Gene annotation
Transcriptome id Sobic.001G481100.1
Synonym Sb01g045030
Functional annotation DUF581 domain containing protein, expressed
UniProt C5WVR3
Pfam PF04570
Panther DB PTHR33059 PTHR33059:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G20700 : Protein of unknown function (DUF581)
RAP-DB (Rice) LOC_Os03g08520.1 : DUF581 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a000953
Brachypodium KQK23283
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
2 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
3 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
4 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
5 Sobic.001G256700 cystathionine gamma-synthase, putative, expressed K01739: cystathionine gamma-synthase
6 Sobic.003G202200 uncharacterized protein PA4923, putative, expressed K06966: pyrimidine/purine-5'-nucleotide nucleosidase
7 Sobic.001G079300 helix-loop-helix DNA-binding domain containing protein, expressed -
8 Sobic.004G301000 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -
9 Sobic.002G251000 expressed protein -
10 Sobic.004G294400 expansin precursor, putative, expressed -
11 Sobic.002G395300 gibberellin receptor GID1L2, putative, expressed -
12 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
15 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
16 Sobic.001G330400 ZOS3-11 - C2H2 zinc finger protein, expressed -
17 Sobic.005G186100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@patatin, putative, expressed -
18 Sobic.009G151600 AP2 domain containing protein, expressed -
19 Sobic.009G122400 expressed protein -
20 Sobic.007G017500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G481100 Sobic001G481100 Sobic003G228900 Sobic003G228900 Sobic001G481100--Sobic003G228900 Sobic006G075400 Sobic006G075400 Sobic001G481100--Sobic006G075400 Sobic001G318700 Sobic001G318700 Sobic001G481100--Sobic001G318700 Sobic007G074000 Sobic007G074000 Sobic001G481100--Sobic007G074000 Sobic001G256700 Sobic001G256700 Sobic001G481100--Sobic001G256700 Sobic003G202200 Sobic003G202200 Sobic001G481100--Sobic003G202200 Sobic001G079300 Sobic001G079300 Sobic001G481100--Sobic001G079300 Sobic004G301000 Sobic004G301000 Sobic001G481100--Sobic004G301000 Sobic002G251000 Sobic002G251000 Sobic001G481100--Sobic002G251000 Sobic003G228900--Sobic006G075400 Sobic010G209200 Sobic010G209200 Sobic003G228900--Sobic010G209200 Sobic009G184000 Sobic009G184000 Sobic003G228900--Sobic009G184000 Sobic004G191400 Sobic004G191400 Sobic003G228900--Sobic004G191400 Sobic003G432700 Sobic003G432700 Sobic003G228900--Sobic003G432700 Sobic003G260300 Sobic003G260300 Sobic003G228900--Sobic003G260300 Sobic007G017500 Sobic007G017500 Sobic003G228900--Sobic007G017500 Sobic009G122400 Sobic009G122400 Sobic003G228900--Sobic009G122400 Sobic003G228900--Sobic001G079300 Sobic006G075400--Sobic007G017500 Sobic004G294400 Sobic004G294400 Sobic006G075400--Sobic004G294400 Sobic006G075400--Sobic003G228900 Sobic003G043600 Sobic003G043600 Sobic006G075400--Sobic003G043600 Sobic003G268600 Sobic003G268600 Sobic006G075400--Sobic003G268600 Sobic001G330400 Sobic001G330400 Sobic006G075400--Sobic001G330400 Sobic006G075400--Sobic003G432700 Sobic005G107900 Sobic005G107900 Sobic006G075400--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic006G075400--Sobic001G502400 Sobic001G112200 Sobic001G112200 Sobic001G318700--Sobic001G112200 Sobic001G018300 Sobic001G018300 Sobic001G318700--Sobic001G018300 Sobic004G243100 Sobic004G243100 Sobic001G318700--Sobic004G243100 Sobic002G192000 Sobic002G192000 Sobic001G318700--Sobic002G192000 Sobic003G303100 Sobic003G303100 Sobic001G318700--Sobic003G303100 Sobic001G318700--Sobic002G251000 Sobic001G140900 Sobic001G140900 Sobic001G318700--Sobic001G140900 Sobic001G318700--Sobic006G075400 Sobic001G318700--Sobic001G481100 Sobic003G369100 Sobic003G369100 Sobic007G074000--Sobic003G369100 Sobic004G141200 Sobic004G141200 Sobic007G074000--Sobic004G141200 Sobic004G237800 Sobic004G237800 Sobic007G074000--Sobic004G237800 Sobic002G140400 Sobic002G140400 Sobic007G074000--Sobic002G140400 Sobic007G074000--Sobic003G228900 Sobic002G336600 Sobic002G336600 Sobic007G074000--Sobic002G336600 Sobic003G364600 Sobic003G364600 Sobic007G074000--Sobic003G364600 Sobic001G138600 Sobic001G138600 Sobic007G074000--Sobic001G138600 Sobic009G247900 Sobic009G247900 Sobic007G074000--Sobic009G247900 Sobic008G187001 Sobic008G187001 Sobic001G256700--Sobic008G187001 Sobic004G004500 Sobic004G004500 Sobic001G256700--Sobic004G004500 Sobic002G388900 Sobic002G388900 Sobic001G256700--Sobic002G388900 Sobic001G256700--Sobic004G294400 Sobic004G219800 Sobic004G219800 Sobic001G256700--Sobic004G219800 Sobic002G395300 Sobic002G395300 Sobic001G256700--Sobic002G395300 Sobic002G339000 Sobic002G339000 Sobic001G256700--Sobic002G339000 Sobic001G330100 Sobic001G330100 Sobic001G256700--Sobic001G330100 Sobic001G195200 Sobic001G195200 Sobic001G256700--Sobic001G195200 Sobic003G202200--Sobic001G481100 Sobic003G202200--Sobic009G247900 Sobic001G383700 Sobic001G383700 Sobic003G202200--Sobic001G383700 Sobic001G449700 Sobic001G449700 Sobic003G202200--Sobic001G449700 Sobic003G021500 Sobic003G021500 Sobic003G202200--Sobic003G021500 Sobic003G202200--Sobic003G228900 Sobic003G202200--Sobic004G191400 Sobic003G202200--Sobic003G364600 Sobic009G036000 Sobic009G036000 Sobic003G202200--Sobic009G036000 Sobic001G079300--Sobic004G191400 Sobic004G191300 Sobic004G191300 Sobic001G079300--Sobic004G191300 Sobic001G079300--Sobic010G209200 Sobic001G079300--Sobic003G228900 Sobic001G079300--Sobic001G138600 Sobic001G079300--Sobic009G122400 Sobic001G079300--Sobic003G260300 Sobic001G079300--Sobic004G141200 Sobic001G079300--Sobic009G184000 Sobic004G100700 Sobic004G100700 Sobic004G301000--Sobic004G100700 Sobic001G108200 Sobic001G108200 Sobic004G301000--Sobic001G108200 Sobic004G301000--Sobic001G481100 Sobic001G423800 Sobic001G423800 Sobic004G301000--Sobic001G423800 Sobic002G188900 Sobic002G188900 Sobic004G301000--Sobic002G188900 Sobic004G301000--Sobic004G141200 Sobic005G011300 Sobic005G011300 Sobic004G301000--Sobic005G011300 Sobic005G099000 Sobic005G099000 Sobic004G301000--Sobic005G099000 Sobic004G301000--Sobic002G251000 Sobic002G251000--Sobic004G243100 Sobic002G251000--Sobic001G318700 Sobic002G251000--Sobic001G423800 Sobic001G231400 Sobic001G231400 Sobic002G251000--Sobic001G231400 Sobic002G251000--Sobic001G018300 Sobic001G192200 Sobic001G192200 Sobic002G251000--Sobic001G192200 Sobic003G282901 Sobic003G282901 Sobic002G251000--Sobic003G282901 Sobic002G251000--Sobic002G140400 Sobic004G189400 Sobic004G189400 Sobic002G251000--Sobic004G189400
Octagon: transcription factors


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