Gene annotation
Transcriptome id Sobic.005G099000.1
Synonym ATCHIA, CHIA, Sb05g008550
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
glycosyl hydrolase, putative, expressed
UniProt C5Y1P4
Pfam PF00704
Panther DB PTHR11177 PTHR11177:SF209
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0005975; carbohydrate metabolic process GO:0004553hydrolase activity, hydrolyzing O-glycosyl compounds


Orthologs (automatic annotation)
TAIR AT5G24090 : chitinase A
RAP-DB (Rice) LOC_Os11g47580.1 : glycosyl hydrolase, putative, expressed
MaizeGDB (Corn) Zm00025a043065 , Zm00025a043061 , Zm00025a029435
Brachypodium KQK09026 , KQJ91843
Barley HORVU5Hr1G081460.2 , HORVU5Hr1G081460.3 , HORVU5Hr1G081460.1 , HORVU5Hr1G081460.4
Wheat TraesCS1B02G064600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G063100 expressed protein -
2 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
3 Sobic.003G116800 cinnamoyl CoA reductase, putative, expressed K09753: cinnamoyl-CoA reductase
4 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
5 Sobic.001G169500 - -
6 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
7 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
8 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.001G108200 expressed protein -
10 Sobic.003G369100 AP2 domain containing protein, expressed -
11 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
12 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
13 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
14 Sobic.009G234100 WRKY49, expressed -
15 Sobic.009G151600 AP2 domain containing protein, expressed -
16 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
17 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
18 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
19 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
20 Sobic.004G301000 B-box (BBX) protein(PubMedID : 30626335)@B-box zinc finger family protein, putative, expressed -


Gene co-expression network
sample Sobic005G099000 Sobic005G099000 Sobic005G063100 Sobic005G063100 Sobic005G099000--Sobic005G063100 Sobic003G345100 Sobic003G345100 Sobic005G099000--Sobic003G345100 Sobic003G116800 Sobic003G116800 Sobic005G099000--Sobic003G116800 Sobic004G141200 Sobic004G141200 Sobic005G099000--Sobic004G141200 Sobic001G169500 Sobic001G169500 Sobic005G099000--Sobic001G169500 Sobic001G435000 Sobic001G435000 Sobic005G099000--Sobic001G435000 Sobic004G208700 Sobic004G208700 Sobic005G099000--Sobic004G208700 Sobic005G011300 Sobic005G011300 Sobic005G099000--Sobic005G011300 Sobic001G108200 Sobic001G108200 Sobic005G099000--Sobic001G108200 Sobic008G050600 Sobic008G050600 Sobic005G063100--Sobic008G050600 Sobic005G063100--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic005G063100--Sobic003G286600 Sobic001G140900 Sobic001G140900 Sobic005G063100--Sobic001G140900 Sobic005G063100--Sobic005G099000 Sobic009G234100 Sobic009G234100 Sobic005G063100--Sobic009G234100 Sobic005G091500 Sobic005G091500 Sobic005G063100--Sobic005G091500 Sobic005G063100--Sobic004G208700 Sobic005G063100--Sobic001G435000 Sobic003G345100--Sobic008G050600 Sobic003G345100--Sobic005G063100 Sobic009G164600 Sobic009G164600 Sobic003G345100--Sobic009G164600 Sobic003G345100--Sobic001G140900 Sobic003G345100--Sobic004G208700 Sobic003G345100--Sobic005G099000 Sobic009G159400 Sobic009G159400 Sobic003G345100--Sobic009G159400 Sobic003G369100 Sobic003G369100 Sobic003G345100--Sobic003G369100 Sobic003G345100--Sobic001G435000 Sobic003G116800--Sobic005G099000 Sobic003G116800--Sobic005G063100 Sobic003G116800--Sobic003G286600 Sobic003G116800--Sobic001G108200 Sobic003G116800--Sobic001G435000 Sobic010G176600 Sobic010G176600 Sobic003G116800--Sobic010G176600 Sobic004G301000 Sobic004G301000 Sobic003G116800--Sobic004G301000 Sobic004G229800 Sobic004G229800 Sobic003G116800--Sobic004G229800 Sobic003G116800--Sobic003G345100 Sobic004G141200--Sobic003G369100 Sobic004G141200--Sobic001G108200 Sobic007G074000 Sobic007G074000 Sobic004G141200--Sobic007G074000 Sobic003G393900 Sobic003G393900 Sobic004G141200--Sobic003G393900 Sobic001G459800 Sobic001G459800 Sobic004G141200--Sobic001G459800 Sobic004G304625 Sobic004G304625 Sobic004G141200--Sobic004G304625 Sobic001G138600 Sobic001G138600 Sobic004G141200--Sobic001G138600 Sobic001G391500 Sobic001G391500 Sobic004G141200--Sobic001G391500 Sobic004G100700 Sobic004G100700 Sobic004G141200--Sobic004G100700 Sobic001G169500--Sobic005G011300 Sobic001G169500--Sobic004G100700 Sobic001G169500--Sobic005G099000 Sobic003G382800 Sobic003G382800 Sobic001G169500--Sobic003G382800 Sobic004G336500 Sobic004G336500 Sobic001G169500--Sobic004G336500 Sobic003G432700 Sobic003G432700 Sobic001G169500--Sobic003G432700 Sobic006G249300 Sobic006G249300 Sobic001G169500--Sobic006G249300 Sobic005G107900 Sobic005G107900 Sobic001G169500--Sobic005G107900 Sobic002G068600 Sobic002G068600 Sobic001G169500--Sobic002G068600 Sobic001G435000--Sobic004G208700 Sobic001G435000--Sobic004G229800 Sobic001G435000--Sobic009G159400 Sobic007G155000 Sobic007G155000 Sobic001G435000--Sobic007G155000 Sobic001G435000--Sobic003G345100 Sobic001G435000--Sobic005G063100 Sobic001G435000--Sobic005G099000 Sobic001G435000--Sobic008G050600 Sobic001G435000--Sobic001G140900 Sobic004G208700--Sobic009G234100 Sobic004G208700--Sobic001G435000 Sobic004G208700--Sobic003G345100 Sobic004G208700--Sobic003G286600 Sobic004G208700--Sobic008G050600 Sobic004G208700--Sobic009G164600 Sobic004G208700--Sobic009G159400 Sobic004G208700--Sobic005G063100 Sobic004G208700--Sobic007G155000 Sobic005G011300--Sobic004G100700 Sobic005G011300--Sobic001G169500 Sobic002G188900 Sobic002G188900 Sobic005G011300--Sobic002G188900 Sobic005G011300--Sobic005G107900 Sobic005G011300--Sobic003G432700 Sobic005G011300--Sobic004G141200 Sobic005G011300--Sobic001G140900 Sobic003G084400 Sobic003G084400 Sobic005G011300--Sobic003G084400 Sobic004G171400 Sobic004G171400 Sobic005G011300--Sobic004G171400 Sobic001G108200--Sobic004G141200 Sobic001G108200--Sobic003G393900 Sobic001G108200--Sobic004G100700 Sobic001G108200--Sobic003G369100 Sobic003G086600 Sobic003G086600 Sobic001G108200--Sobic003G086600 Sobic003G355100 Sobic003G355100 Sobic001G108200--Sobic003G355100 Sobic007G214600 Sobic007G214600 Sobic001G108200--Sobic007G214600 Sobic001G108200--Sobic003G382800 Sobic001G108200--Sobic005G099000
Octagon: transcription factors


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