Gene annotation
Transcriptome id Sobic.009G151600.1,Sobic.009G151600.2
Synonym ERF110
Functional annotation AP2 domain containing protein, expressed
UniProt A0A1Z5R3R5 , A0A1B6P8M8
Pfam PF00847
Panther DB PTHR31190 PTHR31190:SF24
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006355; regulation of transcription, DNA-templated GO:0003700DNA-binding transcription factor activity


Orthologs (automatic annotation)
TAIR AT5G61890 : Integrase-type DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os05g36100.1 : AP2 domain containing protein, expressed
MaizeGDB (Corn) Zm00025a022220 , Zm00025a043851 , Zm00025a035951 , Zm00025a037299 , Zm00025a054017 , Zm00025a026695 , Zm00025a049596 , Zm00025a057002 , Zm00025a005425 , Zm00025a045338 , Zm00025a047609 , Zm00025a056053 , Zm00025a009843
Brachypodium KQJ82323 , KQJ82324 , PNT61078 , KQJ92086 , PNT61818 , PNT71180 , KQK19045 , KQK01756 , KQK10781
Barley HORVU3Hr1G030310.1 , HORVU6Hr1G078520.1 , HORVU6Hr1G078520.2 , HORVU5Hr1G080790.4 , HORVU5Hr1G080790.3 , HORVU5Hr1G080790.2 , HORVU5Hr1G080790.1 , HORVU5Hr1G068450.1 , HORVU5Hr1G036590.2 , HORVU5Hr1G036590.3
Wheat TraesCS5D02G129400 , TraesCS5A02G112600 , TraesCS3B02G412500 , TraesCS1A02G272300 , TraesCS5B02G118200 , TraesCS3D02G372900 , TraesCS1B02G282300 , TraesCS1D02G272600 , TraesCS5B02G315500 , TraesCS5D02G320800 , TraesCS5B02G315500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -
2 Sobic.005G063100 expressed protein -
3 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
4 Sobic.001G481100 DUF581 domain containing protein, expressed -
5 Sobic.003G369100 AP2 domain containing protein, expressed -
6 Sobic.002G333400 KI domain interacting kinase 1, putative, expressed -
7 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
8 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
9 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
10 Sobic.001G318700 glutathione S-transferase GSTU6, putative, expressed K00799: GST, glutathione S-transferase
11 Sobic.002G251000 expressed protein -
12 Sobic.001G138600 VQ domain containing protein, putative, expressed -
13 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
14 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
15 Sobic.010G176600 - -
16 Sobic.005G186100 SAG (Senescence-associated gene): up-regulated gene during salt-induced senescence.(PubMedID : 27586543)@patatin, putative, expressed -
17 Sobic.003G116800 cinnamoyl CoA reductase, putative, expressed K09753: cinnamoyl-CoA reductase
18 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
19 Sobic.002G140400 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.003G426400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic009G151600 Sobic009G151600 Sobic005G099000 Sobic005G099000 Sobic009G151600--Sobic005G099000 Sobic005G063100 Sobic005G063100 Sobic009G151600--Sobic005G063100 Sobic002G336600 Sobic002G336600 Sobic009G151600--Sobic002G336600 Sobic001G481100 Sobic001G481100 Sobic009G151600--Sobic001G481100 Sobic003G369100 Sobic003G369100 Sobic009G151600--Sobic003G369100 Sobic002G333400 Sobic002G333400 Sobic009G151600--Sobic002G333400 Sobic004G237800 Sobic004G237800 Sobic009G151600--Sobic004G237800 Sobic003G303100 Sobic003G303100 Sobic009G151600--Sobic003G303100 Sobic007G074000 Sobic007G074000 Sobic009G151600--Sobic007G074000 Sobic005G099000--Sobic005G063100 Sobic003G345100 Sobic003G345100 Sobic005G099000--Sobic003G345100 Sobic003G116800 Sobic003G116800 Sobic005G099000--Sobic003G116800 Sobic004G141200 Sobic004G141200 Sobic005G099000--Sobic004G141200 Sobic001G169500 Sobic001G169500 Sobic005G099000--Sobic001G169500 Sobic001G435000 Sobic001G435000 Sobic005G099000--Sobic001G435000 Sobic004G208700 Sobic004G208700 Sobic005G099000--Sobic004G208700 Sobic005G011300 Sobic005G011300 Sobic005G099000--Sobic005G011300 Sobic001G108200 Sobic001G108200 Sobic005G099000--Sobic001G108200 Sobic008G050600 Sobic008G050600 Sobic005G063100--Sobic008G050600 Sobic005G063100--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic005G063100--Sobic003G286600 Sobic001G140900 Sobic001G140900 Sobic005G063100--Sobic001G140900 Sobic005G063100--Sobic005G099000 Sobic009G234100 Sobic009G234100 Sobic005G063100--Sobic009G234100 Sobic005G091500 Sobic005G091500 Sobic005G063100--Sobic005G091500 Sobic005G063100--Sobic004G208700 Sobic005G063100--Sobic001G435000 Sobic002G336600--Sobic004G237800 Sobic002G336600--Sobic007G074000 Sobic002G336600--Sobic004G208700 Sobic004G229800 Sobic004G229800 Sobic002G336600--Sobic004G229800 Sobic002G336600--Sobic003G369100 Sobic002G336600--Sobic001G435000 Sobic002G140400 Sobic002G140400 Sobic002G336600--Sobic002G140400 Sobic002G336600--Sobic004G141200 Sobic002G336600--Sobic003G345100 Sobic003G228900 Sobic003G228900 Sobic001G481100--Sobic003G228900 Sobic006G075400 Sobic006G075400 Sobic001G481100--Sobic006G075400 Sobic001G318700 Sobic001G318700 Sobic001G481100--Sobic001G318700 Sobic001G481100--Sobic007G074000 Sobic001G256700 Sobic001G256700 Sobic001G481100--Sobic001G256700 Sobic003G202200 Sobic003G202200 Sobic001G481100--Sobic003G202200 Sobic001G079300 Sobic001G079300 Sobic001G481100--Sobic001G079300 Sobic004G301000 Sobic004G301000 Sobic001G481100--Sobic004G301000 Sobic002G251000 Sobic002G251000 Sobic001G481100--Sobic002G251000 Sobic003G369100--Sobic004G141200 Sobic003G369100--Sobic007G074000 Sobic001G138600 Sobic001G138600 Sobic003G369100--Sobic001G138600 Sobic003G369100--Sobic001G108200 Sobic003G369100--Sobic001G140900 Sobic001G112200 Sobic001G112200 Sobic003G369100--Sobic001G112200 Sobic003G369100--Sobic003G345100 Sobic003G369100--Sobic008G050600 Sobic001G308300 Sobic001G308300 Sobic003G369100--Sobic001G308300 Sobic001G407800 Sobic001G407800 Sobic002G333400--Sobic001G407800 Sobic006G158600 Sobic006G158600 Sobic002G333400--Sobic006G158600 Sobic006G056400 Sobic006G056400 Sobic002G333400--Sobic006G056400 Sobic008G136400 Sobic008G136400 Sobic002G333400--Sobic008G136400 Sobic005G186100 Sobic005G186100 Sobic002G333400--Sobic005G186100 Sobic002G333400--Sobic003G369100 Sobic002G333400--Sobic009G151600 Sobic002G333400--Sobic002G140400 Sobic002G333400--Sobic007G074000 Sobic004G237800--Sobic007G074000 Sobic004G321300 Sobic004G321300 Sobic004G237800--Sobic004G321300 Sobic004G237800--Sobic002G336600 Sobic004G189400 Sobic004G189400 Sobic004G237800--Sobic004G189400 Sobic002G055700 Sobic002G055700 Sobic004G237800--Sobic002G055700 Sobic004G237800--Sobic002G140400 Sobic004G237800--Sobic005G091500 Sobic004G237800--Sobic001G112200 Sobic004G237800--Sobic005G063100 Sobic003G303100--Sobic002G055700 Sobic003G303100--Sobic001G318700 Sobic003G303100--Sobic004G189400 Sobic003G382600 Sobic003G382600 Sobic003G303100--Sobic003G382600 Sobic003G303100--Sobic004G237800 Sobic003G426400 Sobic003G426400 Sobic003G303100--Sobic003G426400 Sobic004G148200 Sobic004G148200 Sobic003G303100--Sobic004G148200 Sobic005G029200 Sobic005G029200 Sobic003G303100--Sobic005G029200 Sobic003G303100--Sobic005G063100 Sobic007G074000--Sobic003G369100 Sobic007G074000--Sobic004G141200 Sobic007G074000--Sobic004G237800 Sobic007G074000--Sobic002G140400 Sobic007G074000--Sobic003G228900 Sobic007G074000--Sobic002G336600 Sobic003G364600 Sobic003G364600 Sobic007G074000--Sobic003G364600 Sobic007G074000--Sobic001G138600 Sobic009G247900 Sobic009G247900 Sobic007G074000--Sobic009G247900
Octagon: transcription factors


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