Gene annotation
Transcriptome id Sobic.008G050600.2
Synonym ethylene response factor 89, Sb08g004260, ERF110, SbERF89
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
Not investigated (PubMedID : 23766026)
ethylene-responsive transcription factor ERF110, putative, expressed
UniProt A0A1Z5R4U8
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT2G33710 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os04g32620.1 : ethylene-responsive transcription factor ERF114, putative, expressed
MaizeGDB (Corn) Zm00025a022220 , Zm00025a054017 , Zm00025a055020 , Zm00025a029907 , Zm00025a005425 , Zm00025a021006 , Zm00025a000949
Brachypodium KQJ82323 , KQJ82324 , KQK10160 , PNT61078 , KQJ98629 , KQJ92086 , KQK00491 , KQK12503 , KQJ94686 , KQK01756 , KQK10781
Barley HORVU6Hr1G074970.3 , HORVU6Hr1G074970.2 , HORVU6Hr1G074970.1 , HORVU6Hr1G078520.1 , HORVU6Hr1G078520.2 , HORVU5Hr1G080790.4 , HORVU5Hr1G080790.3 , HORVU5Hr1G080790.2 , HORVU5Hr1G080790.1 , HORVU5Hr1G068450.1 , HORVU6Hr1G060140.3 , HORVU6Hr1G060140.1 , HORVU5Hr1G036590.1 , HORVU5Hr1G036590.2 , HORVU5Hr1G036590.3
Wheat TraesCS5D02G129400 , TraesCS5A02G112600 , TraesCS5B02G118200 , TraesCS7B02G162100 , TraesCS5B02G315500 , TraesCS5D02G320800 , TraesCS5B02G315500
Populus -


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cDNA sequences
Sobic.008G050600


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
2 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
3 Sobic.005G063100 expressed protein -
4 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
5 Sobic.009G164600 ZOS1-14 - C2H2 zinc finger protein, expressed -
6 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
7 Sobic.008G136400 expressed protein -
8 Sobic.004G189400 expressed protein -
9 Sobic.005G051200 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
10 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
11 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
12 Sobic.003G369100 AP2 domain containing protein, expressed -
13 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
14 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
15 Sobic.001G423800 DNA binding protein, putative, expressed -
16 Sobic.001G317200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
17 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -
19 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -
20 Sobic.009G234100 WRKY49, expressed -


Gene co-expression network
sample Sobic008G050600 Sobic008G050600 Sobic003G345100 Sobic003G345100 Sobic008G050600--Sobic003G345100 Sobic001G140900 Sobic001G140900 Sobic008G050600--Sobic001G140900 Sobic005G063100 Sobic005G063100 Sobic008G050600--Sobic005G063100 Sobic003G286600 Sobic003G286600 Sobic008G050600--Sobic003G286600 Sobic009G164600 Sobic009G164600 Sobic008G050600--Sobic009G164600 Sobic001G038900 Sobic001G038900 Sobic008G050600--Sobic001G038900 Sobic008G136400 Sobic008G136400 Sobic008G050600--Sobic008G136400 Sobic004G189400 Sobic004G189400 Sobic008G050600--Sobic004G189400 Sobic005G051200 Sobic005G051200 Sobic008G050600--Sobic005G051200 Sobic003G345100--Sobic008G050600 Sobic003G345100--Sobic005G063100 Sobic003G345100--Sobic009G164600 Sobic003G345100--Sobic001G140900 Sobic004G208700 Sobic004G208700 Sobic003G345100--Sobic004G208700 Sobic005G099000 Sobic005G099000 Sobic003G345100--Sobic005G099000 Sobic009G159400 Sobic009G159400 Sobic003G345100--Sobic009G159400 Sobic003G369100 Sobic003G369100 Sobic003G345100--Sobic003G369100 Sobic001G435000 Sobic001G435000 Sobic003G345100--Sobic001G435000 Sobic001G140900--Sobic008G050600 Sobic001G140900--Sobic003G345100 Sobic001G140900--Sobic001G038900 Sobic001G140900--Sobic005G063100 Sobic004G100700 Sobic004G100700 Sobic001G140900--Sobic004G100700 Sobic001G140900--Sobic003G369100 Sobic001G367600 Sobic001G367600 Sobic001G140900--Sobic001G367600 Sobic001G140900--Sobic008G136400 Sobic004G141200 Sobic004G141200 Sobic001G140900--Sobic004G141200 Sobic005G063100--Sobic008G050600 Sobic005G063100--Sobic003G345100 Sobic005G063100--Sobic003G286600 Sobic005G063100--Sobic001G140900 Sobic005G063100--Sobic005G099000 Sobic009G234100 Sobic009G234100 Sobic005G063100--Sobic009G234100 Sobic005G091500 Sobic005G091500 Sobic005G063100--Sobic005G091500 Sobic005G063100--Sobic004G208700 Sobic005G063100--Sobic001G435000 Sobic010G176600 Sobic010G176600 Sobic003G286600--Sobic010G176600 Sobic003G286600--Sobic008G050600 Sobic003G286600--Sobic005G063100 Sobic006G099900 Sobic006G099900 Sobic003G286600--Sobic006G099900 Sobic003G286600--Sobic004G208700 Sobic002G140400 Sobic002G140400 Sobic003G286600--Sobic002G140400 Sobic003G286600--Sobic003G345100 Sobic003G317100 Sobic003G317100 Sobic003G286600--Sobic003G317100 Sobic003G286600--Sobic009G164600 Sobic009G164600--Sobic003G345100 Sobic009G164600--Sobic008G050600 Sobic009G164600--Sobic005G051200 Sobic009G164600--Sobic004G208700 Sobic009G164600--Sobic003G286600 Sobic009G164600--Sobic005G063100 Sobic009G164600--Sobic001G140900 Sobic009G164600--Sobic009G234100 Sobic009G164600--Sobic001G435000 Sobic001G038900--Sobic002G140400 Sobic001G038900--Sobic001G140900 Sobic001G038900--Sobic008G136400 Sobic001G038900--Sobic008G050600 Sobic001G423800 Sobic001G423800 Sobic001G038900--Sobic001G423800 Sobic001G038900--Sobic009G159400 Sobic001G038900--Sobic003G345100 Sobic001G038900--Sobic001G367600 Sobic001G038900--Sobic004G189400 Sobic008G136400--Sobic001G038900 Sobic008G136400--Sobic008G050600 Sobic008G136400--Sobic002G140400 Sobic006G275200 Sobic006G275200 Sobic008G136400--Sobic006G275200 Sobic008G136400--Sobic001G140900 Sobic006G158600 Sobic006G158600 Sobic008G136400--Sobic006G158600 Sobic008G136400--Sobic004G189400 Sobic008G136400--Sobic001G423800 Sobic009G008900 Sobic009G008900 Sobic008G136400--Sobic009G008900 Sobic004G189400--Sobic002G140400 Sobic004G189400--Sobic005G091500 Sobic002G263400 Sobic002G263400 Sobic004G189400--Sobic002G263400 Sobic004G189400--Sobic008G050600 Sobic004G237800 Sobic004G237800 Sobic004G189400--Sobic004G237800 Sobic003G382600 Sobic003G382600 Sobic004G189400--Sobic003G382600 Sobic004G189400--Sobic006G099900 Sobic004G189400--Sobic008G136400 Sobic005G029200 Sobic005G029200 Sobic004G189400--Sobic005G029200 Sobic001G317200 Sobic001G317200 Sobic005G051200--Sobic001G317200 Sobic009G035200 Sobic009G035200 Sobic005G051200--Sobic009G035200 Sobic005G051200--Sobic008G050600 Sobic002G416600 Sobic002G416600 Sobic005G051200--Sobic002G416600 Sobic005G051200--Sobic009G164600 Sobic005G051200--Sobic003G345100 Sobic005G051200--Sobic003G286600 Sobic005G051200--Sobic005G063100 Sobic001G252300 Sobic001G252300 Sobic005G051200--Sobic001G252300
Octagon: transcription factors


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