Gene annotation
Transcriptome id Sobic.007G005700.1
Synonym Sb07g000690
Functional annotation expressed protein
UniProt C5YLH2
Pfam -
Panther DB PTHR34666 PTHR34666:SF1
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) LOC_Os08g01550.1 : expressed protein
MaizeGDB (Corn) Zm00025a040154
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G063300 Fatty acid reductase 4 FAR4 (At)(PubMedID : 27208977)@male sterility protein, putative, expressed K13356: alcohol-forming fatty acyl-CoA reductase
2 Sobic.009G139700 - -
3 Sobic.002G125700 similar to Aquaporin PIP2-6(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09872: aquaporin PIP
4 Sobic.001G449600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@non-symbiotic hemoglobin 2, putative, expressed -
5 Sobic.009G217700 - -
6 Sobic.003G255200 expressed protein -
7 Sobic.007G166000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS8-14 - C2H2 zinc finger protein, expressed -
8 Sobic.005G013600 WRKY46, expressed -
9 Sobic.003G155600 exo70 exocyst complex subunit family protein, putative, expressed -
10 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
11 Sobic.001G503100 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
12 Sobic.005G203100 tropinone reductase 2, putative, expressed K08081: tropinone reductase I
13 Sobic.009G229000 expressed protein -
14 Sobic.004G166700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@"Beta-fructofuranosidase, cell wall Invertase 2 (Os)"(PubMedID : 27208977)@glycosyl hydrolases, putative, expressed K01193: INV, beta-fructofuranosidase
15 Sobic.003G087300 nuclease PA3, putative, expressed -
16 Sobic.003G352300 triosephosphate isomerase(PubMedID : 27016024)@triosephosphate isomerase, cytosolic, putative, expressed K01803: TPI, triosephosphate isomerase (TIM)
17 Sobic.006G199800 Orthologous gene to AtMYB58 and AtMYB63(PubMedID : 26712107)@MYB family transcription factor, putative, expressed K09422: transcription factor MYB, plant
18 Sobic.003G088500 multicopper oxidase domain containing protein, expressed -
19 Sobic.004G107700 expressed protein -
20 Sobic.003G271500 expressed protein -


Gene co-expression network
sample Sobic007G005700 Sobic007G005700 Sobic005G063300 Sobic005G063300 Sobic007G005700--Sobic005G063300 Sobic009G139700 Sobic009G139700 Sobic007G005700--Sobic009G139700 Sobic002G125700 Sobic002G125700 Sobic007G005700--Sobic002G125700 Sobic001G449600 Sobic001G449600 Sobic007G005700--Sobic001G449600 Sobic009G217700 Sobic009G217700 Sobic007G005700--Sobic009G217700 Sobic003G255200 Sobic003G255200 Sobic007G005700--Sobic003G255200 Sobic007G166000 Sobic007G166000 Sobic007G005700--Sobic007G166000 Sobic005G013600 Sobic005G013600 Sobic007G005700--Sobic005G013600 Sobic003G155600 Sobic003G155600 Sobic007G005700--Sobic003G155600 Sobic005G063300--Sobic007G005700 Sobic005G063300--Sobic003G155600 Sobic005G063300--Sobic003G255200 Sobic010G015300 Sobic010G015300 Sobic005G063300--Sobic010G015300 Sobic008G144600 Sobic008G144600 Sobic005G063300--Sobic008G144600 Sobic001G039200 Sobic001G039200 Sobic005G063300--Sobic001G039200 Sobic001G082600 Sobic001G082600 Sobic005G063300--Sobic001G082600 Sobic010G092200 Sobic010G092200 Sobic005G063300--Sobic010G092200 Sobic004G245600 Sobic004G245600 Sobic005G063300--Sobic004G245600 Sobic009G139700--Sobic009G217700 Sobic003G364000 Sobic003G364000 Sobic009G139700--Sobic003G364000 Sobic009G139700--Sobic005G013600 Sobic005G203100 Sobic005G203100 Sobic009G139700--Sobic005G203100 Sobic009G139700--Sobic001G449600 Sobic009G139700--Sobic007G166000 Sobic009G139700--Sobic007G005700 Sobic010G113600 Sobic010G113600 Sobic009G139700--Sobic010G113600 Sobic003G088500 Sobic003G088500 Sobic009G139700--Sobic003G088500 Sobic002G125700--Sobic003G255200 Sobic001G503100 Sobic001G503100 Sobic002G125700--Sobic001G503100 Sobic003G352300 Sobic003G352300 Sobic002G125700--Sobic003G352300 Sobic010G259600 Sobic010G259600 Sobic002G125700--Sobic010G259600 Sobic001G325400 Sobic001G325400 Sobic002G125700--Sobic001G325400 Sobic007G087200 Sobic007G087200 Sobic002G125700--Sobic007G087200 Sobic004G107700 Sobic004G107700 Sobic002G125700--Sobic004G107700 Sobic009G231000 Sobic009G231000 Sobic002G125700--Sobic009G231000 Sobic010G063000 Sobic010G063000 Sobic002G125700--Sobic010G063000 Sobic001G449600--Sobic009G217700 Sobic001G449600--Sobic003G255200 Sobic005G005600 Sobic005G005600 Sobic001G449600--Sobic005G005600 Sobic003G319700 Sobic003G319700 Sobic001G449600--Sobic003G319700 Sobic001G449600--Sobic007G166000 Sobic001G449600--Sobic002G125700 Sobic002G034800 Sobic002G034800 Sobic001G449600--Sobic002G034800 Sobic003G255500 Sobic003G255500 Sobic001G449600--Sobic003G255500 Sobic009G016300 Sobic009G016300 Sobic001G449600--Sobic009G016300 Sobic009G217700--Sobic001G449600 Sobic009G217700--Sobic003G364000 Sobic009G217700--Sobic003G319700 Sobic009G217700--Sobic003G255200 Sobic009G217700--Sobic009G139700 Sobic009G217700--Sobic004G107700 Sobic009G217700--Sobic005G005600 Sobic009G217700--Sobic002G034800 Sobic009G217700--Sobic005G013600 Sobic003G255200--Sobic004G107700 Sobic003G255200--Sobic002G125700 Sobic008G172600 Sobic008G172600 Sobic003G255200--Sobic008G172600 Sobic004G046200 Sobic004G046200 Sobic003G255200--Sobic004G046200 Sobic003G255200--Sobic010G259600 Sobic003G255200--Sobic001G449600 Sobic003G255200--Sobic007G087200 Sobic003G255200--Sobic001G503100 Sobic003G255200--Sobic002G034800 Sobic007G166000--Sobic001G449600 Sobic009G164600 Sobic009G164600 Sobic007G166000--Sobic009G164600 Sobic007G166000--Sobic005G005600 Sobic007G166000--Sobic009G139700 Sobic007G166000--Sobic010G259600 Sobic006G143400 Sobic006G143400 Sobic007G166000--Sobic006G143400 Sobic007G166000--Sobic009G217700 Sobic007G166000--Sobic009G231000 Sobic007G166000--Sobic007G005700 Sobic005G013600--Sobic009G217700 Sobic005G013600--Sobic001G449600 Sobic005G013600--Sobic009G139700 Sobic005G013600--Sobic007G005700 Sobic005G013600--Sobic003G255200 Sobic005G013600--Sobic007G166000 Sobic005G013600--Sobic003G364000 Sobic005G013600--Sobic005G005600 Sobic003G202000 Sobic003G202000 Sobic005G013600--Sobic003G202000 Sobic003G155600--Sobic007G005700 Sobic003G155600--Sobic006G143400 Sobic003G271500 Sobic003G271500 Sobic003G155600--Sobic003G271500 Sobic003G155600--Sobic005G063300 Sobic003G155600--Sobic001G449600 Sobic003G155600--Sobic009G217700 Sobic003G155600--Sobic005G005600 Sobic001G054500 Sobic001G054500 Sobic003G155600--Sobic001G054500 Sobic003G364300 Sobic003G364300 Sobic003G155600--Sobic003G364300
Octagon: transcription factors


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