Gene annotation
Transcriptome id Sobic.005G005600.2
Synonym PRA1.B2, Sb05g000650
Functional annotation prenylated rab acceptor, putative, expressed
UniProt A0A1Z5RG15
Pfam PF03208
Panther DB PTHR19317 PTHR19317:SF9
NCBI CDD KOG3142; Prenylated rab acceptor 1
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G38360 : prenylated RAB acceptor 1.B4
RAP-DB (Rice) LOC_Os11g01610.1 : prenylated rab acceptor, putative, expressed
MaizeGDB (Corn) Zm00025a033283
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G319700 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
2 Sobic.001G449600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@non-symbiotic hemoglobin 2, putative, expressed -
3 Sobic.006G143400 expressed protein -
4 Sobic.009G217700 - -
5 Sobic.005G213500 leucoanthocyanidin dioxygenase, putative, expressed -
6 Sobic.007G166000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS8-14 - C2H2 zinc finger protein, expressed -
7 Sobic.003G364000 glycosyl hydrolase, putative, expressed K01183: chitinase
8 Sobic.001G433900 PLA IIIA/PLP7, putative, expressed -
9 Sobic.009G139700 - -
10 Sobic.006G132900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
11 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
12 Sobic.003G041600 DUF623 domain containing protein, expressed -
13 Sobic.010G088700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
14 Sobic.010G156500 expressed protein -
15 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
16 Sobic.001G091600 expressed protein -
17 Sobic.005G013600 WRKY46, expressed -
18 Sobic.008G185400 ras-related protein, putative, expressed K07889: Ras-related protein Rab-5C
19 Sobic.005G213600 Deletion of the Low Germination Stimulant 1 (LGS1) gene gives a Striga‐resistance trait in sorghum. Strigolactone precursor 18-hydroxycarlactonoic acid (18-OH-CLA) is a substrate for LGS1.(PubMedID : 34525227)@sulfotransferase domain containing protein, expressed -
20 Sobic.003G155600 exo70 exocyst complex subunit family protein, putative, expressed -


Gene co-expression network
sample Sobic005G005600 Sobic005G005600 Sobic003G319700 Sobic003G319700 Sobic005G005600--Sobic003G319700 Sobic001G449600 Sobic001G449600 Sobic005G005600--Sobic001G449600 Sobic006G143400 Sobic006G143400 Sobic005G005600--Sobic006G143400 Sobic009G217700 Sobic009G217700 Sobic005G005600--Sobic009G217700 Sobic005G213500 Sobic005G213500 Sobic005G005600--Sobic005G213500 Sobic007G166000 Sobic007G166000 Sobic005G005600--Sobic007G166000 Sobic003G364000 Sobic003G364000 Sobic005G005600--Sobic003G364000 Sobic001G433900 Sobic001G433900 Sobic005G005600--Sobic001G433900 Sobic009G139700 Sobic009G139700 Sobic005G005600--Sobic009G139700 Sobic003G319700--Sobic009G217700 Sobic003G319700--Sobic005G005600 Sobic003G319700--Sobic001G449600 Sobic003G319700--Sobic001G433900 Sobic003G319700--Sobic003G364000 Sobic010G088700 Sobic010G088700 Sobic003G319700--Sobic010G088700 Sobic002G034800 Sobic002G034800 Sobic003G319700--Sobic002G034800 Sobic007G057000 Sobic007G057000 Sobic003G319700--Sobic007G057000 Sobic002G057900 Sobic002G057900 Sobic003G319700--Sobic002G057900 Sobic001G449600--Sobic009G217700 Sobic003G255200 Sobic003G255200 Sobic001G449600--Sobic003G255200 Sobic001G449600--Sobic005G005600 Sobic001G449600--Sobic003G319700 Sobic001G449600--Sobic007G166000 Sobic002G125700 Sobic002G125700 Sobic001G449600--Sobic002G125700 Sobic001G449600--Sobic002G034800 Sobic003G255500 Sobic003G255500 Sobic001G449600--Sobic003G255500 Sobic009G016300 Sobic009G016300 Sobic001G449600--Sobic009G016300 Sobic006G143400--Sobic005G005600 Sobic003G041600 Sobic003G041600 Sobic006G143400--Sobic003G041600 Sobic009G159400 Sobic009G159400 Sobic006G143400--Sobic009G159400 Sobic010G259600 Sobic010G259600 Sobic006G143400--Sobic010G259600 Sobic008G185400 Sobic008G185400 Sobic006G143400--Sobic008G185400 Sobic004G075000 Sobic004G075000 Sobic006G143400--Sobic004G075000 Sobic003G364300 Sobic003G364300 Sobic006G143400--Sobic003G364300 Sobic006G143400--Sobic007G166000 Sobic006G143400--Sobic001G449600 Sobic009G217700--Sobic001G449600 Sobic009G217700--Sobic003G364000 Sobic009G217700--Sobic003G319700 Sobic009G217700--Sobic003G255200 Sobic009G217700--Sobic009G139700 Sobic004G107700 Sobic004G107700 Sobic009G217700--Sobic004G107700 Sobic009G217700--Sobic005G005600 Sobic009G217700--Sobic002G034800 Sobic005G013600 Sobic005G013600 Sobic009G217700--Sobic005G013600 Sobic010G156500 Sobic010G156500 Sobic005G213500--Sobic010G156500 Sobic005G213500--Sobic003G364000 Sobic005G213600 Sobic005G213600 Sobic005G213500--Sobic005G213600 Sobic005G213500--Sobic003G364300 Sobic006G132900 Sobic006G132900 Sobic005G213500--Sobic006G132900 Sobic002G338500 Sobic002G338500 Sobic005G213500--Sobic002G338500 Sobic010G043900 Sobic010G043900 Sobic005G213500--Sobic010G043900 Sobic010G259500 Sobic010G259500 Sobic005G213500--Sobic010G259500 Sobic005G213500--Sobic005G005600 Sobic007G166000--Sobic001G449600 Sobic009G164600 Sobic009G164600 Sobic007G166000--Sobic009G164600 Sobic007G166000--Sobic005G005600 Sobic007G166000--Sobic009G139700 Sobic007G166000--Sobic010G259600 Sobic007G166000--Sobic006G143400 Sobic007G166000--Sobic009G217700 Sobic009G231000 Sobic009G231000 Sobic007G166000--Sobic009G231000 Sobic007G005700 Sobic007G005700 Sobic007G166000--Sobic007G005700 Sobic003G364000--Sobic010G088700 Sobic003G364000--Sobic009G217700 Sobic003G364000--Sobic010G156500 Sobic003G364000--Sobic003G364300 Sobic003G280200 Sobic003G280200 Sobic003G364000--Sobic003G280200 Sobic003G364000--Sobic010G259500 Sobic003G364000--Sobic005G213500 Sobic003G364000--Sobic002G034800 Sobic003G382600 Sobic003G382600 Sobic003G364000--Sobic003G382600 Sobic001G433900--Sobic006G132900 Sobic001G433900--Sobic010G259500 Sobic010G066700 Sobic010G066700 Sobic001G433900--Sobic010G066700 Sobic001G433900--Sobic003G319700 Sobic001G433900--Sobic010G088700 Sobic001G433900--Sobic002G034800 Sobic001G433900--Sobic001G449600 Sobic001G433900--Sobic003G364000 Sobic003G301600 Sobic003G301600 Sobic001G433900--Sobic003G301600 Sobic009G139700--Sobic009G217700 Sobic009G139700--Sobic003G364000 Sobic009G139700--Sobic005G013600 Sobic005G203100 Sobic005G203100 Sobic009G139700--Sobic005G203100 Sobic009G139700--Sobic001G449600 Sobic009G139700--Sobic007G166000 Sobic009G139700--Sobic007G005700 Sobic010G113600 Sobic010G113600 Sobic009G139700--Sobic010G113600 Sobic003G088500 Sobic003G088500 Sobic009G139700--Sobic003G088500
Octagon: transcription factors


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