Gene annotation
Transcriptome id Sobic.003G432700.1
Synonym Sb03g046410
Functional annotation SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence. (PubMedID : 27586543)
secreted glycoprotein, putative, expressed
UniProt C5XIK1
Pfam PF01453
Panther DB PTHR32444 PTHR32444:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G78830 : Curculin-like (mannose-binding) lectin family protein
RAP-DB (Rice) LOC_Os01g72810.1 : secreted glycoprotein, putative, expressed
MaizeGDB (Corn) Zm00025a039087
Brachypodium -
Barley HORVU3Hr1G110350.2 , HORVU3Hr1G110350.1 , HORVU3Hr1G110440.1
Wheat -
Populus -


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cDNA sequences
Sobic.003G432700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
2 Sobic.001G502400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed -
3 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
4 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.001G313600 heavy metal-associated domain containing protein, expressed -
6 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
7 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
8 Sobic.001G169500 - -
9 Sobic.007G169700 inosine-uridine preferring nucleoside hydrolase family protein, putative, expressed K01240: uridine nucleosidase
10 Sobic.006G235100 expressed protein -
11 Sobic.001G138600 VQ domain containing protein, putative, expressed -
12 Sobic.001G459800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucose 6-dehydrogenase, putative, expressed K00012: UGDH, UDPglucose 6-dehydrogenase
13 Sobic.003G260300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
14 Sobic.007G017500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
15 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -
16 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
17 Sobic.009G032700 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.004G294400 expansin precursor, putative, expressed -
19 Sobic.001G079300 helix-loop-helix DNA-binding domain containing protein, expressed -
20 Sobic.004G141100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase


Gene co-expression network
sample Sobic003G432700 Sobic003G432700 Sobic005G107900 Sobic005G107900 Sobic003G432700--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic003G432700--Sobic001G502400 Sobic003G228900 Sobic003G228900 Sobic003G432700--Sobic003G228900 Sobic005G011300 Sobic005G011300 Sobic003G432700--Sobic005G011300 Sobic001G313600 Sobic001G313600 Sobic003G432700--Sobic001G313600 Sobic009G184000 Sobic009G184000 Sobic003G432700--Sobic009G184000 Sobic006G075400 Sobic006G075400 Sobic003G432700--Sobic006G075400 Sobic001G169500 Sobic001G169500 Sobic003G432700--Sobic001G169500 Sobic007G169700 Sobic007G169700 Sobic003G432700--Sobic007G169700 Sobic005G107900--Sobic001G502400 Sobic005G107900--Sobic001G313600 Sobic005G107900--Sobic003G432700 Sobic005G107900--Sobic005G011300 Sobic006G235100 Sobic006G235100 Sobic005G107900--Sobic006G235100 Sobic005G107900--Sobic006G075400 Sobic005G107900--Sobic009G184000 Sobic009G188000 Sobic009G188000 Sobic005G107900--Sobic009G188000 Sobic005G107900--Sobic001G169500 Sobic001G502400--Sobic005G107900 Sobic001G502400--Sobic001G313600 Sobic001G502400--Sobic006G235100 Sobic001G502400--Sobic003G432700 Sobic001G502400--Sobic009G184000 Sobic001G502400--Sobic006G075400 Sobic001G502400--Sobic009G188000 Sobic001G502400--Sobic005G011300 Sobic006G007900 Sobic006G007900 Sobic001G502400--Sobic006G007900 Sobic003G228900--Sobic006G075400 Sobic010G209200 Sobic010G209200 Sobic003G228900--Sobic010G209200 Sobic003G228900--Sobic009G184000 Sobic004G191400 Sobic004G191400 Sobic003G228900--Sobic004G191400 Sobic003G228900--Sobic003G432700 Sobic003G260300 Sobic003G260300 Sobic003G228900--Sobic003G260300 Sobic007G017500 Sobic007G017500 Sobic003G228900--Sobic007G017500 Sobic009G122400 Sobic009G122400 Sobic003G228900--Sobic009G122400 Sobic001G079300 Sobic001G079300 Sobic003G228900--Sobic001G079300 Sobic004G100700 Sobic004G100700 Sobic005G011300--Sobic004G100700 Sobic005G011300--Sobic001G169500 Sobic002G188900 Sobic002G188900 Sobic005G011300--Sobic002G188900 Sobic005G011300--Sobic005G107900 Sobic005G011300--Sobic003G432700 Sobic004G141200 Sobic004G141200 Sobic005G011300--Sobic004G141200 Sobic001G140900 Sobic001G140900 Sobic005G011300--Sobic001G140900 Sobic003G084400 Sobic003G084400 Sobic005G011300--Sobic003G084400 Sobic004G171400 Sobic004G171400 Sobic005G011300--Sobic004G171400 Sobic001G313600--Sobic005G107900 Sobic001G313600--Sobic001G502400 Sobic001G313600--Sobic009G188000 Sobic001G313600--Sobic006G235100 Sobic001G313600--Sobic003G432700 Sobic001G313600--Sobic005G011300 Sobic001G313600--Sobic006G075400 Sobic001G304100 Sobic001G304100 Sobic001G313600--Sobic001G304100 Sobic001G313600--Sobic009G184000 Sobic001G112200 Sobic001G112200 Sobic009G184000--Sobic001G112200 Sobic009G184000--Sobic007G169700 Sobic009G184000--Sobic006G235100 Sobic009G184000--Sobic001G502400 Sobic009G184000--Sobic003G228900 Sobic009G184000--Sobic003G432700 Sobic001G138600 Sobic001G138600 Sobic009G184000--Sobic001G138600 Sobic008G066401 Sobic008G066401 Sobic009G184000--Sobic008G066401 Sobic002G189100 Sobic002G189100 Sobic009G184000--Sobic002G189100 Sobic006G075400--Sobic007G017500 Sobic004G294400 Sobic004G294400 Sobic006G075400--Sobic004G294400 Sobic006G075400--Sobic003G228900 Sobic003G043600 Sobic003G043600 Sobic006G075400--Sobic003G043600 Sobic003G268600 Sobic003G268600 Sobic006G075400--Sobic003G268600 Sobic001G330400 Sobic001G330400 Sobic006G075400--Sobic001G330400 Sobic006G075400--Sobic003G432700 Sobic006G075400--Sobic005G107900 Sobic006G075400--Sobic001G502400 Sobic001G169500--Sobic005G011300 Sobic001G169500--Sobic004G100700 Sobic005G099000 Sobic005G099000 Sobic001G169500--Sobic005G099000 Sobic003G382800 Sobic003G382800 Sobic001G169500--Sobic003G382800 Sobic004G336500 Sobic004G336500 Sobic001G169500--Sobic004G336500 Sobic001G169500--Sobic003G432700 Sobic006G249300 Sobic006G249300 Sobic001G169500--Sobic006G249300 Sobic001G169500--Sobic005G107900 Sobic002G068600 Sobic002G068600 Sobic001G169500--Sobic002G068600 Sobic007G169700--Sobic009G184000 Sobic007G169700--Sobic001G112200 Sobic007G169700--Sobic008G066401 Sobic007G169700--Sobic003G432700 Sobic009G145700 Sobic009G145700 Sobic007G169700--Sobic009G145700 Sobic007G169700--Sobic001G138600 Sobic001G318700 Sobic001G318700 Sobic007G169700--Sobic001G318700 Sobic003G043500 Sobic003G043500 Sobic007G169700--Sobic003G043500 Sobic007G169700--Sobic006G235100
Octagon: transcription factors


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