Gene annotation
Transcriptome id Sobic.001G318700.1
Synonym ATGSTU17, GST30B, GST30, ERD9, Sb01g030950
Functional annotation glutathione S-transferase GSTU6, putative, expressed
UniProt C5WUJ2
Pfam PF13410 PF02798
Panther DB PTHR11260 PTHR11260:SF278
NCBI CDD KOG0406; Glutathione S-transferase
KEGG Orthology K00799; GST, glutathione S-transferase
Gene Ontology GO:0005515; protein binding


Orthologs (automatic annotation)
TAIR AT1G10370 : Glutathione S-transferase family protein
RAP-DB (Rice) LOC_Os10g38489.1 : glutathione S-transferase GSTU6, putative, expressed
MaizeGDB (Corn) Zm00025a003100 , Zm00025a053627 , Zm00025a053626
Brachypodium KQJ97546 , KQJ97334 , KQJ97555
Barley HORVU1Hr1G049210.1 , HORVU1Hr1G049210.2 , HORVU1Hr1G049120.1
Wheat TraesCS1B02G194700 , TraesCS4A02G435300 , TraesCS1D02G189800 , TraesCS5D02G027500 , TraesCS1A02G186700 , TraesCS5D02G027300 , TraesCS7D02G044500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G112200 LTPL118 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
2 Sobic.001G018300 cytochrome P450 71E1, putative, expressed -
3 Sobic.004G243100 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
4 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
5 Sobic.003G303100 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@dynein light chain type 1 domain containing protein, expressed K10418: dynein light chain LC8-type
6 Sobic.002G251000 expressed protein -
7 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
8 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
9 Sobic.001G481100 DUF581 domain containing protein, expressed -
10 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
11 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
12 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
13 Sobic.004G141200 cytochrome P450, putative, expressed K00487: trans-cinnamate 4-monooxygenase
14 Sobic.007G074000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./middle senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@- -
15 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
16 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
17 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
18 Sobic.001G231400 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
19 Sobic.001G330400 ZOS3-11 - C2H2 zinc finger protein, expressed -
20 Sobic.003G369100 AP2 domain containing protein, expressed -


Gene co-expression network
sample Sobic001G318700 Sobic001G318700 Sobic001G112200 Sobic001G112200 Sobic001G318700--Sobic001G112200 Sobic001G018300 Sobic001G018300 Sobic001G318700--Sobic001G018300 Sobic004G243100 Sobic004G243100 Sobic001G318700--Sobic004G243100 Sobic002G192000 Sobic002G192000 Sobic001G318700--Sobic002G192000 Sobic003G303100 Sobic003G303100 Sobic001G318700--Sobic003G303100 Sobic002G251000 Sobic002G251000 Sobic001G318700--Sobic002G251000 Sobic001G140900 Sobic001G140900 Sobic001G318700--Sobic001G140900 Sobic006G075400 Sobic006G075400 Sobic001G318700--Sobic006G075400 Sobic001G481100 Sobic001G481100 Sobic001G318700--Sobic001G481100 Sobic009G184000 Sobic009G184000 Sobic001G112200--Sobic009G184000 Sobic001G112200--Sobic001G318700 Sobic001G138600 Sobic001G138600 Sobic001G112200--Sobic001G138600 Sobic003G369100 Sobic003G369100 Sobic001G112200--Sobic003G369100 Sobic007G169700 Sobic007G169700 Sobic001G112200--Sobic007G169700 Sobic004G237800 Sobic004G237800 Sobic001G112200--Sobic004G237800 Sobic009G145700 Sobic009G145700 Sobic001G112200--Sobic009G145700 Sobic007G074000 Sobic007G074000 Sobic001G112200--Sobic007G074000 Sobic001G310600 Sobic001G310600 Sobic001G112200--Sobic001G310600 Sobic001G018300--Sobic004G243100 Sobic001G231400 Sobic001G231400 Sobic001G018300--Sobic001G231400 Sobic001G018300--Sobic002G192000 Sobic001G018300--Sobic001G318700 Sobic001G423800 Sobic001G423800 Sobic001G018300--Sobic001G423800 Sobic002G263400 Sobic002G263400 Sobic001G018300--Sobic002G263400 Sobic004G229800 Sobic004G229800 Sobic001G018300--Sobic004G229800 Sobic001G367600 Sobic001G367600 Sobic001G018300--Sobic001G367600 Sobic007G155100 Sobic007G155100 Sobic001G018300--Sobic007G155100 Sobic004G243100--Sobic001G018300 Sobic004G243100--Sobic001G231400 Sobic009G224100 Sobic009G224100 Sobic004G243100--Sobic009G224100 Sobic004G243100--Sobic001G423800 Sobic002G139400 Sobic002G139400 Sobic004G243100--Sobic002G139400 Sobic004G243100--Sobic002G192000 Sobic004G243100--Sobic002G251000 Sobic003G282901 Sobic003G282901 Sobic004G243100--Sobic003G282901 Sobic004G243100--Sobic002G263400 Sobic002G192000--Sobic001G018300 Sobic002G192000--Sobic001G367600 Sobic002G192000--Sobic001G231400 Sobic002G192000--Sobic004G243100 Sobic006G158600 Sobic006G158600 Sobic002G192000--Sobic006G158600 Sobic002G192000--Sobic001G318700 Sobic001G038900 Sobic001G038900 Sobic002G192000--Sobic001G038900 Sobic002G140400 Sobic002G140400 Sobic002G192000--Sobic002G140400 Sobic002G192000--Sobic001G423800 Sobic002G055700 Sobic002G055700 Sobic003G303100--Sobic002G055700 Sobic003G303100--Sobic001G318700 Sobic004G189400 Sobic004G189400 Sobic003G303100--Sobic004G189400 Sobic003G382600 Sobic003G382600 Sobic003G303100--Sobic003G382600 Sobic003G303100--Sobic004G237800 Sobic003G426400 Sobic003G426400 Sobic003G303100--Sobic003G426400 Sobic004G148200 Sobic004G148200 Sobic003G303100--Sobic004G148200 Sobic005G029200 Sobic005G029200 Sobic003G303100--Sobic005G029200 Sobic005G063100 Sobic005G063100 Sobic003G303100--Sobic005G063100 Sobic002G251000--Sobic004G243100 Sobic002G251000--Sobic001G318700 Sobic002G251000--Sobic001G423800 Sobic002G251000--Sobic001G231400 Sobic002G251000--Sobic001G018300 Sobic001G192200 Sobic001G192200 Sobic002G251000--Sobic001G192200 Sobic002G251000--Sobic003G282901 Sobic002G251000--Sobic002G140400 Sobic002G251000--Sobic004G189400 Sobic008G050600 Sobic008G050600 Sobic001G140900--Sobic008G050600 Sobic003G345100 Sobic003G345100 Sobic001G140900--Sobic003G345100 Sobic001G140900--Sobic001G038900 Sobic001G140900--Sobic005G063100 Sobic004G100700 Sobic004G100700 Sobic001G140900--Sobic004G100700 Sobic001G140900--Sobic003G369100 Sobic001G140900--Sobic001G367600 Sobic008G136400 Sobic008G136400 Sobic001G140900--Sobic008G136400 Sobic004G141200 Sobic004G141200 Sobic001G140900--Sobic004G141200 Sobic007G017500 Sobic007G017500 Sobic006G075400--Sobic007G017500 Sobic004G294400 Sobic004G294400 Sobic006G075400--Sobic004G294400 Sobic003G228900 Sobic003G228900 Sobic006G075400--Sobic003G228900 Sobic003G043600 Sobic003G043600 Sobic006G075400--Sobic003G043600 Sobic003G268600 Sobic003G268600 Sobic006G075400--Sobic003G268600 Sobic001G330400 Sobic001G330400 Sobic006G075400--Sobic001G330400 Sobic003G432700 Sobic003G432700 Sobic006G075400--Sobic003G432700 Sobic005G107900 Sobic005G107900 Sobic006G075400--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic006G075400--Sobic001G502400 Sobic001G481100--Sobic003G228900 Sobic001G481100--Sobic006G075400 Sobic001G481100--Sobic001G318700 Sobic001G481100--Sobic007G074000 Sobic001G256700 Sobic001G256700 Sobic001G481100--Sobic001G256700 Sobic003G202200 Sobic003G202200 Sobic001G481100--Sobic003G202200 Sobic001G079300 Sobic001G079300 Sobic001G481100--Sobic001G079300 Sobic004G301000 Sobic004G301000 Sobic001G481100--Sobic004G301000 Sobic001G481100--Sobic002G251000
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.