Gene annotation
Transcriptome id Sobic.010G088700.1
Synonym EXO, Sb10g007690
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
phosphate-induced protein 1 conserved region domain containing protein, expressed
UniProt C5Z6Y0
Pfam PF04674
Panther DB PTHR31279 PTHR31279:SF15
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G08950 : Phosphate-responsive 1 family protein
RAP-DB (Rice) LOC_Os02g52010.1 : phosphate-induced protein 1 conserved region domain containing protein, expressed
MaizeGDB (Corn) Zm00025a022160 , Zm00025a042564 , Zm00025a033147 , Zm00025a022159 , Zm00025a022158 , Zm00025a049504
Brachypodium KQK18938 , KQK01825
Barley HORVU6Hr1G077770.1 , HORVU6Hr1G077770.2 , HORVU6Hr1G077780.1 , HORVU7Hr1G036780.3 , HORVU7Hr1G036780.2 , HORVU7Hr1G036780.1 , HORVU7Hr1G036780.7 , HORVU7Hr1G036780.6 , HORVU7Hr1G036780.5 , HORVU7Hr1G036780.4 , HORVU6Hr1G077790.1 , HORVU6Hr1G077750.1
Wheat -
Populus -


JBrowse

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cDNA sequences
Sobic.010G088700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G364000 glycosyl hydrolase, putative, expressed K01183: chitinase
2 Sobic.010G259500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transferase family protein, putative, expressed -
3 Sobic.002G034800 - -
4 Sobic.009G217700 - -
5 Sobic.001G365100 lipase, putative, expressed -
6 Sobic.001G433900 PLA IIIA/PLP7, putative, expressed -
7 Sobic.003G319700 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
8 Sobic.010G066700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein anthranilate N-benzoyltransferase protein 1 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
9 Sobic.005G213500 leucoanthocyanidin dioxygenase, putative, expressed -
10 Sobic.003G382600 ARGOS, putative, expressed -
11 Sobic.010G156500 expressed protein -
12 Sobic.009G139400 expressed protein -
13 Sobic.003G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
14 Sobic.003G301600 heavy metal-associated domain containing protein, expressed -
15 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
16 Sobic.007G057000 expressed protein -
17 Sobic.009G153100 zinc finger, C3HC4 type domain containing protein, expressed K19040: E3 ubiquitin-protein ligase ATL10/75/76/77/78
18 Sobic.003G156200 cytochrome P450, putative, expressed -
19 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
20 Sobic.002G203700 hypothetical protein -


Gene co-expression network
sample Sobic010G088700 Sobic010G088700 Sobic003G364000 Sobic003G364000 Sobic010G088700--Sobic003G364000 Sobic010G259500 Sobic010G259500 Sobic010G088700--Sobic010G259500 Sobic002G034800 Sobic002G034800 Sobic010G088700--Sobic002G034800 Sobic009G217700 Sobic009G217700 Sobic010G088700--Sobic009G217700 Sobic001G365100 Sobic001G365100 Sobic010G088700--Sobic001G365100 Sobic001G433900 Sobic001G433900 Sobic010G088700--Sobic001G433900 Sobic003G319700 Sobic003G319700 Sobic010G088700--Sobic003G319700 Sobic010G066700 Sobic010G066700 Sobic010G088700--Sobic010G066700 Sobic005G213500 Sobic005G213500 Sobic010G088700--Sobic005G213500 Sobic003G364000--Sobic010G088700 Sobic003G364000--Sobic009G217700 Sobic010G156500 Sobic010G156500 Sobic003G364000--Sobic010G156500 Sobic003G364300 Sobic003G364300 Sobic003G364000--Sobic003G364300 Sobic003G280200 Sobic003G280200 Sobic003G364000--Sobic003G280200 Sobic003G364000--Sobic010G259500 Sobic003G364000--Sobic005G213500 Sobic003G364000--Sobic002G034800 Sobic003G382600 Sobic003G382600 Sobic003G364000--Sobic003G382600 Sobic010G259500--Sobic001G365100 Sobic001G402200 Sobic001G402200 Sobic010G259500--Sobic001G402200 Sobic007G039600 Sobic007G039600 Sobic010G259500--Sobic007G039600 Sobic010G259500--Sobic003G364000 Sobic007G155100 Sobic007G155100 Sobic010G259500--Sobic007G155100 Sobic003G307801 Sobic003G307801 Sobic010G259500--Sobic003G307801 Sobic010G259500--Sobic010G066700 Sobic010G259500--Sobic010G088700 Sobic005G051500 Sobic005G051500 Sobic010G259500--Sobic005G051500 Sobic002G034800--Sobic010G066700 Sobic009G139400 Sobic009G139400 Sobic002G034800--Sobic009G139400 Sobic004G107700 Sobic004G107700 Sobic002G034800--Sobic004G107700 Sobic002G034800--Sobic003G280200 Sobic009G077800 Sobic009G077800 Sobic002G034800--Sobic009G077800 Sobic003G255200 Sobic003G255200 Sobic002G034800--Sobic003G255200 Sobic001G119400 Sobic001G119400 Sobic002G034800--Sobic001G119400 Sobic009G183400 Sobic009G183400 Sobic002G034800--Sobic009G183400 Sobic010G259600 Sobic010G259600 Sobic002G034800--Sobic010G259600 Sobic001G449600 Sobic001G449600 Sobic009G217700--Sobic001G449600 Sobic009G217700--Sobic003G364000 Sobic009G217700--Sobic003G319700 Sobic009G217700--Sobic003G255200 Sobic009G139700 Sobic009G139700 Sobic009G217700--Sobic009G139700 Sobic009G217700--Sobic004G107700 Sobic005G005600 Sobic005G005600 Sobic009G217700--Sobic005G005600 Sobic009G217700--Sobic002G034800 Sobic005G013600 Sobic005G013600 Sobic009G217700--Sobic005G013600 Sobic001G365100--Sobic010G259500 Sobic001G365100--Sobic007G155100 Sobic004G229800 Sobic004G229800 Sobic001G365100--Sobic004G229800 Sobic001G365100--Sobic007G039600 Sobic006G084600 Sobic006G084600 Sobic001G365100--Sobic006G084600 Sobic007G057000 Sobic007G057000 Sobic001G365100--Sobic007G057000 Sobic003G317100 Sobic003G317100 Sobic001G365100--Sobic003G317100 Sobic003G437200 Sobic003G437200 Sobic001G365100--Sobic003G437200 Sobic001G365100--Sobic010G066700 Sobic006G132900 Sobic006G132900 Sobic001G433900--Sobic006G132900 Sobic001G433900--Sobic010G259500 Sobic001G433900--Sobic010G066700 Sobic001G433900--Sobic003G319700 Sobic001G433900--Sobic010G088700 Sobic001G433900--Sobic002G034800 Sobic001G433900--Sobic001G449600 Sobic001G433900--Sobic003G364000 Sobic003G301600 Sobic003G301600 Sobic001G433900--Sobic003G301600 Sobic003G319700--Sobic009G217700 Sobic003G319700--Sobic005G005600 Sobic003G319700--Sobic001G449600 Sobic003G319700--Sobic001G433900 Sobic003G319700--Sobic003G364000 Sobic003G319700--Sobic010G088700 Sobic003G319700--Sobic002G034800 Sobic003G319700--Sobic007G057000 Sobic002G057900 Sobic002G057900 Sobic003G319700--Sobic002G057900 Sobic010G066700--Sobic007G057000 Sobic010G066700--Sobic009G139400 Sobic010G066700--Sobic007G155100 Sobic010G136000 Sobic010G136000 Sobic010G066700--Sobic010G136000 Sobic010G066700--Sobic002G034800 Sobic010G066700--Sobic001G119400 Sobic010G066700--Sobic003G382600 Sobic007G155000 Sobic007G155000 Sobic010G066700--Sobic007G155000 Sobic001G038900 Sobic001G038900 Sobic010G066700--Sobic001G038900 Sobic005G213500--Sobic010G156500 Sobic005G213500--Sobic003G364000 Sobic005G213600 Sobic005G213600 Sobic005G213500--Sobic005G213600 Sobic005G213500--Sobic003G364300 Sobic005G213500--Sobic006G132900 Sobic002G338500 Sobic002G338500 Sobic005G213500--Sobic002G338500 Sobic010G043900 Sobic010G043900 Sobic005G213500--Sobic010G043900 Sobic005G213500--Sobic010G259500 Sobic005G213500--Sobic005G005600
Octagon: transcription factors


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