Gene annotation
Transcriptome id Sobic.007G166000.1
Synonym Sb07g023890,Sensitive to proton rhizotoxicity 1, SbSTOP1c
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
regulation of Al tolerance genes and proton tolerance genes (PubMedID : 29541086)
ZOS8-14 - C2H2 zinc finger protein, expressed
UniProt A0A1Z5RAC4
Pfam -
Panther DB PTHR10593 PTHR10593:SF41
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G22890 : C2H2 and C2HC zinc fingers superfamily protein
RAP-DB (Rice) LOC_Os08g44830.1 : ZOS8-14 - C2H2 zinc finger protein, expressed
MaizeGDB (Corn) Zm00025a005560
Brachypodium KQJ94673 , PNT66462 , KQK12241
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G449600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@non-symbiotic hemoglobin 2, putative, expressed -
2 Sobic.009G164600 ZOS1-14 - C2H2 zinc finger protein, expressed -
3 Sobic.005G005600 prenylated rab acceptor, putative, expressed -
4 Sobic.009G139700 - -
5 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
6 Sobic.006G143400 expressed protein -
7 Sobic.009G217700 - -
8 Sobic.009G231000 - -
9 Sobic.007G005700 expressed protein -
10 Sobic.003G345100 flavonol synthase/flavanone 3-hydroxylase, putative, expressed -
11 Sobic.006G132900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@expressed protein -
12 Sobic.003G352300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
13 Sobic.005G013600 WRKY46, expressed -
14 Sobic.002G125700 similar to Aquaporin PIP2-6(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09872: aquaporin PIP
15 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
16 Sobic.003G041600 DUF623 domain containing protein, expressed -
17 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
18 Sobic.004G304625 - K15095: (+)-neomenthol dehydrogenase
19 Sobic.001G279500 VQ domain containing protein, putative, expressed -
20 Sobic.009G159400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@universal stress protein domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic007G166000 Sobic007G166000 Sobic001G449600 Sobic001G449600 Sobic007G166000--Sobic001G449600 Sobic009G164600 Sobic009G164600 Sobic007G166000--Sobic009G164600 Sobic005G005600 Sobic005G005600 Sobic007G166000--Sobic005G005600 Sobic009G139700 Sobic009G139700 Sobic007G166000--Sobic009G139700 Sobic010G259600 Sobic010G259600 Sobic007G166000--Sobic010G259600 Sobic006G143400 Sobic006G143400 Sobic007G166000--Sobic006G143400 Sobic009G217700 Sobic009G217700 Sobic007G166000--Sobic009G217700 Sobic009G231000 Sobic009G231000 Sobic007G166000--Sobic009G231000 Sobic007G005700 Sobic007G005700 Sobic007G166000--Sobic007G005700 Sobic001G449600--Sobic009G217700 Sobic003G255200 Sobic003G255200 Sobic001G449600--Sobic003G255200 Sobic001G449600--Sobic005G005600 Sobic003G319700 Sobic003G319700 Sobic001G449600--Sobic003G319700 Sobic001G449600--Sobic007G166000 Sobic002G125700 Sobic002G125700 Sobic001G449600--Sobic002G125700 Sobic002G034800 Sobic002G034800 Sobic001G449600--Sobic002G034800 Sobic003G255500 Sobic003G255500 Sobic001G449600--Sobic003G255500 Sobic009G016300 Sobic009G016300 Sobic001G449600--Sobic009G016300 Sobic003G345100 Sobic003G345100 Sobic009G164600--Sobic003G345100 Sobic008G050600 Sobic008G050600 Sobic009G164600--Sobic008G050600 Sobic005G051200 Sobic005G051200 Sobic009G164600--Sobic005G051200 Sobic004G208700 Sobic004G208700 Sobic009G164600--Sobic004G208700 Sobic003G286600 Sobic003G286600 Sobic009G164600--Sobic003G286600 Sobic005G063100 Sobic005G063100 Sobic009G164600--Sobic005G063100 Sobic001G140900 Sobic001G140900 Sobic009G164600--Sobic001G140900 Sobic009G234100 Sobic009G234100 Sobic009G164600--Sobic009G234100 Sobic001G435000 Sobic001G435000 Sobic009G164600--Sobic001G435000 Sobic005G005600--Sobic003G319700 Sobic005G005600--Sobic001G449600 Sobic005G005600--Sobic006G143400 Sobic005G005600--Sobic009G217700 Sobic005G213500 Sobic005G213500 Sobic005G005600--Sobic005G213500 Sobic005G005600--Sobic007G166000 Sobic003G364000 Sobic003G364000 Sobic005G005600--Sobic003G364000 Sobic001G433900 Sobic001G433900 Sobic005G005600--Sobic001G433900 Sobic005G005600--Sobic009G139700 Sobic009G139700--Sobic009G217700 Sobic009G139700--Sobic003G364000 Sobic005G013600 Sobic005G013600 Sobic009G139700--Sobic005G013600 Sobic005G203100 Sobic005G203100 Sobic009G139700--Sobic005G203100 Sobic009G139700--Sobic001G449600 Sobic009G139700--Sobic007G166000 Sobic009G139700--Sobic007G005700 Sobic010G113600 Sobic010G113600 Sobic009G139700--Sobic010G113600 Sobic003G088500 Sobic003G088500 Sobic009G139700--Sobic003G088500 Sobic009G159400 Sobic009G159400 Sobic010G259600--Sobic009G159400 Sobic003G352300 Sobic003G352300 Sobic010G259600--Sobic003G352300 Sobic010G259600--Sobic009G234100 Sobic010G259600--Sobic002G125700 Sobic007G087200 Sobic007G087200 Sobic010G259600--Sobic007G087200 Sobic010G259600--Sobic009G231000 Sobic010G259600--Sobic001G435000 Sobic010G259600--Sobic003G255200 Sobic002G017800 Sobic002G017800 Sobic010G259600--Sobic002G017800 Sobic006G143400--Sobic005G005600 Sobic003G041600 Sobic003G041600 Sobic006G143400--Sobic003G041600 Sobic006G143400--Sobic009G159400 Sobic006G143400--Sobic010G259600 Sobic008G185400 Sobic008G185400 Sobic006G143400--Sobic008G185400 Sobic004G075000 Sobic004G075000 Sobic006G143400--Sobic004G075000 Sobic003G364300 Sobic003G364300 Sobic006G143400--Sobic003G364300 Sobic006G143400--Sobic007G166000 Sobic006G143400--Sobic001G449600 Sobic009G217700--Sobic001G449600 Sobic009G217700--Sobic003G364000 Sobic009G217700--Sobic003G319700 Sobic009G217700--Sobic003G255200 Sobic009G217700--Sobic009G139700 Sobic004G107700 Sobic004G107700 Sobic009G217700--Sobic004G107700 Sobic009G217700--Sobic005G005600 Sobic009G217700--Sobic002G034800 Sobic009G217700--Sobic005G013600 Sobic009G231000--Sobic003G364300 Sobic009G231000--Sobic010G259600 Sobic001G325400 Sobic001G325400 Sobic009G231000--Sobic001G325400 Sobic006G039100 Sobic006G039100 Sobic009G231000--Sobic006G039100 Sobic009G231000--Sobic002G125700 Sobic002G055700 Sobic002G055700 Sobic009G231000--Sobic002G055700 Sobic003G087300 Sobic003G087300 Sobic009G231000--Sobic003G087300 Sobic003G297600 Sobic003G297600 Sobic009G231000--Sobic003G297600 Sobic010G156500 Sobic010G156500 Sobic009G231000--Sobic010G156500 Sobic005G063300 Sobic005G063300 Sobic007G005700--Sobic005G063300 Sobic007G005700--Sobic009G139700 Sobic007G005700--Sobic002G125700 Sobic007G005700--Sobic001G449600 Sobic007G005700--Sobic009G217700 Sobic007G005700--Sobic003G255200 Sobic007G005700--Sobic007G166000 Sobic007G005700--Sobic005G013600 Sobic003G155600 Sobic003G155600 Sobic007G005700--Sobic003G155600
Octagon: transcription factors


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