Gene annotation
Transcriptome id Sobic.005G213500.1
Synonym Sb05g026540
Functional annotation leucoanthocyanidin dioxygenase, putative, expressed
UniProt A0A1B6PTW8
Pfam PF03171 PF14226
Panther DB PTHR10209 PTHR10209:SF157
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT5G20400 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os06g08060.1 : leucoanthocyanidin dioxygenase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.010G156500 expressed protein -
2 Sobic.003G364000 glycosyl hydrolase, putative, expressed K01183: chitinase
3 Sobic.005G213600 Deletion of the Low Germination Stimulant 1 (LGS1) gene gives a Striga‐resistance trait in sorghum. Strigolactone precursor 18-hydroxycarlactonoic acid (18-OH-CLA) is a substrate for LGS1.(PubMedID : 34525227)@sulfotransferase domain containing protein, expressed -
4 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.006G132900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
6 Sobic.002G338500 sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
7 Sobic.010G043900 expressed protein -
8 Sobic.010G259500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
9 Sobic.005G005600 prenylated rab acceptor, putative, expressed -
10 Sobic.002G338450 - -
11 Sobic.001G279500 VQ domain containing protein, putative, expressed -
12 Sobic.007G030400 expressed protein -
13 Sobic.010G088700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
14 Sobic.001G310600 expressed protein -
15 Sobic.001G238400 expansin precursor, putative, expressed -
16 Sobic.001G433900 PLA IIIA/PLP7, putative, expressed -
17 Sobic.009G217700 - -
18 Sobic.003G382600 ARGOS, putative, expressed -
19 Sobic.008G044300 U-box domain-containing protein, putative, expressed -
20 Sobic.003G442100 "Phylogenetic analysis of canonical DREB1 and DREB2 genes in sorghum with those genes in maize, rice, and Arabidopsis. "(PubMedID : 24086146)@Not investigated(PubMedID : 23766026)@dehydration-responsive element-binding protein, putative, expressed -


Gene co-expression network
sample Sobic005G213500 Sobic005G213500 Sobic010G156500 Sobic010G156500 Sobic005G213500--Sobic010G156500 Sobic003G364000 Sobic003G364000 Sobic005G213500--Sobic003G364000 Sobic005G213600 Sobic005G213600 Sobic005G213500--Sobic005G213600 Sobic003G364300 Sobic003G364300 Sobic005G213500--Sobic003G364300 Sobic006G132900 Sobic006G132900 Sobic005G213500--Sobic006G132900 Sobic002G338500 Sobic002G338500 Sobic005G213500--Sobic002G338500 Sobic010G043900 Sobic010G043900 Sobic005G213500--Sobic010G043900 Sobic010G259500 Sobic010G259500 Sobic005G213500--Sobic010G259500 Sobic005G005600 Sobic005G005600 Sobic005G213500--Sobic005G005600 Sobic010G156500--Sobic003G364300 Sobic010G156500--Sobic002G338500 Sobic010G156500--Sobic003G364000 Sobic003G382600 Sobic003G382600 Sobic010G156500--Sobic003G382600 Sobic010G156500--Sobic005G213500 Sobic001G279500 Sobic001G279500 Sobic010G156500--Sobic001G279500 Sobic002G302500 Sobic002G302500 Sobic010G156500--Sobic002G302500 Sobic003G280200 Sobic003G280200 Sobic010G156500--Sobic003G280200 Sobic009G231000 Sobic009G231000 Sobic010G156500--Sobic009G231000 Sobic010G088700 Sobic010G088700 Sobic003G364000--Sobic010G088700 Sobic009G217700 Sobic009G217700 Sobic003G364000--Sobic009G217700 Sobic003G364000--Sobic010G156500 Sobic003G364000--Sobic003G364300 Sobic003G364000--Sobic003G280200 Sobic003G364000--Sobic010G259500 Sobic003G364000--Sobic005G213500 Sobic002G034800 Sobic002G034800 Sobic003G364000--Sobic002G034800 Sobic003G364000--Sobic003G382600 Sobic005G213600--Sobic010G156500 Sobic005G213600--Sobic005G213500 Sobic005G213600--Sobic010G043900 Sobic005G213600--Sobic003G364300 Sobic001G238400 Sobic001G238400 Sobic005G213600--Sobic001G238400 Sobic005G107900 Sobic005G107900 Sobic005G213600--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic005G213600--Sobic001G502400 Sobic007G008100 Sobic007G008100 Sobic005G213600--Sobic007G008100 Sobic001G313600 Sobic001G313600 Sobic005G213600--Sobic001G313600 Sobic003G364300--Sobic010G156500 Sobic003G364300--Sobic009G231000 Sobic003G364300--Sobic002G338500 Sobic003G364300--Sobic003G364000 Sobic003G364300--Sobic007G008100 Sobic002G042000 Sobic002G042000 Sobic003G364300--Sobic002G042000 Sobic003G364300--Sobic003G382600 Sobic001G054500 Sobic001G054500 Sobic003G364300--Sobic001G054500 Sobic003G364300--Sobic002G302500 Sobic006G132900--Sobic001G502400 Sobic006G234800 Sobic006G234800 Sobic006G132900--Sobic006G234800 Sobic006G132900--Sobic005G107900 Sobic006G132900--Sobic001G313600 Sobic002G188900 Sobic002G188900 Sobic006G132900--Sobic002G188900 Sobic001G304100 Sobic001G304100 Sobic006G132900--Sobic001G304100 Sobic001G435000 Sobic001G435000 Sobic006G132900--Sobic001G435000 Sobic004G229800 Sobic004G229800 Sobic006G132900--Sobic004G229800 Sobic006G132900--Sobic001G238400 Sobic003G043600 Sobic003G043600 Sobic002G338500--Sobic003G043600 Sobic002G338500--Sobic003G382600 Sobic002G055700 Sobic002G055700 Sobic002G338500--Sobic002G055700 Sobic002G338500--Sobic010G156500 Sobic002G338500--Sobic003G364300 Sobic009G145500 Sobic009G145500 Sobic002G338500--Sobic009G145500 Sobic009G145700 Sobic009G145700 Sobic002G338500--Sobic009G145700 Sobic002G353900 Sobic002G353900 Sobic002G338500--Sobic002G353900 Sobic005G196800 Sobic005G196800 Sobic002G338500--Sobic005G196800 Sobic010G043900--Sobic002G338500 Sobic008G027600 Sobic008G027600 Sobic010G043900--Sobic008G027600 Sobic002G422300 Sobic002G422300 Sobic010G043900--Sobic002G422300 Sobic010G043900--Sobic005G213600 Sobic006G158400 Sobic006G158400 Sobic010G043900--Sobic006G158400 Sobic010G043900--Sobic001G238400 Sobic003G026400 Sobic003G026400 Sobic010G043900--Sobic003G026400 Sobic010G043900--Sobic003G043600 Sobic010G043900--Sobic005G213500 Sobic001G365100 Sobic001G365100 Sobic010G259500--Sobic001G365100 Sobic001G402200 Sobic001G402200 Sobic010G259500--Sobic001G402200 Sobic007G039600 Sobic007G039600 Sobic010G259500--Sobic007G039600 Sobic010G259500--Sobic003G364000 Sobic007G155100 Sobic007G155100 Sobic010G259500--Sobic007G155100 Sobic003G307801 Sobic003G307801 Sobic010G259500--Sobic003G307801 Sobic010G066700 Sobic010G066700 Sobic010G259500--Sobic010G066700 Sobic010G259500--Sobic010G088700 Sobic005G051500 Sobic005G051500 Sobic010G259500--Sobic005G051500 Sobic003G319700 Sobic003G319700 Sobic005G005600--Sobic003G319700 Sobic001G449600 Sobic001G449600 Sobic005G005600--Sobic001G449600 Sobic006G143400 Sobic006G143400 Sobic005G005600--Sobic006G143400 Sobic005G005600--Sobic009G217700 Sobic005G005600--Sobic005G213500 Sobic007G166000 Sobic007G166000 Sobic005G005600--Sobic007G166000 Sobic005G005600--Sobic003G364000 Sobic001G433900 Sobic001G433900 Sobic005G005600--Sobic001G433900 Sobic009G139700 Sobic009G139700 Sobic005G005600--Sobic009G139700
Octagon: transcription factors


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