Gene annotation
Transcriptome id Sobic.005G186100.1
Synonym PLA2A, PLAIIA, PLP2, Sb05g024380
Functional annotation SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence. (PubMedID : 27586543)
patatin, putative, expressed
UniProt Q9XE75
Pfam PF01734
Panther DB PTHR32176 PTHR32176:SF10
NCBI CDD KOG0513; Ca2+-independent phospholipase A2
KEGG Orthology -
Gene Ontology GO:0006629; lipid metabolic process


Orthologs (automatic annotation)
TAIR AT2G26560 : phospholipase A 2A
RAP-DB (Rice) LOC_Os11g39990.1 : patatin, putative, expressed
MaizeGDB (Corn) Zm00025a015878 , Zm00025a029371 , Zm00025a015884
Brachypodium KQJ98659 , KQJ98604 , KQJ87807 , KQJ87809 , KQK11881
Barley HORVU1Hr1G012140.11 , HORVU1Hr1G012140.10 , HORVU1Hr1G012140.12 , HORVU1Hr1G069200.1 , HORVU1Hr1G069200.2 , HORVU1Hr1G069200.3 , HORVU1Hr1G012140.7 , HORVU7Hr1G036460.6 , HORVU7Hr1G036460.7 , HORVU7Hr1G036460.4 , HORVU7Hr1G036460.5 , HORVU7Hr1G036460.2 , HORVU7Hr1G036460.3 , HORVU7Hr1G036460.1 , HORVU7Hr1G036460.8 , HORVU7Hr1G036460.9 , HORVU4Hr1G075070.9 , HORVU4Hr1G075070.8 , HORVU4Hr1G075070.3 , HORVU4Hr1G075070.2 , HORVU4Hr1G075070.7 , HORVU4Hr1G075070.6 , HORVU4Hr1G075070.5 , HORVU4Hr1G075070.4 , HORVU1Hr1G012140.9 , HORVU1Hr1G012140.8 , HORVU1Hr1G012140.5 , HORVU1Hr1G012140.4 , HORVU1Hr1G012140.6 , HORVU1Hr1G012140.1 , HORVU1Hr1G012140.3 , HORVU1Hr1G012140.2 , HORVU3Hr1G004220.4 , HORVU3Hr1G004220.6 , HORVU3Hr1G004220.1 , HORVU3Hr1G004220.3 , HORVU3Hr1G004220.2
Wheat TraesCS1B02G077500 , TraesCS7B02G082400 , TraesCS1D02G302900 , TraesCS1A02G059100 , TraesCS7D02G178600 , TraesCS4B02G286600 , TraesCS7A02G177300 , TraesCS1D02G060500 , TraesCS3D02G033500 , TraesCS1B02G313800 , TraesCS3D02G033200 , TraesCS1A02G303400 , TraesCS4A02G017400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G138600 VQ domain containing protein, putative, expressed -
2 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
3 Sobic.006G056400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@zinc-finger protein, putative, expressed K13464: jasmonate ZIM domain-containing protein
4 Sobic.002G333400 KI domain interacting kinase 1, putative, expressed -
5 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
7 Sobic.001G481100 DUF581 domain containing protein, expressed -
8 Sobic.001G079300 helix-loop-helix DNA-binding domain containing protein, expressed -
9 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
10 Sobic.010G209200 WRKY28, expressed -
11 Sobic.003G369100 AP2 domain containing protein, expressed -
12 Sobic.004G191400 - -
13 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
14 Sobic.001G407800 leucoanthocyanidin dioxygenase, putative, expressed -
15 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
16 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
17 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
18 Sobic.007G169700 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed K01240: uridine nucleosidase
19 Sobic.001G310600 expressed protein -
20 Sobic.009G141500 Not investigated(PubMedID : 23766026)@"SERF1(Ortholog in rice:Schmidt et al., 2013)"(PubMedID : 31659925)@ethylene-responsive transcription factor ERF020, putative, expressed -


Gene co-expression network
sample Sobic005G186100 Sobic005G186100 Sobic001G138600 Sobic001G138600 Sobic005G186100--Sobic001G138600 Sobic001G112200 Sobic001G112200 Sobic005G186100--Sobic001G112200 Sobic006G056400 Sobic006G056400 Sobic005G186100--Sobic006G056400 Sobic002G333400 Sobic002G333400 Sobic005G186100--Sobic002G333400 Sobic001G318700 Sobic001G318700 Sobic005G186100--Sobic001G318700 Sobic003G228900 Sobic003G228900 Sobic005G186100--Sobic003G228900 Sobic001G481100 Sobic001G481100 Sobic005G186100--Sobic001G481100 Sobic001G079300 Sobic001G079300 Sobic005G186100--Sobic001G079300 Sobic009G184000 Sobic009G184000 Sobic005G186100--Sobic009G184000 Sobic003G382800 Sobic003G382800 Sobic001G138600--Sobic003G382800 Sobic001G138600--Sobic001G112200 Sobic004G141200 Sobic004G141200 Sobic001G138600--Sobic004G141200 Sobic003G369100 Sobic003G369100 Sobic001G138600--Sobic003G369100 Sobic001G138600--Sobic009G184000 Sobic001G138600--Sobic001G079300 Sobic007G074000 Sobic007G074000 Sobic001G138600--Sobic007G074000 Sobic001G459800 Sobic001G459800 Sobic001G138600--Sobic001G459800 Sobic001G391500 Sobic001G391500 Sobic001G138600--Sobic001G391500 Sobic001G112200--Sobic009G184000 Sobic001G112200--Sobic001G318700 Sobic001G112200--Sobic001G138600 Sobic001G112200--Sobic003G369100 Sobic007G169700 Sobic007G169700 Sobic001G112200--Sobic007G169700 Sobic004G237800 Sobic004G237800 Sobic001G112200--Sobic004G237800 Sobic009G145700 Sobic009G145700 Sobic001G112200--Sobic009G145700 Sobic001G112200--Sobic007G074000 Sobic001G310600 Sobic001G310600 Sobic001G112200--Sobic001G310600 Sobic006G056400--Sobic002G333400 Sobic006G158600 Sobic006G158600 Sobic006G056400--Sobic006G158600 Sobic008G136400 Sobic008G136400 Sobic006G056400--Sobic008G136400 Sobic006G056400--Sobic003G369100 Sobic006G056400--Sobic005G186100 Sobic002G140400 Sobic002G140400 Sobic006G056400--Sobic002G140400 Sobic006G056400--Sobic007G074000 Sobic006G056400--Sobic001G318700 Sobic001G308300 Sobic001G308300 Sobic006G056400--Sobic001G308300 Sobic001G407800 Sobic001G407800 Sobic002G333400--Sobic001G407800 Sobic002G333400--Sobic006G158600 Sobic002G333400--Sobic006G056400 Sobic002G333400--Sobic008G136400 Sobic002G333400--Sobic005G186100 Sobic002G333400--Sobic003G369100 Sobic009G151600 Sobic009G151600 Sobic002G333400--Sobic009G151600 Sobic002G333400--Sobic002G140400 Sobic002G333400--Sobic007G074000 Sobic001G318700--Sobic001G112200 Sobic001G018300 Sobic001G018300 Sobic001G318700--Sobic001G018300 Sobic004G243100 Sobic004G243100 Sobic001G318700--Sobic004G243100 Sobic002G192000 Sobic002G192000 Sobic001G318700--Sobic002G192000 Sobic003G303100 Sobic003G303100 Sobic001G318700--Sobic003G303100 Sobic002G251000 Sobic002G251000 Sobic001G318700--Sobic002G251000 Sobic001G140900 Sobic001G140900 Sobic001G318700--Sobic001G140900 Sobic006G075400 Sobic006G075400 Sobic001G318700--Sobic006G075400 Sobic001G318700--Sobic001G481100 Sobic003G228900--Sobic006G075400 Sobic010G209200 Sobic010G209200 Sobic003G228900--Sobic010G209200 Sobic003G228900--Sobic009G184000 Sobic004G191400 Sobic004G191400 Sobic003G228900--Sobic004G191400 Sobic003G432700 Sobic003G432700 Sobic003G228900--Sobic003G432700 Sobic003G260300 Sobic003G260300 Sobic003G228900--Sobic003G260300 Sobic007G017500 Sobic007G017500 Sobic003G228900--Sobic007G017500 Sobic009G122400 Sobic009G122400 Sobic003G228900--Sobic009G122400 Sobic003G228900--Sobic001G079300 Sobic001G481100--Sobic003G228900 Sobic001G481100--Sobic006G075400 Sobic001G481100--Sobic001G318700 Sobic001G481100--Sobic007G074000 Sobic001G256700 Sobic001G256700 Sobic001G481100--Sobic001G256700 Sobic003G202200 Sobic003G202200 Sobic001G481100--Sobic003G202200 Sobic001G481100--Sobic001G079300 Sobic004G301000 Sobic004G301000 Sobic001G481100--Sobic004G301000 Sobic001G481100--Sobic002G251000 Sobic001G079300--Sobic004G191400 Sobic004G191300 Sobic004G191300 Sobic001G079300--Sobic004G191300 Sobic001G079300--Sobic010G209200 Sobic001G079300--Sobic003G228900 Sobic001G079300--Sobic001G138600 Sobic001G079300--Sobic009G122400 Sobic001G079300--Sobic003G260300 Sobic001G079300--Sobic004G141200 Sobic001G079300--Sobic009G184000 Sobic009G184000--Sobic001G112200 Sobic009G184000--Sobic007G169700 Sobic006G235100 Sobic006G235100 Sobic009G184000--Sobic006G235100 Sobic001G502400 Sobic001G502400 Sobic009G184000--Sobic001G502400 Sobic009G184000--Sobic003G228900 Sobic009G184000--Sobic003G432700 Sobic009G184000--Sobic001G138600 Sobic008G066401 Sobic008G066401 Sobic009G184000--Sobic008G066401 Sobic002G189100 Sobic002G189100 Sobic009G184000--Sobic002G189100
Octagon: transcription factors


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