Gene annotation
Transcriptome id Sobic.006G132900.1
Synonym Sb06g021280
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence (PubMedID : 27586543)
expressed protein
UniProt C5YBF3
Pfam PF04862
Panther DB PTHR31265 PTHR31265:SF7
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G11420 : Protein of unknown function, DUF642
RAP-DB (Rice) LOC_Os04g41740.1 : expressed protein
MaizeGDB (Corn) Zm00025a019468 , Zm00025a010836 , Zm00025a010851 , Zm00025a010850 , Zm00025a010842 , Zm00025a010843 , Zm00025a056374
Brachypodium KQJ83354 , KQJ83352 , KQJ84583 , KQJ84582 , KQK08682
Barley HORVU2Hr1G085430.2 , HORVU2Hr1G085430.3 , HORVU2Hr1G085430.1 , HORVU2Hr1G085370.5 , HORVU2Hr1G085370.4 , HORVU2Hr1G085370.6 , HORVU2Hr1G085370.3 , HORVU2Hr1G085370.2 , HORVU5Hr1G094750.4 , HORVU5Hr1G094750.2 , HORVU5Hr1G094750.3 , HORVU5Hr1G094750.1 , HORVU2Hr1G085340.8 , HORVU2Hr1G085340.1 , HORVU2Hr1G085340.2 , HORVU2Hr1G085340.3 , HORVU2Hr1G085340.4 , HORVU2Hr1G085340.5 , HORVU2Hr1G085340.6 , HORVU2Hr1G085340.7
Wheat TraesCS2B02G369500 , TraesCS2B02G440300 , TraesCS2D02G349700 , TraesCS2B02G369300 , TraesCS2A02G351500 , TraesCS2D02G349800 , TraesCS2A02G351400 , TraesCS2B02G369800 , TraesCS5B02G390400 , TraesCS2D02G349500 , TraesCS5A02G385400 , TraesCS2D02G349200 , TraesCS2A02G351200 , TraesCS5D02G395400 , TraesCS2A02G351600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G502400 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@RING-H2 finger protein ATL3F, putative, expressed -
2 Sobic.006G234800 expressed protein -
3 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
4 Sobic.001G313600 heavy metal-associated domain containing protein, expressed -
5 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
6 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
7 Sobic.001G435000 gibberellin receptor GID1L2, putative, expressed -
8 Sobic.004G229800 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@cytokinin-O-glucosyltransferase 2, putative, expressed -
9 Sobic.001G238400 expansin precursor, putative, expressed -
10 Sobic.001G279500 VQ domain containing protein, putative, expressed -
11 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
12 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
13 Sobic.005G213500 leucoanthocyanidin dioxygenase, putative, expressed -
14 Sobic.007G155000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@bifunctional monodehydroascorbate reductase and carbonic anhydrasenectarin-3 precursor, putative, expressed K01674: carbonic anhydrase
15 Sobic.010G259500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
16 Sobic.001G433900 PLA IIIA/PLP7, putative, expressed -
17 Sobic.001G231700 oxidoreductase, short chain dehydrogenase/reductase family domain containing protein, expressed K00059: fabG, 3-oxoacyl-[acyl-carrier protein] reductase
18 Sobic.001G310600 expressed protein -
19 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
20 Sobic.007G057000 expressed protein -


Gene co-expression network
sample Sobic006G132900 Sobic006G132900 Sobic001G502400 Sobic001G502400 Sobic006G132900--Sobic001G502400 Sobic006G234800 Sobic006G234800 Sobic006G132900--Sobic006G234800 Sobic005G107900 Sobic005G107900 Sobic006G132900--Sobic005G107900 Sobic001G313600 Sobic001G313600 Sobic006G132900--Sobic001G313600 Sobic002G188900 Sobic002G188900 Sobic006G132900--Sobic002G188900 Sobic001G304100 Sobic001G304100 Sobic006G132900--Sobic001G304100 Sobic001G435000 Sobic001G435000 Sobic006G132900--Sobic001G435000 Sobic004G229800 Sobic004G229800 Sobic006G132900--Sobic004G229800 Sobic001G238400 Sobic001G238400 Sobic006G132900--Sobic001G238400 Sobic001G502400--Sobic005G107900 Sobic001G502400--Sobic001G313600 Sobic006G235100 Sobic006G235100 Sobic001G502400--Sobic006G235100 Sobic003G432700 Sobic003G432700 Sobic001G502400--Sobic003G432700 Sobic009G184000 Sobic009G184000 Sobic001G502400--Sobic009G184000 Sobic006G075400 Sobic006G075400 Sobic001G502400--Sobic006G075400 Sobic009G188000 Sobic009G188000 Sobic001G502400--Sobic009G188000 Sobic005G011300 Sobic005G011300 Sobic001G502400--Sobic005G011300 Sobic006G007900 Sobic006G007900 Sobic001G502400--Sobic006G007900 Sobic006G234800--Sobic001G435000 Sobic001G231700 Sobic001G231700 Sobic006G234800--Sobic001G231700 Sobic006G234800--Sobic004G229800 Sobic006G234800--Sobic001G304100 Sobic006G234800--Sobic006G132900 Sobic001G402200 Sobic001G402200 Sobic006G234800--Sobic001G402200 Sobic001G367600 Sobic001G367600 Sobic006G234800--Sobic001G367600 Sobic007G017500 Sobic007G017500 Sobic006G234800--Sobic007G017500 Sobic006G234800--Sobic006G075400 Sobic005G107900--Sobic001G502400 Sobic005G107900--Sobic001G313600 Sobic005G107900--Sobic003G432700 Sobic005G107900--Sobic005G011300 Sobic005G107900--Sobic006G235100 Sobic005G107900--Sobic006G075400 Sobic005G107900--Sobic009G184000 Sobic005G107900--Sobic009G188000 Sobic001G169500 Sobic001G169500 Sobic005G107900--Sobic001G169500 Sobic001G313600--Sobic005G107900 Sobic001G313600--Sobic001G502400 Sobic001G313600--Sobic009G188000 Sobic001G313600--Sobic006G235100 Sobic001G313600--Sobic003G432700 Sobic001G313600--Sobic005G011300 Sobic001G313600--Sobic006G075400 Sobic001G313600--Sobic001G304100 Sobic001G313600--Sobic009G184000 Sobic004G100700 Sobic004G100700 Sobic002G188900--Sobic004G100700 Sobic002G188900--Sobic005G011300 Sobic003G033900 Sobic003G033900 Sobic002G188900--Sobic003G033900 Sobic001G140900 Sobic001G140900 Sobic002G188900--Sobic001G140900 Sobic004G141200 Sobic004G141200 Sobic002G188900--Sobic004G141200 Sobic003G393900 Sobic003G393900 Sobic002G188900--Sobic003G393900 Sobic001G108200 Sobic001G108200 Sobic002G188900--Sobic001G108200 Sobic004G304625 Sobic004G304625 Sobic002G188900--Sobic004G304625 Sobic007G057000 Sobic007G057000 Sobic002G188900--Sobic007G057000 Sobic001G304100--Sobic009G188000 Sobic001G304100--Sobic001G238400 Sobic001G302600 Sobic001G302600 Sobic001G304100--Sobic001G302600 Sobic002G213600 Sobic002G213600 Sobic001G304100--Sobic002G213600 Sobic003G084400 Sobic003G084400 Sobic001G304100--Sobic003G084400 Sobic001G304100--Sobic001G313600 Sobic001G304100--Sobic005G107900 Sobic003G417200 Sobic003G417200 Sobic001G304100--Sobic003G417200 Sobic001G304100--Sobic006G234800 Sobic004G208700 Sobic004G208700 Sobic001G435000--Sobic004G208700 Sobic001G435000--Sobic004G229800 Sobic009G159400 Sobic009G159400 Sobic001G435000--Sobic009G159400 Sobic007G155000 Sobic007G155000 Sobic001G435000--Sobic007G155000 Sobic003G345100 Sobic003G345100 Sobic001G435000--Sobic003G345100 Sobic005G063100 Sobic005G063100 Sobic001G435000--Sobic005G063100 Sobic005G099000 Sobic005G099000 Sobic001G435000--Sobic005G099000 Sobic008G050600 Sobic008G050600 Sobic001G435000--Sobic008G050600 Sobic001G435000--Sobic001G140900 Sobic004G229800--Sobic001G435000 Sobic007G036900 Sobic007G036900 Sobic004G229800--Sobic007G036900 Sobic001G018300 Sobic001G018300 Sobic004G229800--Sobic001G018300 Sobic002G336600 Sobic002G336600 Sobic004G229800--Sobic002G336600 Sobic004G229800--Sobic004G141200 Sobic004G229800--Sobic002G188900 Sobic004G229800--Sobic004G208700 Sobic004G004500 Sobic004G004500 Sobic004G229800--Sobic004G004500 Sobic002G140400 Sobic002G140400 Sobic004G229800--Sobic002G140400 Sobic001G238400--Sobic001G304100 Sobic001G237900 Sobic001G237900 Sobic001G238400--Sobic001G237900 Sobic003G007600 Sobic003G007600 Sobic001G238400--Sobic003G007600 Sobic001G238400--Sobic009G188000 Sobic004G318700 Sobic004G318700 Sobic001G238400--Sobic004G318700 Sobic003G299300 Sobic003G299300 Sobic001G238400--Sobic003G299300 Sobic004G292900 Sobic004G292900 Sobic001G238400--Sobic004G292900 Sobic001G238400--Sobic006G234800 Sobic001G238400--Sobic006G132900
Octagon: transcription factors


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