Gene annotation
Transcriptome id Sobic.004G189400.1
Synonym Sb04g023760
Functional annotation expressed protein
UniProt C5XVP0
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os02g36530.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
3 Sobic.002G263400 expressed protein -
4 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
5 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
6 Sobic.003G382600 ARGOS, putative, expressed -
7 Sobic.006G099900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.008G136400 expressed protein -
9 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
10 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
11 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
12 Sobic.001G423800 DNA binding protein, putative, expressed -
13 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
14 Sobic.005G063100 expressed protein -
15 Sobic.003G286600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@sphingolipid C4-hydroxylase SUR2, putative, expressed K04713: sphinganine C4-monooxygenase
16 Sobic.004G148200 Cupin domain containing protein, expressed -
17 Sobic.007G227300 plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
19 Sobic.001G177800 ribosomal protein, putative, expressed K02866: RP-L10e, large subunit ribosomal protein L10e
20 Sobic.002G251000 expressed protein -


Gene co-expression network
sample Sobic004G189400 Sobic004G189400 Sobic002G140400 Sobic002G140400 Sobic004G189400--Sobic002G140400 Sobic005G091500 Sobic005G091500 Sobic004G189400--Sobic005G091500 Sobic002G263400 Sobic002G263400 Sobic004G189400--Sobic002G263400 Sobic008G050600 Sobic008G050600 Sobic004G189400--Sobic008G050600 Sobic004G237800 Sobic004G237800 Sobic004G189400--Sobic004G237800 Sobic003G382600 Sobic003G382600 Sobic004G189400--Sobic003G382600 Sobic006G099900 Sobic006G099900 Sobic004G189400--Sobic006G099900 Sobic008G136400 Sobic008G136400 Sobic004G189400--Sobic008G136400 Sobic005G029200 Sobic005G029200 Sobic004G189400--Sobic005G029200 Sobic001G038900 Sobic001G038900 Sobic002G140400--Sobic001G038900 Sobic002G140400--Sobic002G263400 Sobic002G140400--Sobic004G189400 Sobic001G423800 Sobic001G423800 Sobic002G140400--Sobic001G423800 Sobic002G140400--Sobic008G136400 Sobic007G074000 Sobic007G074000 Sobic002G140400--Sobic007G074000 Sobic002G140400--Sobic004G237800 Sobic002G140400--Sobic008G050600 Sobic003G286600 Sobic003G286600 Sobic002G140400--Sobic003G286600 Sobic005G091500--Sobic004G189400 Sobic005G091500--Sobic004G237800 Sobic005G063100 Sobic005G063100 Sobic005G091500--Sobic005G063100 Sobic005G091500--Sobic008G050600 Sobic002G055700 Sobic002G055700 Sobic005G091500--Sobic002G055700 Sobic005G091500--Sobic006G099900 Sobic005G091500--Sobic003G382600 Sobic009G159400 Sobic009G159400 Sobic005G091500--Sobic009G159400 Sobic005G091500--Sobic003G286600 Sobic002G263400--Sobic002G140400 Sobic002G263400--Sobic004G189400 Sobic003G282901 Sobic003G282901 Sobic002G263400--Sobic003G282901 Sobic004G243100 Sobic004G243100 Sobic002G263400--Sobic004G243100 Sobic001G018300 Sobic001G018300 Sobic002G263400--Sobic001G018300 Sobic002G263400--Sobic001G423800 Sobic002G192000 Sobic002G192000 Sobic002G263400--Sobic002G192000 Sobic001G231400 Sobic001G231400 Sobic002G263400--Sobic001G231400 Sobic003G322900 Sobic003G322900 Sobic002G263400--Sobic003G322900 Sobic003G345100 Sobic003G345100 Sobic008G050600--Sobic003G345100 Sobic001G140900 Sobic001G140900 Sobic008G050600--Sobic001G140900 Sobic008G050600--Sobic005G063100 Sobic008G050600--Sobic003G286600 Sobic009G164600 Sobic009G164600 Sobic008G050600--Sobic009G164600 Sobic008G050600--Sobic001G038900 Sobic008G050600--Sobic008G136400 Sobic008G050600--Sobic004G189400 Sobic005G051200 Sobic005G051200 Sobic008G050600--Sobic005G051200 Sobic004G237800--Sobic007G074000 Sobic004G321300 Sobic004G321300 Sobic004G237800--Sobic004G321300 Sobic002G336600 Sobic002G336600 Sobic004G237800--Sobic002G336600 Sobic004G237800--Sobic004G189400 Sobic004G237800--Sobic002G055700 Sobic004G237800--Sobic002G140400 Sobic004G237800--Sobic005G091500 Sobic001G112200 Sobic001G112200 Sobic004G237800--Sobic001G112200 Sobic004G237800--Sobic005G063100 Sobic003G382600--Sobic002G055700 Sobic003G382600--Sobic004G189400 Sobic002G338500 Sobic002G338500 Sobic003G382600--Sobic002G338500 Sobic002G353900 Sobic002G353900 Sobic003G382600--Sobic002G353900 Sobic003G303100 Sobic003G303100 Sobic003G382600--Sobic003G303100 Sobic003G382600--Sobic004G237800 Sobic003G382600--Sobic005G091500 Sobic003G382600--Sobic008G050600 Sobic003G043600 Sobic003G043600 Sobic003G382600--Sobic003G043600 Sobic007G227300 Sobic007G227300 Sobic006G099900--Sobic007G227300 Sobic003G252800 Sobic003G252800 Sobic006G099900--Sobic003G252800 Sobic001G317200 Sobic001G317200 Sobic006G099900--Sobic001G317200 Sobic006G099900--Sobic003G286600 Sobic010G084400 Sobic010G084400 Sobic006G099900--Sobic010G084400 Sobic006G099900--Sobic004G189400 Sobic006G099900--Sobic008G050600 Sobic006G099900--Sobic005G091500 Sobic006G277600 Sobic006G277600 Sobic006G099900--Sobic006G277600 Sobic008G136400--Sobic001G038900 Sobic008G136400--Sobic008G050600 Sobic008G136400--Sobic002G140400 Sobic006G275200 Sobic006G275200 Sobic008G136400--Sobic006G275200 Sobic008G136400--Sobic001G140900 Sobic006G158600 Sobic006G158600 Sobic008G136400--Sobic006G158600 Sobic008G136400--Sobic004G189400 Sobic008G136400--Sobic001G423800 Sobic009G008900 Sobic009G008900 Sobic008G136400--Sobic009G008900 Sobic005G029200--Sobic004G189400 Sobic004G148200 Sobic004G148200 Sobic005G029200--Sobic004G148200 Sobic003G297600 Sobic003G297600 Sobic005G029200--Sobic003G297600 Sobic010G213700 Sobic010G213700 Sobic005G029200--Sobic010G213700 Sobic005G029200--Sobic002G055700 Sobic005G029200--Sobic003G303100 Sobic009G077800 Sobic009G077800 Sobic005G029200--Sobic009G077800 Sobic009G139400 Sobic009G139400 Sobic005G029200--Sobic009G139400 Sobic005G029200--Sobic001G423800
Octagon: transcription factors


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