Gene annotation
Transcriptome id Sobic.001G325400.1
Synonym Sb01g031540
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed
UniProt A0A1Z5S8N8
Pfam PF00201
Panther DB PTHR11926 PTHR11926:SF307
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0016758; transferase activity, transferring hexosyl groups GO:0008152metabolic process


Orthologs (automatic annotation)
TAIR AT1G05680 : Uridine diphosphate glycosyltransferase 74E2
RAP-DB (Rice) LOC_Os04g12960.1 : UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed
MaizeGDB (Corn) Zm00025a003029 , Zm00025a003031 , Zm00025a003030
Brachypodium KQJ91066 , KQJ81836 , KQJ82903 , KQK13117
Barley -
Wheat TraesCS2A02G056200 , TraesCS5D02G076400 , TraesCS5A02G305100 , TraesCS5B02G072300 , TraesCS7B02G413300 , TraesCS2D02G054800 , TraesCS7A02G492900 , TraesCS5D02G312100 , TraesCS2A02G054200 , TraesCS2A02G056300
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G039100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@RALFL36 - Rapid ALkalinization Factor RALF family protein precursor, expressed -
2 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
3 Sobic.002G125700 similar to Aquaporin PIP2-6(PubMedID : 29862293)@SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09872: aquaporin PIP
4 Sobic.001G462700 expressed protein -
5 Sobic.009G077800 expressed protein -
6 Sobic.002G017800 expressed protein -
7 Sobic.009G231000 - -
8 Sobic.007G087200 MBTB21 - Bric-a-Brac, Tramtrack, Broad Complex BTB domain with Meprin and TRAF Homology MATH domain, expressed K10523: speckle-type POZ protein
9 Sobic.003G117600 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence./late senescence marker (common during developmental, salt-induced, and dark-induced senescence)"(PubMedID : 27586543)@flowering promoting factor-like 1, putative, expressed -
10 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
11 Sobic.005G091500 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@permease domain containing protein, putative, expressed K06901: putative MFS transporter, AGZA family, xanthine/uracil permease
12 Sobic.002G055700 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed K01183: chitinase
13 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
14 Sobic.004G340900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@OsFBX70 - F-box domain containing protein, expressed -
15 Sobic.007G141500 chorismate mutase, chloroplast precursor, putative, expressed K01850: chorismate mutase
16 Sobic.002G004900 transporter family protein, putative, expressed -
17 Sobic.003G319500 receptor protein kinase, putative, expressed -
18 Sobic.003G297600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Not investigated(PubMedID : 23766026)@ethylene-responsive transcription factor 2, putative, expressed -
19 Sobic.004G189500 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
20 Sobic.001G318500 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase


Gene co-expression network
sample Sobic001G325400 Sobic001G325400 Sobic006G039100 Sobic006G039100 Sobic001G325400--Sobic006G039100 Sobic009G111000 Sobic009G111000 Sobic001G325400--Sobic009G111000 Sobic002G125700 Sobic002G125700 Sobic001G325400--Sobic002G125700 Sobic001G462700 Sobic001G462700 Sobic001G325400--Sobic001G462700 Sobic009G077800 Sobic009G077800 Sobic001G325400--Sobic009G077800 Sobic002G017800 Sobic002G017800 Sobic001G325400--Sobic002G017800 Sobic009G231000 Sobic009G231000 Sobic001G325400--Sobic009G231000 Sobic007G087200 Sobic007G087200 Sobic001G325400--Sobic007G087200 Sobic003G117600 Sobic003G117600 Sobic001G325400--Sobic003G117600 Sobic006G039100--Sobic001G325400 Sobic006G039100--Sobic009G231000 Sobic006G039100--Sobic001G462700 Sobic004G189500 Sobic004G189500 Sobic006G039100--Sobic004G189500 Sobic003G087300 Sobic003G087300 Sobic006G039100--Sobic003G087300 Sobic002G416600 Sobic002G416600 Sobic006G039100--Sobic002G416600 Sobic002G366600 Sobic002G366600 Sobic006G039100--Sobic002G366600 Sobic004G148100 Sobic004G148100 Sobic006G039100--Sobic004G148100 Sobic006G039100--Sobic009G077800 Sobic009G111000--Sobic002G017800 Sobic002G176100 Sobic002G176100 Sobic009G111000--Sobic002G176100 Sobic001G367600 Sobic001G367600 Sobic009G111000--Sobic001G367600 Sobic003G417200 Sobic003G417200 Sobic009G111000--Sobic003G417200 Sobic009G111000--Sobic001G325400 Sobic003G426400 Sobic003G426400 Sobic009G111000--Sobic003G426400 Sobic002G055700 Sobic002G055700 Sobic009G111000--Sobic002G055700 Sobic001G500000 Sobic001G500000 Sobic009G111000--Sobic001G500000 Sobic003G319500 Sobic003G319500 Sobic009G111000--Sobic003G319500 Sobic003G255200 Sobic003G255200 Sobic002G125700--Sobic003G255200 Sobic001G503100 Sobic001G503100 Sobic002G125700--Sobic001G503100 Sobic003G352300 Sobic003G352300 Sobic002G125700--Sobic003G352300 Sobic010G259600 Sobic010G259600 Sobic002G125700--Sobic010G259600 Sobic002G125700--Sobic001G325400 Sobic002G125700--Sobic007G087200 Sobic004G107700 Sobic004G107700 Sobic002G125700--Sobic004G107700 Sobic002G125700--Sobic009G231000 Sobic010G063000 Sobic010G063000 Sobic002G125700--Sobic010G063000 Sobic002G247600 Sobic002G247600 Sobic001G462700--Sobic002G247600 Sobic001G462700--Sobic001G325400 Sobic001G462700--Sobic006G039100 Sobic001G462700--Sobic009G111000 Sobic007G204700 Sobic007G204700 Sobic001G462700--Sobic007G204700 Sobic001G462700--Sobic003G117600 Sobic010G008400 Sobic010G008400 Sobic001G462700--Sobic010G008400 Sobic001G331200 Sobic001G331200 Sobic001G462700--Sobic001G331200 Sobic004G046200 Sobic004G046200 Sobic001G462700--Sobic004G046200 Sobic003G297600 Sobic003G297600 Sobic009G077800--Sobic003G297600 Sobic009G139400 Sobic009G139400 Sobic009G077800--Sobic009G139400 Sobic003G393700 Sobic003G393700 Sobic009G077800--Sobic003G393700 Sobic001G070800 Sobic001G070800 Sobic009G077800--Sobic001G070800 Sobic009G077800--Sobic002G055700 Sobic009G077800--Sobic002G017800 Sobic005G029200 Sobic005G029200 Sobic009G077800--Sobic005G029200 Sobic009G077800--Sobic001G325400 Sobic009G077800--Sobic007G087200 Sobic002G017800--Sobic001G367600 Sobic002G017800--Sobic009G111000 Sobic001G318500 Sobic001G318500 Sobic002G017800--Sobic001G318500 Sobic005G018700 Sobic005G018700 Sobic002G017800--Sobic005G018700 Sobic002G017800--Sobic009G077800 Sobic002G017800--Sobic002G055700 Sobic002G017800--Sobic001G325400 Sobic006G103000 Sobic006G103000 Sobic002G017800--Sobic006G103000 Sobic002G017800--Sobic001G500000 Sobic003G364300 Sobic003G364300 Sobic009G231000--Sobic003G364300 Sobic009G231000--Sobic010G259600 Sobic009G231000--Sobic001G325400 Sobic009G231000--Sobic006G039100 Sobic009G231000--Sobic002G125700 Sobic009G231000--Sobic002G055700 Sobic009G231000--Sobic003G087300 Sobic009G231000--Sobic003G297600 Sobic010G156500 Sobic010G156500 Sobic009G231000--Sobic010G156500 Sobic007G087200--Sobic002G125700 Sobic007G087200--Sobic010G259600 Sobic007G087200--Sobic009G077800 Sobic007G087200--Sobic001G325400 Sobic007G087200--Sobic009G139400 Sobic007G087200--Sobic003G255200 Sobic007G087200--Sobic004G046200 Sobic004G101300 Sobic004G101300 Sobic007G087200--Sobic004G101300 Sobic007G087200--Sobic004G107700 Sobic006G277600 Sobic006G277600 Sobic003G117600--Sobic006G277600 Sobic007G141500 Sobic007G141500 Sobic003G117600--Sobic007G141500 Sobic005G063100 Sobic005G063100 Sobic003G117600--Sobic005G063100 Sobic006G092500 Sobic006G092500 Sobic003G117600--Sobic006G092500 Sobic005G206601 Sobic005G206601 Sobic003G117600--Sobic005G206601 Sobic006G153100 Sobic006G153100 Sobic003G117600--Sobic006G153100 Sobic003G117600--Sobic001G325400 Sobic002G354100 Sobic002G354100 Sobic003G117600--Sobic002G354100 Sobic005G091500 Sobic005G091500 Sobic003G117600--Sobic005G091500
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.