Gene annotation
Transcriptome id Sobic.002G302500.1
Synonym Sb02g033290, Serine/threonine kinase
Functional annotation - (PubMedID : 29147737)
serine/threonine-protein kinase receptor precursor, putative, expressed
UniProt C5X8J9
Pfam PF08276 PF00954 PF01453 PF00069
Panther DB PTHR27002 PTHR27002:SF39
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0006468; protein phosphorylation GO:0005524ATP binding GO:0004672protein kinase activity


Orthologs (automatic annotation)
TAIR AT2G19130 : S-locus lectin protein kinase family protein
RAP-DB (Rice) LOC_Os10g20160.1 : serine/threonine-protein kinase receptor precursor, putative, expressed
MaizeGDB (Corn) Zm00025a048024 , Zm00025a054001 , Zm00025a027259 , Zm00025a027260
Brachypodium KQK10083 , KQK14050 , KQK17310 , KQK17315 , KQK10097
Barley HORVU7Hr1G098950.8 , HORVU7Hr1G098950.1 , HORVU7Hr1G098950.7 , HORVU7Hr1G002170.1 , HORVU7Hr1G098960.12 , HORVU7Hr1G098960.11 , HORVU7Hr1G098960.3 , HORVU7Hr1G098960.2 , HORVU7Hr1G098960.5 , HORVU7Hr1G098960.4 , HORVU2Hr1G112090.18 , HORVU2Hr1G112090.13 , HORVU2Hr1G112090.12 , HORVU2Hr1G112090.11 , HORVU2Hr1G112090.17 , HORVU2Hr1G112090.15 , HORVU2Hr1G112090.14 , HORVU2Hr1G121080.8 , HORVU3Hr1G077170.7 , HORVU3Hr1G077170.6 , HORVU3Hr1G077170.2 , HORVU3Hr1G077170.8 , HORVU2Hr1G121080.6 , HORVU2Hr1G121080.7 , HORVU2Hr1G121080.4 , HORVU2Hr1G121080.5 , HORVU2Hr1G121080.2 , HORVU2Hr1G121080.3 , HORVU2Hr1G121080.1 , HORVU2Hr1G121080.18 , HORVU2Hr1G121080.19 , HORVU2Hr1G121080.14 , HORVU2Hr1G121080.15 , HORVU2Hr1G121080.16 , HORVU2Hr1G121080.17 , HORVU2Hr1G121080.10 , HORVU2Hr1G121080.11 , HORVU2Hr1G121080.12 , HORVU2Hr1G121080.13 , HORVU2Hr1G112090.9 , HORVU2Hr1G112090.8 , HORVU2Hr1G112090.3 , HORVU2Hr1G112090.2 , HORVU2Hr1G112090.1 , HORVU2Hr1G112090.7 , HORVU2Hr1G112090.6 , HORVU2Hr1G112090.5 , HORVU2Hr1G112090.4 , HORVU2Hr1G121080.9 , HORVU7Hr1G098950.10 , HORVU7Hr1G098950.14 , HORVU7Hr1G098950.15 , HORVU2Hr1G002830.4 , HORVU2Hr1G002830.3 , HORVU2Hr1G002830.2 , HORVU2Hr1G002830.1 , HORVU2Hr1G121080.21 , HORVU2Hr1G121080.20 , HORVU2Hr1G121080.23 , HORVU2Hr1G121080.22 , HORVU2Hr1G121080.25 , HORVU2Hr1G121080.24 , HORVU2Hr1G121080.26 , HORVU3Hr1G077170.19 , HORVU3Hr1G077170.18 , HORVU3Hr1G077170.17 , HORVU3Hr1G077170.16 , HORVU3Hr1G077170.15 , HORVU3Hr1G077170.14 , HORVU3Hr1G077170.13 , HORVU3Hr1G077170.12 , HORVU3Hr1G077170.10
Wheat TraesCS2B02G578200 , TraesCS2B02G578200 , TraesCS2B02G578200 , TraesCS2B02G578200 , TraesCS2A02G039000 , TraesCS2D02G505900 , TraesCS2B02G533400 , TraesCS2B02G533400 , TraesCS3B02G352300 , TraesCS2B02G554700 , TraesCS3A02G323500 , TraesCS3A02G323500 , TraesCS3A02G323500 , TraesCS3A02G323200 , TraesCS3A02G323200 , TraesCS7A02G126100 , TraesCS3D02G316700 , TraesCS3D02G316700 , TraesCS3D02G317000 , TraesCS2A02G505200 , TraesCS2B02G019900 , TraesCS3A02G323400 , TraesCS3A02G323400 , TraesCS3B02G352500 , TraesCS2A02G547500 , TraesCS2A02G547500
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
2 Sobic.002G017800 expressed protein -
3 Sobic.009G077800 expressed protein -
4 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
5 Sobic.001G318500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
6 Sobic.002G338500 sugar transporter 1(PubMedID : 26465154)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
7 Sobic.010G156500 expressed protein -
8 Sobic.003G364300 similar to Basic class III chitinase OsChib3b precursor(PubMedID : 29862293)@glycosyl hydrolase, putative, expressed K01183: chitinase
9 Sobic.002G004900 transporter family protein, putative, expressed -
10 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
11 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
12 Sobic.009G139400 expressed protein -
13 Sobic.004G340900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX70 - F-box domain containing protein, expressed -
14 Sobic.009G231000 - -
15 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
16 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
17 Sobic.002G366600 expressed protein -
18 Sobic.003G426400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
19 Sobic.004G225900 GEM, putative, expressed -
20 Sobic.003G382600 ARGOS, putative, expressed -


Gene co-expression network
sample Sobic002G302500 Sobic002G302500 Sobic002G353900 Sobic002G353900 Sobic002G302500--Sobic002G353900 Sobic002G017800 Sobic002G017800 Sobic002G302500--Sobic002G017800 Sobic009G077800 Sobic009G077800 Sobic002G302500--Sobic009G077800 Sobic002G055700 Sobic002G055700 Sobic002G302500--Sobic002G055700 Sobic001G318500 Sobic001G318500 Sobic002G302500--Sobic001G318500 Sobic002G338500 Sobic002G338500 Sobic002G302500--Sobic002G338500 Sobic010G156500 Sobic010G156500 Sobic002G302500--Sobic010G156500 Sobic003G364300 Sobic003G364300 Sobic002G302500--Sobic003G364300 Sobic002G004900 Sobic002G004900 Sobic002G302500--Sobic002G004900 Sobic002G353900--Sobic002G055700 Sobic003G382600 Sobic003G382600 Sobic002G353900--Sobic003G382600 Sobic001G367600 Sobic001G367600 Sobic002G353900--Sobic001G367600 Sobic002G353900--Sobic002G302500 Sobic002G192000 Sobic002G192000 Sobic002G353900--Sobic002G192000 Sobic009G221400 Sobic009G221400 Sobic002G353900--Sobic009G221400 Sobic009G139400 Sobic009G139400 Sobic002G353900--Sobic009G139400 Sobic006G158600 Sobic006G158600 Sobic002G353900--Sobic006G158600 Sobic009G234100 Sobic009G234100 Sobic002G353900--Sobic009G234100 Sobic002G017800--Sobic001G367600 Sobic009G111000 Sobic009G111000 Sobic002G017800--Sobic009G111000 Sobic002G017800--Sobic001G318500 Sobic005G018700 Sobic005G018700 Sobic002G017800--Sobic005G018700 Sobic002G017800--Sobic009G077800 Sobic002G017800--Sobic002G055700 Sobic001G325400 Sobic001G325400 Sobic002G017800--Sobic001G325400 Sobic006G103000 Sobic006G103000 Sobic002G017800--Sobic006G103000 Sobic001G500000 Sobic001G500000 Sobic002G017800--Sobic001G500000 Sobic003G297600 Sobic003G297600 Sobic009G077800--Sobic003G297600 Sobic009G077800--Sobic009G139400 Sobic003G393700 Sobic003G393700 Sobic009G077800--Sobic003G393700 Sobic001G070800 Sobic001G070800 Sobic009G077800--Sobic001G070800 Sobic009G077800--Sobic002G055700 Sobic009G077800--Sobic002G017800 Sobic005G029200 Sobic005G029200 Sobic009G077800--Sobic005G029200 Sobic009G077800--Sobic001G325400 Sobic007G087200 Sobic007G087200 Sobic009G077800--Sobic007G087200 Sobic003G303100 Sobic003G303100 Sobic002G055700--Sobic003G303100 Sobic002G055700--Sobic003G382600 Sobic004G237800 Sobic004G237800 Sobic002G055700--Sobic004G237800 Sobic003G426400 Sobic003G426400 Sobic002G055700--Sobic003G426400 Sobic002G055700--Sobic002G353900 Sobic004G148200 Sobic004G148200 Sobic002G055700--Sobic004G148200 Sobic004G189400 Sobic004G189400 Sobic002G055700--Sobic004G189400 Sobic002G055700--Sobic002G338500 Sobic002G055700--Sobic001G367600 Sobic001G318500--Sobic002G004900 Sobic001G318500--Sobic002G017800 Sobic001G318500--Sobic009G111000 Sobic001G318500--Sobic002G302500 Sobic001G318500--Sobic002G055700 Sobic004G203700 Sobic004G203700 Sobic001G318500--Sobic004G203700 Sobic001G318500--Sobic004G148200 Sobic001G318500--Sobic001G367600 Sobic008G027600 Sobic008G027600 Sobic001G318500--Sobic008G027600 Sobic003G043600 Sobic003G043600 Sobic002G338500--Sobic003G043600 Sobic002G338500--Sobic003G382600 Sobic002G338500--Sobic002G055700 Sobic002G338500--Sobic010G156500 Sobic002G338500--Sobic003G364300 Sobic009G145500 Sobic009G145500 Sobic002G338500--Sobic009G145500 Sobic009G145700 Sobic009G145700 Sobic002G338500--Sobic009G145700 Sobic002G338500--Sobic002G353900 Sobic005G196800 Sobic005G196800 Sobic002G338500--Sobic005G196800 Sobic010G156500--Sobic003G364300 Sobic010G156500--Sobic002G338500 Sobic003G364000 Sobic003G364000 Sobic010G156500--Sobic003G364000 Sobic010G156500--Sobic003G382600 Sobic005G213500 Sobic005G213500 Sobic010G156500--Sobic005G213500 Sobic001G279500 Sobic001G279500 Sobic010G156500--Sobic001G279500 Sobic010G156500--Sobic002G302500 Sobic003G280200 Sobic003G280200 Sobic010G156500--Sobic003G280200 Sobic009G231000 Sobic009G231000 Sobic010G156500--Sobic009G231000 Sobic003G364300--Sobic010G156500 Sobic003G364300--Sobic009G231000 Sobic003G364300--Sobic002G338500 Sobic003G364300--Sobic003G364000 Sobic007G008100 Sobic007G008100 Sobic003G364300--Sobic007G008100 Sobic002G042000 Sobic002G042000 Sobic003G364300--Sobic002G042000 Sobic003G364300--Sobic003G382600 Sobic001G054500 Sobic001G054500 Sobic003G364300--Sobic001G054500 Sobic003G364300--Sobic002G302500 Sobic002G004900--Sobic001G318500 Sobic008G172600 Sobic008G172600 Sobic002G004900--Sobic008G172600 Sobic002G004900--Sobic002G017800 Sobic002G004900--Sobic003G280200 Sobic001G503100 Sobic001G503100 Sobic002G004900--Sobic001G503100 Sobic002G004900--Sobic002G302500 Sobic009G009600 Sobic009G009600 Sobic002G004900--Sobic009G009600 Sobic002G004900--Sobic001G325400 Sobic005G011200 Sobic005G011200 Sobic002G004900--Sobic005G011200
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.