Gene annotation
Transcriptome id Sobic.009G077800.1
Synonym Sb09g006520
Functional annotation expressed protein
UniProt C5YUN8
Pfam -
Panther DB PTHR33834
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G31090 : -
RAP-DB (Rice) LOC_Os05g11900.1 : expressed protein
MaizeGDB (Corn) -
Brachypodium KQK03297
Barley -
Wheat TraesCS3A02G140700 , TraesCS3B02G163900 , TraesCS3D02G146400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
2 Sobic.009G139400 expressed protein -
3 Sobic.003G393700 zinc finger, RING-type, putative, expressed -
4 Sobic.001G070800 expressed protein -
5 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
6 Sobic.002G017800 expressed protein -
7 Sobic.005G029200 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@calmodulin-like protein 1, putative, expressed K13448: calcium-binding protein CML
8 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
9 Sobic.007G087200 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
10 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
11 Sobic.002G353900 "Belonging to the Sdw3 locus, Sbi_sdw3"(PubMedID : 20464438)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@transporter family protein, putative, expressed -
12 Sobic.003G280200 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@expressed protein -
13 Sobic.009G234100 WRKY49, expressed -
14 Sobic.002G302500 -(PubMedID : 29147737)@serine/threonine-protein kinase receptor precursor, putative, expressed -
15 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
16 Sobic.004G340900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX70 - F-box domain containing protein, expressed -
17 Sobic.004G189400 expressed protein -
18 Sobic.002G366600 expressed protein -
19 Sobic.002G034800 - -
20 Sobic.007G184600 60S ribosomal protein L38, putative, expressed K02923: RP-L38e, large subunit ribosomal protein L38e


Gene co-expression network
sample Sobic009G077800 Sobic009G077800 Sobic003G297600 Sobic003G297600 Sobic009G077800--Sobic003G297600 Sobic009G139400 Sobic009G139400 Sobic009G077800--Sobic009G139400 Sobic003G393700 Sobic003G393700 Sobic009G077800--Sobic003G393700 Sobic001G070800 Sobic001G070800 Sobic009G077800--Sobic001G070800 Sobic002G055700 Sobic002G055700 Sobic009G077800--Sobic002G055700 Sobic002G017800 Sobic002G017800 Sobic009G077800--Sobic002G017800 Sobic005G029200 Sobic005G029200 Sobic009G077800--Sobic005G029200 Sobic001G325400 Sobic001G325400 Sobic009G077800--Sobic001G325400 Sobic007G087200 Sobic007G087200 Sobic009G077800--Sobic007G087200 Sobic003G297600--Sobic009G077800 Sobic003G297600--Sobic009G139400 Sobic003G297600--Sobic001G070800 Sobic003G297600--Sobic005G029200 Sobic004G189400 Sobic004G189400 Sobic003G297600--Sobic004G189400 Sobic008G050600 Sobic008G050600 Sobic003G297600--Sobic008G050600 Sobic001G317200 Sobic001G317200 Sobic003G297600--Sobic001G317200 Sobic005G091500 Sobic005G091500 Sobic003G297600--Sobic005G091500 Sobic003G297600--Sobic002G055700 Sobic009G139400--Sobic009G077800 Sobic009G139400--Sobic003G297600 Sobic001G119400 Sobic001G119400 Sobic009G139400--Sobic001G119400 Sobic001G177800 Sobic001G177800 Sobic009G139400--Sobic001G177800 Sobic007G184600 Sobic007G184600 Sobic009G139400--Sobic007G184600 Sobic010G066700 Sobic010G066700 Sobic009G139400--Sobic010G066700 Sobic002G353900 Sobic002G353900 Sobic009G139400--Sobic002G353900 Sobic003G382600 Sobic003G382600 Sobic009G139400--Sobic003G382600 Sobic009G139400--Sobic005G029200 Sobic003G393700--Sobic009G077800 Sobic003G393700--Sobic001G070800 Sobic009G234100 Sobic009G234100 Sobic003G393700--Sobic009G234100 Sobic003G393700--Sobic009G139400 Sobic004G321300 Sobic004G321300 Sobic003G393700--Sobic004G321300 Sobic003G393700--Sobic003G297600 Sobic002G393000 Sobic002G393000 Sobic003G393700--Sobic002G393000 Sobic004G061200 Sobic004G061200 Sobic003G393700--Sobic004G061200 Sobic003G393700--Sobic001G177800 Sobic001G070800--Sobic003G297600 Sobic001G070800--Sobic009G077800 Sobic001G070800--Sobic003G393700 Sobic002G416600 Sobic002G416600 Sobic001G070800--Sobic002G416600 Sobic001G070800--Sobic009G139400 Sobic001G070800--Sobic001G177800 Sobic001G070800--Sobic001G317200 Sobic006G099900 Sobic006G099900 Sobic001G070800--Sobic006G099900 Sobic001G252300 Sobic001G252300 Sobic001G070800--Sobic001G252300 Sobic003G303100 Sobic003G303100 Sobic002G055700--Sobic003G303100 Sobic002G055700--Sobic003G382600 Sobic004G237800 Sobic004G237800 Sobic002G055700--Sobic004G237800 Sobic003G426400 Sobic003G426400 Sobic002G055700--Sobic003G426400 Sobic002G055700--Sobic002G353900 Sobic004G148200 Sobic004G148200 Sobic002G055700--Sobic004G148200 Sobic002G055700--Sobic004G189400 Sobic002G338500 Sobic002G338500 Sobic002G055700--Sobic002G338500 Sobic001G367600 Sobic001G367600 Sobic002G055700--Sobic001G367600 Sobic002G017800--Sobic001G367600 Sobic009G111000 Sobic009G111000 Sobic002G017800--Sobic009G111000 Sobic001G318500 Sobic001G318500 Sobic002G017800--Sobic001G318500 Sobic005G018700 Sobic005G018700 Sobic002G017800--Sobic005G018700 Sobic002G017800--Sobic009G077800 Sobic002G017800--Sobic002G055700 Sobic002G017800--Sobic001G325400 Sobic006G103000 Sobic006G103000 Sobic002G017800--Sobic006G103000 Sobic001G500000 Sobic001G500000 Sobic002G017800--Sobic001G500000 Sobic005G029200--Sobic004G189400 Sobic005G029200--Sobic004G148200 Sobic005G029200--Sobic003G297600 Sobic010G213700 Sobic010G213700 Sobic005G029200--Sobic010G213700 Sobic005G029200--Sobic002G055700 Sobic005G029200--Sobic003G303100 Sobic005G029200--Sobic009G077800 Sobic005G029200--Sobic009G139400 Sobic001G423800 Sobic001G423800 Sobic005G029200--Sobic001G423800 Sobic006G039100 Sobic006G039100 Sobic001G325400--Sobic006G039100 Sobic001G325400--Sobic009G111000 Sobic002G125700 Sobic002G125700 Sobic001G325400--Sobic002G125700 Sobic001G462700 Sobic001G462700 Sobic001G325400--Sobic001G462700 Sobic001G325400--Sobic009G077800 Sobic001G325400--Sobic002G017800 Sobic009G231000 Sobic009G231000 Sobic001G325400--Sobic009G231000 Sobic001G325400--Sobic007G087200 Sobic003G117600 Sobic003G117600 Sobic001G325400--Sobic003G117600 Sobic007G087200--Sobic002G125700 Sobic010G259600 Sobic010G259600 Sobic007G087200--Sobic010G259600 Sobic007G087200--Sobic009G077800 Sobic007G087200--Sobic001G325400 Sobic007G087200--Sobic009G139400 Sobic003G255200 Sobic003G255200 Sobic007G087200--Sobic003G255200 Sobic004G046200 Sobic004G046200 Sobic007G087200--Sobic004G046200 Sobic004G101300 Sobic004G101300 Sobic007G087200--Sobic004G101300 Sobic004G107700 Sobic004G107700 Sobic007G087200--Sobic004G107700
Octagon: transcription factors


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