Gene annotation
Transcriptome id Sobic.009G159400.1
Synonym Sb09g022230
Functional annotation "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence." (PubMedID : 27586543)
universal stress protein domain containing protein, putative, expressed
UniProt C5YZ64
Pfam PF00582
Panther DB PTHR31964 PTHR31964:SF23
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006950; response to stress


Orthologs (automatic annotation)
TAIR AT3G53990 : Adenine nucleotide alpha hydrolases-like superfamily protein
RAP-DB (Rice) LOC_Os05g37970.3 : universal stress protein domain containing protein, putative, expressed
MaizeGDB (Corn) Zm00025a043878
Brachypodium KQK05956 , PNT71130
Barley -
Wheat TraesCS1A02G280700 , TraesCS1B02G289700 , TraesCS1D02G279800
Populus -


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cDNA sequences
Sobic.009G159400


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
2 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
3 Sobic.004G321300 Not investigated(PubMedID : 23766026)@AP2 domain containing protein, expressed K09286: EREBP-like factor
4 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
5 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
6 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
7 Sobic.008G050600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor ERF110, putative, expressed -
8 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
9 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
10 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
11 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.005G063100 expressed protein -
13 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
14 Sobic.003G352300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
15 Sobic.001G389000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@WRKY55, expressed -
16 Sobic.009G234100 WRKY49, expressed -
17 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
19 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
20 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -


Gene co-expression network
sample Sobic009G159400 Sobic009G159400 Sobic001G038900 Sobic001G038900 Sobic009G159400--Sobic001G038900 Sobic001G435000 Sobic001G435000 Sobic009G159400--Sobic001G435000 Sobic004G321300 Sobic004G321300 Sobic009G159400--Sobic004G321300 Sobic003G345100 Sobic003G345100 Sobic009G159400--Sobic003G345100 Sobic004G208700 Sobic004G208700 Sobic009G159400--Sobic004G208700 Sobic001G140900 Sobic001G140900 Sobic009G159400--Sobic001G140900 Sobic008G050600 Sobic008G050600 Sobic009G159400--Sobic008G050600 Sobic010G259600 Sobic010G259600 Sobic009G159400--Sobic010G259600 Sobic004G237800 Sobic004G237800 Sobic009G159400--Sobic004G237800 Sobic002G140400 Sobic002G140400 Sobic001G038900--Sobic002G140400 Sobic001G038900--Sobic001G140900 Sobic008G136400 Sobic008G136400 Sobic001G038900--Sobic008G136400 Sobic001G038900--Sobic008G050600 Sobic001G423800 Sobic001G423800 Sobic001G038900--Sobic001G423800 Sobic001G038900--Sobic009G159400 Sobic001G038900--Sobic003G345100 Sobic001G367600 Sobic001G367600 Sobic001G038900--Sobic001G367600 Sobic004G189400 Sobic004G189400 Sobic001G038900--Sobic004G189400 Sobic001G435000--Sobic004G208700 Sobic004G229800 Sobic004G229800 Sobic001G435000--Sobic004G229800 Sobic001G435000--Sobic009G159400 Sobic007G155000 Sobic007G155000 Sobic001G435000--Sobic007G155000 Sobic001G435000--Sobic003G345100 Sobic005G063100 Sobic005G063100 Sobic001G435000--Sobic005G063100 Sobic005G099000 Sobic005G099000 Sobic001G435000--Sobic005G099000 Sobic001G435000--Sobic008G050600 Sobic001G435000--Sobic001G140900 Sobic004G321300--Sobic004G237800 Sobic004G321300--Sobic009G159400 Sobic004G321300--Sobic008G136400 Sobic008G139600 Sobic008G139600 Sobic004G321300--Sobic008G139600 Sobic004G321300--Sobic001G038900 Sobic002G055700 Sobic002G055700 Sobic004G321300--Sobic002G055700 Sobic004G321300--Sobic001G140900 Sobic005G091500 Sobic005G091500 Sobic004G321300--Sobic005G091500 Sobic004G321300--Sobic003G345100 Sobic003G345100--Sobic008G050600 Sobic003G345100--Sobic005G063100 Sobic009G164600 Sobic009G164600 Sobic003G345100--Sobic009G164600 Sobic003G345100--Sobic001G140900 Sobic003G345100--Sobic004G208700 Sobic003G345100--Sobic005G099000 Sobic003G345100--Sobic009G159400 Sobic003G369100 Sobic003G369100 Sobic003G345100--Sobic003G369100 Sobic003G345100--Sobic001G435000 Sobic009G234100 Sobic009G234100 Sobic004G208700--Sobic009G234100 Sobic004G208700--Sobic001G435000 Sobic004G208700--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic004G208700--Sobic003G286600 Sobic004G208700--Sobic008G050600 Sobic004G208700--Sobic009G164600 Sobic004G208700--Sobic009G159400 Sobic004G208700--Sobic005G063100 Sobic004G208700--Sobic007G155000 Sobic001G140900--Sobic008G050600 Sobic001G140900--Sobic003G345100 Sobic001G140900--Sobic001G038900 Sobic001G140900--Sobic005G063100 Sobic004G100700 Sobic004G100700 Sobic001G140900--Sobic004G100700 Sobic001G140900--Sobic003G369100 Sobic001G140900--Sobic001G367600 Sobic001G140900--Sobic008G136400 Sobic004G141200 Sobic004G141200 Sobic001G140900--Sobic004G141200 Sobic008G050600--Sobic003G345100 Sobic008G050600--Sobic001G140900 Sobic008G050600--Sobic005G063100 Sobic008G050600--Sobic003G286600 Sobic008G050600--Sobic009G164600 Sobic008G050600--Sobic001G038900 Sobic008G050600--Sobic008G136400 Sobic008G050600--Sobic004G189400 Sobic005G051200 Sobic005G051200 Sobic008G050600--Sobic005G051200 Sobic010G259600--Sobic009G159400 Sobic003G352300 Sobic003G352300 Sobic010G259600--Sobic003G352300 Sobic010G259600--Sobic009G234100 Sobic002G125700 Sobic002G125700 Sobic010G259600--Sobic002G125700 Sobic007G087200 Sobic007G087200 Sobic010G259600--Sobic007G087200 Sobic009G231000 Sobic009G231000 Sobic010G259600--Sobic009G231000 Sobic010G259600--Sobic001G435000 Sobic003G255200 Sobic003G255200 Sobic010G259600--Sobic003G255200 Sobic002G017800 Sobic002G017800 Sobic010G259600--Sobic002G017800 Sobic007G074000 Sobic007G074000 Sobic004G237800--Sobic007G074000 Sobic004G237800--Sobic004G321300 Sobic002G336600 Sobic002G336600 Sobic004G237800--Sobic002G336600 Sobic004G237800--Sobic004G189400 Sobic004G237800--Sobic002G055700 Sobic004G237800--Sobic002G140400 Sobic004G237800--Sobic005G091500 Sobic001G112200 Sobic001G112200 Sobic004G237800--Sobic001G112200 Sobic004G237800--Sobic005G063100
Octagon: transcription factors


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