Gene annotation
Transcriptome id Sobic.005G107900.1
Synonym Sb05g010100,
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
Protein O-methyltransferase ZRP4 (Zm) (PubMedID : 27208977)
O-methyltransferase, putative, expressed
UniProt C5Y220
Pfam PF08100 PF00891
Panther DB PTHR11746 PTHR11746:SF94
NCBI CDD KOG3178; Hydroxyindole-O-methyltransferase and related SAM-dependent methyltransferases
KEGG Orthology -
Gene Ontology GO:0008171; O-methyltransferase activity


Orthologs (automatic annotation)
TAIR AT4G35160 : O-methyltransferase family protein
RAP-DB (Rice) LOC_Os11g20090.1 : O-methyltransferase, putative, expressed
MaizeGDB (Corn) Zm00025a012594
Brachypodium -
Barley HORVU5Hr1G066150.1 , HORVU3Hr1G029150.2 , HORVU3Hr1G029150.3 , HORVU3Hr1G029150.1 , HORVU5Hr1G066150.2
Wheat TraesCS4B02G075100 , TraesCS4D02G073600 , TraesCS4D02G073800 , TraesCS4B02G075000 , TraesCS4D02G073700
Populus PNT12018


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G502400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed -
2 Sobic.001G313600 heavy metal-associated domain containing protein, expressed -
3 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
4 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.006G235100 expressed protein -
6 Sobic.006G075400 U-box domain-containing protein, putative, expressed -
7 Sobic.009G184000 ICE-like protease p20 domain containing protein, putative, expressed -
8 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
9 Sobic.001G169500 - -
10 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
12 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -
13 Sobic.003G228900 cytochrome P450 72A1, putative, expressed -
14 Sobic.007G017500 FAD-binding and arabino-lactone oxidase domains containing protein, putative, expressed -
15 Sobic.003G043600 BAHD acyl transferase(PubMedID : 28944535)@transferase family protein, putative, expressed -
16 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
17 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
18 Sobic.001G310600 expressed protein -
19 Sobic.003G260300 MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
20 Sobic.006G132900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -


Gene co-expression network
sample Sobic005G107900 Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic005G107900--Sobic001G502400 Sobic001G313600 Sobic001G313600 Sobic005G107900--Sobic001G313600 Sobic003G432700 Sobic003G432700 Sobic005G107900--Sobic003G432700 Sobic005G011300 Sobic005G011300 Sobic005G107900--Sobic005G011300 Sobic006G235100 Sobic006G235100 Sobic005G107900--Sobic006G235100 Sobic006G075400 Sobic006G075400 Sobic005G107900--Sobic006G075400 Sobic009G184000 Sobic009G184000 Sobic005G107900--Sobic009G184000 Sobic009G188000 Sobic009G188000 Sobic005G107900--Sobic009G188000 Sobic001G169500 Sobic001G169500 Sobic005G107900--Sobic001G169500 Sobic001G502400--Sobic005G107900 Sobic001G502400--Sobic001G313600 Sobic001G502400--Sobic006G235100 Sobic001G502400--Sobic003G432700 Sobic001G502400--Sobic009G184000 Sobic001G502400--Sobic006G075400 Sobic001G502400--Sobic009G188000 Sobic001G502400--Sobic005G011300 Sobic006G007900 Sobic006G007900 Sobic001G502400--Sobic006G007900 Sobic001G313600--Sobic005G107900 Sobic001G313600--Sobic001G502400 Sobic001G313600--Sobic009G188000 Sobic001G313600--Sobic006G235100 Sobic001G313600--Sobic003G432700 Sobic001G313600--Sobic005G011300 Sobic001G313600--Sobic006G075400 Sobic001G304100 Sobic001G304100 Sobic001G313600--Sobic001G304100 Sobic001G313600--Sobic009G184000 Sobic003G432700--Sobic005G107900 Sobic003G432700--Sobic001G502400 Sobic003G228900 Sobic003G228900 Sobic003G432700--Sobic003G228900 Sobic003G432700--Sobic005G011300 Sobic003G432700--Sobic001G313600 Sobic003G432700--Sobic009G184000 Sobic003G432700--Sobic006G075400 Sobic003G432700--Sobic001G169500 Sobic007G169700 Sobic007G169700 Sobic003G432700--Sobic007G169700 Sobic004G100700 Sobic004G100700 Sobic005G011300--Sobic004G100700 Sobic005G011300--Sobic001G169500 Sobic002G188900 Sobic002G188900 Sobic005G011300--Sobic002G188900 Sobic005G011300--Sobic005G107900 Sobic005G011300--Sobic003G432700 Sobic004G141200 Sobic004G141200 Sobic005G011300--Sobic004G141200 Sobic001G140900 Sobic001G140900 Sobic005G011300--Sobic001G140900 Sobic003G084400 Sobic003G084400 Sobic005G011300--Sobic003G084400 Sobic004G171400 Sobic004G171400 Sobic005G011300--Sobic004G171400 Sobic006G235100--Sobic001G502400 Sobic006G235100--Sobic006G007900 Sobic006G235100--Sobic001G313600 Sobic006G235100--Sobic009G184000 Sobic006G235100--Sobic005G107900 Sobic003G442100 Sobic003G442100 Sobic006G235100--Sobic003G442100 Sobic004G141100 Sobic004G141100 Sobic006G235100--Sobic004G141100 Sobic006G235100--Sobic006G075400 Sobic006G235100--Sobic003G432700 Sobic007G017500 Sobic007G017500 Sobic006G075400--Sobic007G017500 Sobic004G294400 Sobic004G294400 Sobic006G075400--Sobic004G294400 Sobic006G075400--Sobic003G228900 Sobic003G043600 Sobic003G043600 Sobic006G075400--Sobic003G043600 Sobic003G268600 Sobic003G268600 Sobic006G075400--Sobic003G268600 Sobic001G330400 Sobic001G330400 Sobic006G075400--Sobic001G330400 Sobic006G075400--Sobic003G432700 Sobic006G075400--Sobic005G107900 Sobic006G075400--Sobic001G502400 Sobic001G112200 Sobic001G112200 Sobic009G184000--Sobic001G112200 Sobic009G184000--Sobic007G169700 Sobic009G184000--Sobic006G235100 Sobic009G184000--Sobic001G502400 Sobic009G184000--Sobic003G228900 Sobic009G184000--Sobic003G432700 Sobic001G138600 Sobic001G138600 Sobic009G184000--Sobic001G138600 Sobic008G066401 Sobic008G066401 Sobic009G184000--Sobic008G066401 Sobic002G189100 Sobic002G189100 Sobic009G184000--Sobic002G189100 Sobic009G188000--Sobic001G313600 Sobic009G188000--Sobic001G304100 Sobic009G188000--Sobic005G107900 Sobic009G188000--Sobic001G502400 Sobic001G238400 Sobic001G238400 Sobic009G188000--Sobic001G238400 Sobic009G188000--Sobic006G235100 Sobic009G188000--Sobic003G084400 Sobic008G009400 Sobic008G009400 Sobic009G188000--Sobic008G009400 Sobic001G295200 Sobic001G295200 Sobic009G188000--Sobic001G295200 Sobic001G169500--Sobic005G011300 Sobic001G169500--Sobic004G100700 Sobic005G099000 Sobic005G099000 Sobic001G169500--Sobic005G099000 Sobic003G382800 Sobic003G382800 Sobic001G169500--Sobic003G382800 Sobic004G336500 Sobic004G336500 Sobic001G169500--Sobic004G336500 Sobic001G169500--Sobic003G432700 Sobic006G249300 Sobic006G249300 Sobic001G169500--Sobic006G249300 Sobic001G169500--Sobic005G107900 Sobic002G068600 Sobic002G068600 Sobic001G169500--Sobic002G068600
Octagon: transcription factors


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