Gene annotation
Transcriptome id Sobic.004G301000.1
Synonym B-box (BBX) protein, STH2, SbBBX10, Sb04g033440
Functional annotation B-box (BBX) protein (PubMedID : 30626335)
B-box zinc finger family protein, putative, expressed
UniProt C5XS40
Pfam PF00643
Panther DB PTHR31832 PTHR31832:SF12
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0008270; zinc ion binding GO:0005622intracellular


Orthologs (automatic annotation)
TAIR AT1G75540 : salt tolerance homolog2
RAP-DB (Rice) LOC_Os02g43170.1 : B-box zinc finger family protein, putative, expressed
MaizeGDB (Corn) Zm00025a020944 , Zm00025a032155 , Zm00025a056617 , Zm00025a010390 , Zm00025a021250
Brachypodium KQK17523 , KQK00540 , KQJ83834 , KQJ83833
Barley HORVU2Hr1G092460.9 , HORVU2Hr1G092460.8 , HORVU2Hr1G092460.4 , HORVU2Hr1G092460.3 , HORVU2Hr1G092460.5 , HORVU2Hr1G092460.20 , HORVU2Hr1G092460.7 , HORVU2Hr1G092460.6 , HORVU2Hr1G092460.1 , HORVU2Hr1G092460.2 , HORVU7Hr1G091180.2 , HORVU7Hr1G091180.3 , HORVU7Hr1G091180.1 , HORVU7Hr1G091180.6 , HORVU7Hr1G091180.4 , HORVU7Hr1G091180.5 , HORVU2Hr1G092460.19 , HORVU2Hr1G092460.18 , HORVU2Hr1G092460.11 , HORVU2Hr1G092460.10 , HORVU2Hr1G092460.13 , HORVU2Hr1G092460.12 , HORVU2Hr1G092460.15 , HORVU2Hr1G092460.14 , HORVU2Hr1G092460.17 , HORVU2Hr1G092460.16
Wheat TraesCS2A02G388500 , TraesCS2A02G388500 , TraesCS2A02G388500 , TraesCS7A02G383400 , TraesCS7A02G383400 , TraesCS7A02G383400 , TraesCS6A02G239300 , TraesCS2D02G386300 , TraesCS7B02G286300 , TraesCS7B02G286300 , TraesCS7D02G379900 , TraesCS7D02G379900 , TraesCS7B02G286300 , TraesCS2D02G386300 , TraesCS6D02G221700 , TraesCS6B02G285200 , TraesCS2B02G406600 , TraesCS2B02G406600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
2 Sobic.001G108200 expressed protein -
3 Sobic.001G481100 DUF581 domain containing protein, expressed -
4 Sobic.001G423800 DNA binding protein, putative, expressed -
5 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
6 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
7 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
8 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -
9 Sobic.002G251000 expressed protein -
10 Sobic.003G116800 cinnamoyl CoA reductase, putative, expressed K09753: cinnamoyl-CoA reductase
11 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
12 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
13 Sobic.003G357300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.003G364600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glycosyl hydrolases family 17, putative, expressed -
15 Sobic.009G224100 UDP-glucoronosyl and UDP-glucosyl transferase domain containing protein, expressed -
16 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
17 Sobic.003G393900 Fructose-bisphosphate aldolase(PubMedID : 26186930)@fructose-bisphospate aldolase isozyme, putative, expressed K01623: fructose-bisphosphate aldolase, class I
18 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
19 Sobic.010G176600 - -
20 Sobic.005G063100 expressed protein -


Gene co-expression network
sample Sobic004G301000 Sobic004G301000 Sobic004G100700 Sobic004G100700 Sobic004G301000--Sobic004G100700 Sobic001G108200 Sobic001G108200 Sobic004G301000--Sobic001G108200 Sobic001G481100 Sobic001G481100 Sobic004G301000--Sobic001G481100 Sobic001G423800 Sobic001G423800 Sobic004G301000--Sobic001G423800 Sobic002G188900 Sobic002G188900 Sobic004G301000--Sobic002G188900 Sobic004G141200 Sobic004G141200 Sobic004G301000--Sobic004G141200 Sobic005G011300 Sobic005G011300 Sobic004G301000--Sobic005G011300 Sobic005G099000 Sobic005G099000 Sobic004G301000--Sobic005G099000 Sobic002G251000 Sobic002G251000 Sobic004G301000--Sobic002G251000 Sobic004G100700--Sobic005G011300 Sobic004G100700--Sobic002G188900 Sobic001G140900 Sobic001G140900 Sobic004G100700--Sobic001G140900 Sobic004G100700--Sobic001G108200 Sobic001G169500 Sobic001G169500 Sobic004G100700--Sobic001G169500 Sobic004G100700--Sobic004G141200 Sobic003G393900 Sobic003G393900 Sobic004G100700--Sobic003G393900 Sobic004G100700--Sobic004G301000 Sobic001G367600 Sobic001G367600 Sobic004G100700--Sobic001G367600 Sobic001G108200--Sobic004G141200 Sobic001G108200--Sobic003G393900 Sobic001G108200--Sobic004G100700 Sobic003G369100 Sobic003G369100 Sobic001G108200--Sobic003G369100 Sobic003G086600 Sobic003G086600 Sobic001G108200--Sobic003G086600 Sobic003G355100 Sobic003G355100 Sobic001G108200--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic001G108200--Sobic007G214600 Sobic003G382800 Sobic003G382800 Sobic001G108200--Sobic003G382800 Sobic001G108200--Sobic005G099000 Sobic003G228900 Sobic003G228900 Sobic001G481100--Sobic003G228900 Sobic006G075400 Sobic006G075400 Sobic001G481100--Sobic006G075400 Sobic001G318700 Sobic001G318700 Sobic001G481100--Sobic001G318700 Sobic007G074000 Sobic007G074000 Sobic001G481100--Sobic007G074000 Sobic001G256700 Sobic001G256700 Sobic001G481100--Sobic001G256700 Sobic003G202200 Sobic003G202200 Sobic001G481100--Sobic003G202200 Sobic001G079300 Sobic001G079300 Sobic001G481100--Sobic001G079300 Sobic001G481100--Sobic004G301000 Sobic001G481100--Sobic002G251000 Sobic004G243100 Sobic004G243100 Sobic001G423800--Sobic004G243100 Sobic002G140400 Sobic002G140400 Sobic001G423800--Sobic002G140400 Sobic001G038900 Sobic001G038900 Sobic001G423800--Sobic001G038900 Sobic001G119400 Sobic001G119400 Sobic001G423800--Sobic001G119400 Sobic001G018300 Sobic001G018300 Sobic001G423800--Sobic001G018300 Sobic007G155100 Sobic007G155100 Sobic001G423800--Sobic007G155100 Sobic008G136400 Sobic008G136400 Sobic001G423800--Sobic008G136400 Sobic002G393000 Sobic002G393000 Sobic001G423800--Sobic002G393000 Sobic004G189400 Sobic004G189400 Sobic001G423800--Sobic004G189400 Sobic002G188900--Sobic004G100700 Sobic002G188900--Sobic005G011300 Sobic003G033900 Sobic003G033900 Sobic002G188900--Sobic003G033900 Sobic002G188900--Sobic001G140900 Sobic002G188900--Sobic004G141200 Sobic002G188900--Sobic003G393900 Sobic002G188900--Sobic001G108200 Sobic004G304625 Sobic004G304625 Sobic002G188900--Sobic004G304625 Sobic007G057000 Sobic007G057000 Sobic002G188900--Sobic007G057000 Sobic004G141200--Sobic003G369100 Sobic004G141200--Sobic001G108200 Sobic004G141200--Sobic007G074000 Sobic004G141200--Sobic003G393900 Sobic001G459800 Sobic001G459800 Sobic004G141200--Sobic001G459800 Sobic004G141200--Sobic004G304625 Sobic001G138600 Sobic001G138600 Sobic004G141200--Sobic001G138600 Sobic001G391500 Sobic001G391500 Sobic004G141200--Sobic001G391500 Sobic004G141200--Sobic004G100700 Sobic005G011300--Sobic004G100700 Sobic005G011300--Sobic001G169500 Sobic005G011300--Sobic002G188900 Sobic005G107900 Sobic005G107900 Sobic005G011300--Sobic005G107900 Sobic003G432700 Sobic003G432700 Sobic005G011300--Sobic003G432700 Sobic005G011300--Sobic004G141200 Sobic005G011300--Sobic001G140900 Sobic003G084400 Sobic003G084400 Sobic005G011300--Sobic003G084400 Sobic004G171400 Sobic004G171400 Sobic005G011300--Sobic004G171400 Sobic005G063100 Sobic005G063100 Sobic005G099000--Sobic005G063100 Sobic003G345100 Sobic003G345100 Sobic005G099000--Sobic003G345100 Sobic003G116800 Sobic003G116800 Sobic005G099000--Sobic003G116800 Sobic005G099000--Sobic004G141200 Sobic005G099000--Sobic001G169500 Sobic001G435000 Sobic001G435000 Sobic005G099000--Sobic001G435000 Sobic004G208700 Sobic004G208700 Sobic005G099000--Sobic004G208700 Sobic005G099000--Sobic005G011300 Sobic005G099000--Sobic001G108200 Sobic002G251000--Sobic004G243100 Sobic002G251000--Sobic001G318700 Sobic002G251000--Sobic001G423800 Sobic001G231400 Sobic001G231400 Sobic002G251000--Sobic001G231400 Sobic002G251000--Sobic001G018300 Sobic001G192200 Sobic001G192200 Sobic002G251000--Sobic001G192200 Sobic003G282901 Sobic003G282901 Sobic002G251000--Sobic003G282901 Sobic002G251000--Sobic002G140400 Sobic002G251000--Sobic004G189400
Octagon: transcription factors


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