Sobic.004G301000 | B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed | - |
| 9 | Sobic.001G367600 | SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein | - |
| 10 | Sobic.005G099000 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed | - |
| 11 | Sobic.001G423800 | DNA binding protein, putative, expressed | - |
| 12 | Sobic.001G038900 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed | - |
| 13 | Sobic.001G435000 | gibberellin receptor GID1L2, putative, expressed | - |
| 14 | Sobic.003G033900 | SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@aminotransferase, classes I and II, domain containing protein, expressed | K01762: 1-aminocyclopropane-1-carboxylate synthase |
| 15 | Sobic.003G382800 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein | - |
| 16 | Sobic.003G369100 | AP2 domain containing protein, expressed | - |
| 17 | Sobic.009G183400 | SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed | - |
| 18 | Sobic.005G063100 | expressed protein | - |
| 19 | Sobic.006G092500 | expressed protein | - |
| 20 | Sobic.008G050600 | "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed | - |
Gene co-expression network
Octagon: transcription factors
© 2015- RIKEN, All rights reserved.
