Gene annotation
Transcriptome id Sobic.009G217700.1
Synonym
Functional annotation -
UniProt A0A1B6P9N8
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G449600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@Oxygen binding /transporter (Zm)(PubMedID : 27208977)@non-symbiotic hemoglobin 2, putative, expressed -
2 Sobic.003G364000 glycosyl hydrolase, putative, expressed K01183: chitinase
3 Sobic.003G319700 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
4 Sobic.003G255200 expressed protein -
5 Sobic.009G139700 - -
6 Sobic.004G107700 expressed protein -
7 Sobic.005G005600 prenylated rab acceptor, putative, expressed -
8 Sobic.002G034800 - -
9 Sobic.005G013600 WRKY46, expressed -
10 Sobic.010G088700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phosphate-induced protein 1 conserved region domain containing protein, expressed -
11 Sobic.010G156500 expressed protein -
12 Sobic.010G066700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein anthranilate N-benzoyltransferase protein 1 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
13 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
14 Sobic.010G113600 vignain precursor, putative, expressed -
15 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
16 Sobic.007G057000 expressed protein -
17 Sobic.003G271500 expressed protein -
18 Sobic.002G125700 similar to Aquaporin PIP2-6(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09872: aquaporin PIP
19 Sobic.001G503100 "domain confirmed by Pfam database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@DUF260 domain containing protein, putative, expressed -
20 Sobic.007G166000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@regulation of Al tolerance genes and proton tolerance genes(PubMedID : 29541086)@ZOS8-14 - C2H2 zinc finger protein, expressed -


Gene co-expression network
sample Sobic009G217700 Sobic009G217700 Sobic001G449600 Sobic001G449600 Sobic009G217700--Sobic001G449600 Sobic003G364000 Sobic003G364000 Sobic009G217700--Sobic003G364000 Sobic003G319700 Sobic003G319700 Sobic009G217700--Sobic003G319700 Sobic003G255200 Sobic003G255200 Sobic009G217700--Sobic003G255200 Sobic009G139700 Sobic009G139700 Sobic009G217700--Sobic009G139700 Sobic004G107700 Sobic004G107700 Sobic009G217700--Sobic004G107700 Sobic005G005600 Sobic005G005600 Sobic009G217700--Sobic005G005600 Sobic002G034800 Sobic002G034800 Sobic009G217700--Sobic002G034800 Sobic005G013600 Sobic005G013600 Sobic009G217700--Sobic005G013600 Sobic001G449600--Sobic009G217700 Sobic001G449600--Sobic003G255200 Sobic001G449600--Sobic005G005600 Sobic001G449600--Sobic003G319700 Sobic007G166000 Sobic007G166000 Sobic001G449600--Sobic007G166000 Sobic002G125700 Sobic002G125700 Sobic001G449600--Sobic002G125700 Sobic001G449600--Sobic002G034800 Sobic003G255500 Sobic003G255500 Sobic001G449600--Sobic003G255500 Sobic009G016300 Sobic009G016300 Sobic001G449600--Sobic009G016300 Sobic010G088700 Sobic010G088700 Sobic003G364000--Sobic010G088700 Sobic003G364000--Sobic009G217700 Sobic010G156500 Sobic010G156500 Sobic003G364000--Sobic010G156500 Sobic003G364300 Sobic003G364300 Sobic003G364000--Sobic003G364300 Sobic003G280200 Sobic003G280200 Sobic003G364000--Sobic003G280200 Sobic010G259500 Sobic010G259500 Sobic003G364000--Sobic010G259500 Sobic005G213500 Sobic005G213500 Sobic003G364000--Sobic005G213500 Sobic003G364000--Sobic002G034800 Sobic003G382600 Sobic003G382600 Sobic003G364000--Sobic003G382600 Sobic003G319700--Sobic009G217700 Sobic003G319700--Sobic005G005600 Sobic003G319700--Sobic001G449600 Sobic001G433900 Sobic001G433900 Sobic003G319700--Sobic001G433900 Sobic003G319700--Sobic003G364000 Sobic003G319700--Sobic010G088700 Sobic003G319700--Sobic002G034800 Sobic007G057000 Sobic007G057000 Sobic003G319700--Sobic007G057000 Sobic002G057900 Sobic002G057900 Sobic003G319700--Sobic002G057900 Sobic003G255200--Sobic004G107700 Sobic003G255200--Sobic002G125700 Sobic008G172600 Sobic008G172600 Sobic003G255200--Sobic008G172600 Sobic004G046200 Sobic004G046200 Sobic003G255200--Sobic004G046200 Sobic010G259600 Sobic010G259600 Sobic003G255200--Sobic010G259600 Sobic003G255200--Sobic001G449600 Sobic007G087200 Sobic007G087200 Sobic003G255200--Sobic007G087200 Sobic001G503100 Sobic001G503100 Sobic003G255200--Sobic001G503100 Sobic003G255200--Sobic002G034800 Sobic009G139700--Sobic009G217700 Sobic009G139700--Sobic003G364000 Sobic009G139700--Sobic005G013600 Sobic005G203100 Sobic005G203100 Sobic009G139700--Sobic005G203100 Sobic009G139700--Sobic001G449600 Sobic009G139700--Sobic007G166000 Sobic007G005700 Sobic007G005700 Sobic009G139700--Sobic007G005700 Sobic010G113600 Sobic010G113600 Sobic009G139700--Sobic010G113600 Sobic003G088500 Sobic003G088500 Sobic009G139700--Sobic003G088500 Sobic004G107700--Sobic003G255200 Sobic003G437200 Sobic003G437200 Sobic004G107700--Sobic003G437200 Sobic004G107700--Sobic002G125700 Sobic003G417800 Sobic003G417800 Sobic004G107700--Sobic003G417800 Sobic004G107700--Sobic001G503100 Sobic004G107700--Sobic002G034800 Sobic009G139400 Sobic009G139400 Sobic004G107700--Sobic009G139400 Sobic003G352300 Sobic003G352300 Sobic004G107700--Sobic003G352300 Sobic004G176600 Sobic004G176600 Sobic004G107700--Sobic004G176600 Sobic005G005600--Sobic003G319700 Sobic005G005600--Sobic001G449600 Sobic006G143400 Sobic006G143400 Sobic005G005600--Sobic006G143400 Sobic005G005600--Sobic009G217700 Sobic005G005600--Sobic005G213500 Sobic005G005600--Sobic007G166000 Sobic005G005600--Sobic003G364000 Sobic005G005600--Sobic001G433900 Sobic005G005600--Sobic009G139700 Sobic010G066700 Sobic010G066700 Sobic002G034800--Sobic010G066700 Sobic002G034800--Sobic009G139400 Sobic002G034800--Sobic004G107700 Sobic002G034800--Sobic003G280200 Sobic009G077800 Sobic009G077800 Sobic002G034800--Sobic009G077800 Sobic002G034800--Sobic003G255200 Sobic001G119400 Sobic001G119400 Sobic002G034800--Sobic001G119400 Sobic009G183400 Sobic009G183400 Sobic002G034800--Sobic009G183400 Sobic002G034800--Sobic010G259600 Sobic005G013600--Sobic009G217700 Sobic005G013600--Sobic001G449600 Sobic005G013600--Sobic009G139700 Sobic005G013600--Sobic007G005700 Sobic005G013600--Sobic003G255200 Sobic005G013600--Sobic007G166000 Sobic005G013600--Sobic003G364000 Sobic005G013600--Sobic005G005600 Sobic003G202000 Sobic003G202000 Sobic005G013600--Sobic003G202000
Octagon: transcription factors


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