Gene annotation
Transcriptome id Sobic.002G353900.1
Synonym PMT5, Sb02g037570, Sugar transporter;Sugar transporter, ATPLT5, ATPMT5
Functional annotation "Belonging to the Sdw3 locus, Sbi_sdw3" (PubMedID : 20464438)
SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
transporter family protein, putative, expressed
UniProt C5XCG2
Pfam PF00083
Panther DB PTHR23500 PTHR23500:SF152
NCBI CDD KOG0254; Predicted transporter (major facilitator superfamily)
KEGG Orthology -
Gene Ontology GO:0016021; integral component of membrane


Orthologs (automatic annotation)
TAIR AT3G18830 : polyol/monosaccharide transporter 5
RAP-DB (Rice) LOC_Os07g39350.1 : transporter family protein, putative, expressed
MaizeGDB (Corn) Zm00025a048523 , Zm00025a048520 , Zm00025a048527 , Zm00025a003056 , Zm00025a015021 , Zm00025a015023 , Zm00025a048519
Brachypodium KQK15520 , KQK15521 , KQK15522 , KQK23114 , KQK23113
Barley HORVU2Hr1G036530.1 , HORVU2Hr1G036530.2 , HORVU7Hr1G031650.4 , HORVU7Hr1G031650.5 , HORVU7Hr1G031650.1 , HORVU7Hr1G031650.2 , HORVU7Hr1G031650.3 , HORVU2Hr1G036570.1 , HORVU2Hr1G036570.3 , HORVU2Hr1G036570.2 , HORVU2Hr1G036570.5 , HORVU2Hr1G036570.6 , HORVU2Hr1G036590.4 , HORVU2Hr1G036590.3 , HORVU2Hr1G036590.2 , HORVU2Hr1G036590.1
Wheat TraesCS1A02G426300 , TraesCS2A02G189000 , TraesCS5A02G440100 , TraesCS2A02G188700 , TraesCS5D02G447300 , TraesCS4B02G262800 , TraesCS4D02G262900 , TraesCS2A02G188600 , TraesCS5B02G443900 , TraesCS7D02G154700 , TraesCS2B02G218700 , TraesCS7B02G058500 , TraesCS4A02G042000 , TraesCS3B02G096700 , TraesCS7A02G154500 , TraesCS2D02G198700 , TraesCS1B02G460600 , TraesCS1B02G460600 , TraesCS2D02G199100 , TraesCS1D02G435800 , TraesCS2D02G198900 , TraesCS2B02G218400 , TraesCS2B02G218600 , TraesCS2B02G218300 , TraesCS2B02G218300 , TraesCS1B02G460700 , TraesCS2D02G198800 , TraesCS1B02G460700 , TraesCS2A02G188900 , TraesCS2A02G188900
Populus -


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cDNA sequences
Sobic.002G353900


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
2 Sobic.003G382600 ARGOS, putative, expressed -
3 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
4 Sobic.002G302500 -(PubMedID : 29147737)@serine/threonine-protein kinase receptor precursor, putative, expressed -
5 Sobic.002G192000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@AN1-like zinc finger domain containing protein, expressed -
6 Sobic.009G221400 B3 DNA binding domain containing protein, expressed K09287: RAV-like factor
7 Sobic.009G139400 expressed protein -
8 Sobic.006G158600 short-chain dehydrogenase/reductase, putative, expressed K15095: (+)-neomenthol dehydrogenase
9 Sobic.009G234100 WRKY49, expressed -
10 Sobic.002G336600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@nucleoside transporter, putative, expressed K15014: SLC29A1_2_3, solute carrier family 29 (equilibrative nucleoside transporter), member 1/2/3
11 Sobic.001G038900 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@DUF567 domain containing protein, putative, expressed -
12 Sobic.002G338500 sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
13 Sobic.009G077800 expressed protein -
14 Sobic.004G237800 glycosyl transferase 8 domain containing protein, putative, expressed -
15 Sobic.010G066700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein anthranilate N-benzoyltransferase protein 1 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
16 Sobic.004G189400 expressed protein -
17 Sobic.001G018300 cytochrome P450 71E1, putative, expressed -
18 Sobic.004G208700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@CHIT1 - Chitinase family protein precursor, expressed K01183: chitinase
19 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
20 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML


Gene co-expression network
sample Sobic002G353900 Sobic002G353900 Sobic002G055700 Sobic002G055700 Sobic002G353900--Sobic002G055700 Sobic003G382600 Sobic003G382600 Sobic002G353900--Sobic003G382600 Sobic001G367600 Sobic001G367600 Sobic002G353900--Sobic001G367600 Sobic002G302500 Sobic002G302500 Sobic002G353900--Sobic002G302500 Sobic002G192000 Sobic002G192000 Sobic002G353900--Sobic002G192000 Sobic009G221400 Sobic009G221400 Sobic002G353900--Sobic009G221400 Sobic009G139400 Sobic009G139400 Sobic002G353900--Sobic009G139400 Sobic006G158600 Sobic006G158600 Sobic002G353900--Sobic006G158600 Sobic009G234100 Sobic009G234100 Sobic002G353900--Sobic009G234100 Sobic003G303100 Sobic003G303100 Sobic002G055700--Sobic003G303100 Sobic002G055700--Sobic003G382600 Sobic004G237800 Sobic004G237800 Sobic002G055700--Sobic004G237800 Sobic003G426400 Sobic003G426400 Sobic002G055700--Sobic003G426400 Sobic002G055700--Sobic002G353900 Sobic004G148200 Sobic004G148200 Sobic002G055700--Sobic004G148200 Sobic004G189400 Sobic004G189400 Sobic002G055700--Sobic004G189400 Sobic002G338500 Sobic002G338500 Sobic002G055700--Sobic002G338500 Sobic002G055700--Sobic001G367600 Sobic003G382600--Sobic002G055700 Sobic003G382600--Sobic004G189400 Sobic003G382600--Sobic002G338500 Sobic003G382600--Sobic002G353900 Sobic003G382600--Sobic003G303100 Sobic003G382600--Sobic004G237800 Sobic005G091500 Sobic005G091500 Sobic003G382600--Sobic005G091500 Sobic008G050600 Sobic008G050600 Sobic003G382600--Sobic008G050600 Sobic003G043600 Sobic003G043600 Sobic003G382600--Sobic003G043600 Sobic001G367600--Sobic002G192000 Sobic001G140900 Sobic001G140900 Sobic001G367600--Sobic001G140900 Sobic001G038900 Sobic001G038900 Sobic001G367600--Sobic001G038900 Sobic001G231700 Sobic001G231700 Sobic001G367600--Sobic001G231700 Sobic002G017800 Sobic002G017800 Sobic001G367600--Sobic002G017800 Sobic004G100700 Sobic004G100700 Sobic001G367600--Sobic004G100700 Sobic006G103000 Sobic006G103000 Sobic001G367600--Sobic006G103000 Sobic001G367600--Sobic002G055700 Sobic001G367600--Sobic002G353900 Sobic002G302500--Sobic002G353900 Sobic002G302500--Sobic002G017800 Sobic009G077800 Sobic009G077800 Sobic002G302500--Sobic009G077800 Sobic002G302500--Sobic002G055700 Sobic001G318500 Sobic001G318500 Sobic002G302500--Sobic001G318500 Sobic002G302500--Sobic002G338500 Sobic010G156500 Sobic010G156500 Sobic002G302500--Sobic010G156500 Sobic003G364300 Sobic003G364300 Sobic002G302500--Sobic003G364300 Sobic002G004900 Sobic002G004900 Sobic002G302500--Sobic002G004900 Sobic001G018300 Sobic001G018300 Sobic002G192000--Sobic001G018300 Sobic002G192000--Sobic001G367600 Sobic001G231400 Sobic001G231400 Sobic002G192000--Sobic001G231400 Sobic004G243100 Sobic004G243100 Sobic002G192000--Sobic004G243100 Sobic002G192000--Sobic006G158600 Sobic001G318700 Sobic001G318700 Sobic002G192000--Sobic001G318700 Sobic002G192000--Sobic001G038900 Sobic002G140400 Sobic002G140400 Sobic002G192000--Sobic002G140400 Sobic001G423800 Sobic001G423800 Sobic002G192000--Sobic001G423800 Sobic009G221400--Sobic002G353900 Sobic003G041600 Sobic003G041600 Sobic009G221400--Sobic003G041600 Sobic009G221400--Sobic006G158600 Sobic008G044300 Sobic008G044300 Sobic009G221400--Sobic008G044300 Sobic002G336600 Sobic002G336600 Sobic009G221400--Sobic002G336600 Sobic001G477600 Sobic001G477600 Sobic009G221400--Sobic001G477600 Sobic004G208700 Sobic004G208700 Sobic009G221400--Sobic004G208700 Sobic009G070400 Sobic009G070400 Sobic009G221400--Sobic009G070400 Sobic009G221400--Sobic002G192000 Sobic009G139400--Sobic009G077800 Sobic003G297600 Sobic003G297600 Sobic009G139400--Sobic003G297600 Sobic001G119400 Sobic001G119400 Sobic009G139400--Sobic001G119400 Sobic001G177800 Sobic001G177800 Sobic009G139400--Sobic001G177800 Sobic007G184600 Sobic007G184600 Sobic009G139400--Sobic007G184600 Sobic010G066700 Sobic010G066700 Sobic009G139400--Sobic010G066700 Sobic009G139400--Sobic002G353900 Sobic009G139400--Sobic003G382600 Sobic005G029200 Sobic005G029200 Sobic009G139400--Sobic005G029200 Sobic008G136400 Sobic008G136400 Sobic006G158600--Sobic008G136400 Sobic006G158600--Sobic002G192000 Sobic006G158600--Sobic002G140400 Sobic002G333400 Sobic002G333400 Sobic006G158600--Sobic002G333400 Sobic006G056400 Sobic006G056400 Sobic006G158600--Sobic006G056400 Sobic006G158600--Sobic001G038900 Sobic006G158600--Sobic001G423800 Sobic006G158600--Sobic002G336600 Sobic006G158600--Sobic004G243100 Sobic009G234100--Sobic004G208700 Sobic005G063100 Sobic005G063100 Sobic009G234100--Sobic005G063100 Sobic003G345100 Sobic003G345100 Sobic009G234100--Sobic003G345100 Sobic003G286600 Sobic003G286600 Sobic009G234100--Sobic003G286600 Sobic001G435000 Sobic001G435000 Sobic009G234100--Sobic001G435000 Sobic009G234100--Sobic008G050600 Sobic005G099000 Sobic005G099000 Sobic009G234100--Sobic005G099000 Sobic007G155000 Sobic007G155000 Sobic009G234100--Sobic007G155000 Sobic010G259600 Sobic010G259600 Sobic009G234100--Sobic010G259600
Octagon: transcription factors


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