Gene annotation
Transcriptome id Sobic.003G345100.2,Sobic.003G345100.1
Synonym Sb03g038880
Functional annotation flavonol synthase/flavanone 3-hydroxylase, putative, expressed
UniProt C5XP04
Pfam PF03171 PF14226 PF14226 PF03171
Panther DB PTHR10209:SF155 PTHR10209 PTHR10209 PTHR10209:SF155
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity GO:0016491oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G11180 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os01g61610.3,LOC_Os01g61610.1 : flavonol synthase/flavanone 3-hydroxylase, putative, expressed
MaizeGDB (Corn) Zm00025a040720 , Zm00025a039721 , Zm00025a052680 , Zm00025a001977 , Zm00025a026996
Brachypodium KQK07885 , KQK10430 , KQK10429 , PNT73133 , KQK22172
Barley HORVU4Hr1G056500.4 , HORVU4Hr1G056500.5 , HORVU4Hr1G056500.1 , HORVU4Hr1G056500.2 , HORVU5Hr1G094280.1 , HORVU1Hr1G015050.7 , HORVU1Hr1G015050.5 , HORVU3Hr1G087570.1 , HORVU3Hr1G087570.2 , HORVU3Hr1G087570.3 , HORVU3Hr1G087570.4 , HORVU3Hr1G087560.2 , HORVU3Hr1G087560.1
Wheat TraesCS1D02G072700 , TraesCS3D02G345600 , TraesCS3A02G351400 , TraesCS3A02G351400 , TraesCS1A02G070200 , TraesCS1B02G088600 , TraesCS3B02G383900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
2 Sobic.005G063100 expressed protein -
3 Sobic.009G164600 ZOS1-14 - C2H2 zinc finger protein, expressed -
4 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
5 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
6 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -
7 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
8 Sobic.003G369100 AP2 domain containing protein, expressed -
9 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
10 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
11 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
12 Sobic.009G234100 WRKY49, expressed -
13 Sobic.005G051200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
14 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
15 Sobic.008G136400 expressed protein -
16 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
17 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
18 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
19 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
20 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor


Gene co-expression network
sample Sobic003G345100 Sobic003G345100 Sobic008G050600 Sobic008G050600 Sobic003G345100--Sobic008G050600 Sobic005G063100 Sobic005G063100 Sobic003G345100--Sobic005G063100 Sobic009G164600 Sobic009G164600 Sobic003G345100--Sobic009G164600 Sobic001G140900 Sobic001G140900 Sobic003G345100--Sobic001G140900 Sobic004G208700 Sobic004G208700 Sobic003G345100--Sobic004G208700 Sobic005G099000 Sobic005G099000 Sobic003G345100--Sobic005G099000 Sobic009G159400 Sobic009G159400 Sobic003G345100--Sobic009G159400 Sobic003G369100 Sobic003G369100 Sobic003G345100--Sobic003G369100 Sobic001G435000 Sobic001G435000 Sobic003G345100--Sobic001G435000 Sobic008G050600--Sobic003G345100 Sobic008G050600--Sobic001G140900 Sobic008G050600--Sobic005G063100 Sobic003G286600 Sobic003G286600 Sobic008G050600--Sobic003G286600 Sobic008G050600--Sobic009G164600 Sobic001G038900 Sobic001G038900 Sobic008G050600--Sobic001G038900 Sobic008G136400 Sobic008G136400 Sobic008G050600--Sobic008G136400 Sobic004G189400 Sobic004G189400 Sobic008G050600--Sobic004G189400 Sobic005G051200 Sobic005G051200 Sobic008G050600--Sobic005G051200 Sobic005G063100--Sobic008G050600 Sobic005G063100--Sobic003G345100 Sobic005G063100--Sobic003G286600 Sobic005G063100--Sobic001G140900 Sobic005G063100--Sobic005G099000 Sobic009G234100 Sobic009G234100 Sobic005G063100--Sobic009G234100 Sobic005G091500 Sobic005G091500 Sobic005G063100--Sobic005G091500 Sobic005G063100--Sobic004G208700 Sobic005G063100--Sobic001G435000 Sobic009G164600--Sobic003G345100 Sobic009G164600--Sobic008G050600 Sobic009G164600--Sobic005G051200 Sobic009G164600--Sobic004G208700 Sobic009G164600--Sobic003G286600 Sobic009G164600--Sobic005G063100 Sobic009G164600--Sobic001G140900 Sobic009G164600--Sobic009G234100 Sobic009G164600--Sobic001G435000 Sobic001G140900--Sobic008G050600 Sobic001G140900--Sobic003G345100 Sobic001G140900--Sobic001G038900 Sobic001G140900--Sobic005G063100 Sobic004G100700 Sobic004G100700 Sobic001G140900--Sobic004G100700 Sobic001G140900--Sobic003G369100 Sobic001G367600 Sobic001G367600 Sobic001G140900--Sobic001G367600 Sobic001G140900--Sobic008G136400 Sobic004G141200 Sobic004G141200 Sobic001G140900--Sobic004G141200 Sobic004G208700--Sobic009G234100 Sobic004G208700--Sobic001G435000 Sobic004G208700--Sobic003G345100 Sobic004G208700--Sobic003G286600 Sobic004G208700--Sobic008G050600 Sobic004G208700--Sobic009G164600 Sobic004G208700--Sobic009G159400 Sobic004G208700--Sobic005G063100 Sobic007G155000 Sobic007G155000 Sobic004G208700--Sobic007G155000 Sobic005G099000--Sobic005G063100 Sobic005G099000--Sobic003G345100 Sobic003G116800 Sobic003G116800 Sobic005G099000--Sobic003G116800 Sobic005G099000--Sobic004G141200 Sobic001G169500 Sobic001G169500 Sobic005G099000--Sobic001G169500 Sobic005G099000--Sobic001G435000 Sobic005G099000--Sobic004G208700 Sobic005G011300 Sobic005G011300 Sobic005G099000--Sobic005G011300 Sobic001G108200 Sobic001G108200 Sobic005G099000--Sobic001G108200 Sobic009G159400--Sobic001G038900 Sobic009G159400--Sobic001G435000 Sobic004G321300 Sobic004G321300 Sobic009G159400--Sobic004G321300 Sobic009G159400--Sobic003G345100 Sobic009G159400--Sobic004G208700 Sobic009G159400--Sobic001G140900 Sobic009G159400--Sobic008G050600 Sobic010G259600 Sobic010G259600 Sobic009G159400--Sobic010G259600 Sobic004G237800 Sobic004G237800 Sobic009G159400--Sobic004G237800 Sobic003G369100--Sobic004G141200 Sobic007G074000 Sobic007G074000 Sobic003G369100--Sobic007G074000 Sobic001G138600 Sobic001G138600 Sobic003G369100--Sobic001G138600 Sobic003G369100--Sobic001G108200 Sobic003G369100--Sobic001G140900 Sobic001G112200 Sobic001G112200 Sobic003G369100--Sobic001G112200 Sobic003G369100--Sobic003G345100 Sobic003G369100--Sobic008G050600 Sobic001G308300 Sobic001G308300 Sobic003G369100--Sobic001G308300 Sobic001G435000--Sobic004G208700 Sobic004G229800 Sobic004G229800 Sobic001G435000--Sobic004G229800 Sobic001G435000--Sobic009G159400 Sobic001G435000--Sobic007G155000 Sobic001G435000--Sobic003G345100 Sobic001G435000--Sobic005G063100 Sobic001G435000--Sobic005G099000 Sobic001G435000--Sobic008G050600 Sobic001G435000--Sobic001G140900
Octagon: transcription factors


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