Gene annotation
Transcriptome id Sobic.003G319500.1
Synonym RK3, Sb03g036640, ARK3
Functional annotation receptor protein kinase, putative, expressed
UniProt A0A1B6Q6J1
Pfam PF07714 PF01453 PF00954 PF08276
Panther DB PTHR27002:SF63 PTHR27002
NCBI CDD KOG1187; Serine/threonine protein kinase
KEGG Orthology -
Gene Ontology GO:0004672; protein kinase activity GO:0006468protein phosphorylation


Orthologs (automatic annotation)
TAIR AT4G21380 : receptor kinase 3
RAP-DB (Rice) LOC_Os01g57510.1 : receptor protein kinase, putative, expressed
MaizeGDB (Corn) Zm00025a048024 , Zm00025a006256 , Zm00025a027259 , Zm00025a027258 , Zm00025a039879 , Zm00025a027260
Brachypodium KQK10083 , KQK10097 , KQK10096 , KQK14050
Barley HORVU3Hr1G077170.7 , HORVU3Hr1G077170.6 , HORVU3Hr1G077170.2 , HORVU3Hr1G077170.8 , HORVU2Hr1G121080.6 , HORVU2Hr1G121080.7 , HORVU2Hr1G121080.4 , HORVU2Hr1G121080.5 , HORVU2Hr1G121080.2 , HORVU2Hr1G121080.3 , HORVU2Hr1G121080.1 , HORVU2Hr1G121080.8 , HORVU2Hr1G121080.9 , HORVU2Hr1G121080.18 , HORVU2Hr1G121080.19 , HORVU2Hr1G121080.14 , HORVU2Hr1G121080.15 , HORVU2Hr1G121080.16 , HORVU2Hr1G121080.17 , HORVU2Hr1G121080.10 , HORVU2Hr1G121080.11 , HORVU2Hr1G121080.12 , HORVU2Hr1G121080.13 , HORVU2Hr1G121080.30 , HORVU2Hr1G121080.21 , HORVU2Hr1G121080.26 , HORVU2Hr1G121080.20 , HORVU2Hr1G121080.23 , HORVU2Hr1G121080.22 , HORVU2Hr1G121080.25 , HORVU2Hr1G121080.24 , HORVU2Hr1G121080.29 , HORVU2Hr1G121080.28 , HORVU3Hr1G077170.19 , HORVU3Hr1G077170.18 , HORVU3Hr1G077170.17 , HORVU3Hr1G077170.16 , HORVU3Hr1G077170.15 , HORVU3Hr1G077170.14 , HORVU3Hr1G077170.13 , HORVU3Hr1G077170.12 , HORVU3Hr1G077170.10
Wheat TraesCS2B02G578200 , TraesCS2B02G578200 , TraesCS3D02G316800 , TraesCS3D02G316800 , TraesCS3B02G352300 , TraesCS2D02G548600 , TraesCS2D02G548600 , TraesCS2D02G548600 , TraesCS2D02G548600 , TraesCS3B02G352500 , TraesCS3A02G323500 , TraesCS3A02G323500 , TraesCS3A02G323500 , TraesCS3D02G316900 , TraesCS3A02G323200 , TraesCS3D02G316700 , TraesCS3D02G316700 , TraesCS3A02G323200 , TraesCS2B02G578200 , TraesCS2B02G578200 , TraesCS3D02G317000 , TraesCS2D02G548600 , TraesCS3A02G323400 , TraesCS3A02G323400 , TraesCS2A02G547500 , TraesCS2A02G547500
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G176100 membrane protein, putative, expressed -
2 Sobic.003G417200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@esterase, putative, expressed -
3 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
4 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
5 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
6 Sobic.001G139100 expressed protein -
7 Sobic.001G169500 - -
8 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
9 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
10 Sobic.010G008400 bark storage protein A precursor, putative, expressed -
11 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
12 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.009G032700 peroxidase precursor, putative, expressed K00430: peroxidase
14 Sobic.002G017800 expressed protein -
15 Sobic.001G325400 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@UDP-glucoronosyl/UDP-glucosyl transferase, putative, expressed -
16 Sobic.001G313600 heavy metal-associated domain containing protein, expressed -
17 Sobic.008G186100 helix-loop-helix DNA-binding domain containing protein, expressed -
18 Sobic.001G500000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
19 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
20 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -


Gene co-expression network
sample Sobic003G319500 Sobic003G319500 Sobic002G176100 Sobic002G176100 Sobic003G319500--Sobic002G176100 Sobic003G417200 Sobic003G417200 Sobic003G319500--Sobic003G417200 Sobic009G111000 Sobic009G111000 Sobic003G319500--Sobic009G111000 Sobic002G213600 Sobic002G213600 Sobic003G319500--Sobic002G213600 Sobic001G304100 Sobic001G304100 Sobic003G319500--Sobic001G304100 Sobic001G139100 Sobic001G139100 Sobic003G319500--Sobic001G139100 Sobic001G169500 Sobic001G169500 Sobic003G319500--Sobic001G169500 Sobic005G107900 Sobic005G107900 Sobic003G319500--Sobic005G107900 Sobic003G084400 Sobic003G084400 Sobic003G319500--Sobic003G084400 Sobic002G176100--Sobic003G319500 Sobic002G176100--Sobic009G111000 Sobic004G141100 Sobic004G141100 Sobic002G176100--Sobic004G141100 Sobic010G008400 Sobic010G008400 Sobic002G176100--Sobic010G008400 Sobic002G176100--Sobic003G417200 Sobic010G184800 Sobic010G184800 Sobic002G176100--Sobic010G184800 Sobic008G009400 Sobic008G009400 Sobic002G176100--Sobic008G009400 Sobic002G176100--Sobic001G304100 Sobic009G188000 Sobic009G188000 Sobic002G176100--Sobic009G188000 Sobic003G417200--Sobic009G111000 Sobic003G417200--Sobic003G319500 Sobic003G417200--Sobic001G304100 Sobic005G011300 Sobic005G011300 Sobic003G417200--Sobic005G011300 Sobic001G500000 Sobic001G500000 Sobic003G417200--Sobic001G500000 Sobic003G432700 Sobic003G432700 Sobic003G417200--Sobic003G432700 Sobic003G417200--Sobic003G084400 Sobic003G417200--Sobic002G176100 Sobic008G186100 Sobic008G186100 Sobic003G417200--Sobic008G186100 Sobic002G017800 Sobic002G017800 Sobic009G111000--Sobic002G017800 Sobic009G111000--Sobic002G176100 Sobic001G367600 Sobic001G367600 Sobic009G111000--Sobic001G367600 Sobic009G111000--Sobic003G417200 Sobic001G325400 Sobic001G325400 Sobic009G111000--Sobic001G325400 Sobic003G426400 Sobic003G426400 Sobic009G111000--Sobic003G426400 Sobic002G055700 Sobic002G055700 Sobic009G111000--Sobic002G055700 Sobic009G111000--Sobic001G500000 Sobic009G111000--Sobic003G319500 Sobic002G213600--Sobic001G304100 Sobic004G042000 Sobic004G042000 Sobic002G213600--Sobic004G042000 Sobic003G016100 Sobic003G016100 Sobic002G213600--Sobic003G016100 Sobic002G213600--Sobic003G319500 Sobic003G053300 Sobic003G053300 Sobic002G213600--Sobic003G053300 Sobic002G003800 Sobic002G003800 Sobic002G213600--Sobic002G003800 Sobic004G318700 Sobic004G318700 Sobic002G213600--Sobic004G318700 Sobic010G063000 Sobic010G063000 Sobic002G213600--Sobic010G063000 Sobic001G304201 Sobic001G304201 Sobic002G213600--Sobic001G304201 Sobic001G304100--Sobic009G188000 Sobic001G238400 Sobic001G238400 Sobic001G304100--Sobic001G238400 Sobic001G302600 Sobic001G302600 Sobic001G304100--Sobic001G302600 Sobic001G304100--Sobic002G213600 Sobic001G304100--Sobic003G084400 Sobic001G313600 Sobic001G313600 Sobic001G304100--Sobic001G313600 Sobic001G304100--Sobic005G107900 Sobic001G304100--Sobic003G417200 Sobic006G234800 Sobic006G234800 Sobic001G304100--Sobic006G234800 Sobic006G249300 Sobic006G249300 Sobic001G139100--Sobic006G249300 Sobic009G229000 Sobic009G229000 Sobic001G139100--Sobic009G229000 Sobic001G139100--Sobic008G186100 Sobic001G139100--Sobic001G169500 Sobic010G259600 Sobic010G259600 Sobic001G139100--Sobic010G259600 Sobic001G139100--Sobic003G319500 Sobic004G046200 Sobic004G046200 Sobic001G139100--Sobic004G046200 Sobic001G389000 Sobic001G389000 Sobic001G139100--Sobic001G389000 Sobic007G087200 Sobic007G087200 Sobic001G139100--Sobic007G087200 Sobic001G169500--Sobic005G011300 Sobic004G100700 Sobic004G100700 Sobic001G169500--Sobic004G100700 Sobic005G099000 Sobic005G099000 Sobic001G169500--Sobic005G099000 Sobic003G382800 Sobic003G382800 Sobic001G169500--Sobic003G382800 Sobic004G336500 Sobic004G336500 Sobic001G169500--Sobic004G336500 Sobic001G169500--Sobic003G432700 Sobic001G169500--Sobic006G249300 Sobic001G169500--Sobic005G107900 Sobic002G068600 Sobic002G068600 Sobic001G169500--Sobic002G068600 Sobic001G502400 Sobic001G502400 Sobic005G107900--Sobic001G502400 Sobic005G107900--Sobic001G313600 Sobic005G107900--Sobic003G432700 Sobic005G107900--Sobic005G011300 Sobic006G235100 Sobic006G235100 Sobic005G107900--Sobic006G235100 Sobic006G075400 Sobic006G075400 Sobic005G107900--Sobic006G075400 Sobic009G184000 Sobic009G184000 Sobic005G107900--Sobic009G184000 Sobic005G107900--Sobic009G188000 Sobic005G107900--Sobic001G169500 Sobic003G084400--Sobic005G011300 Sobic003G084400--Sobic001G500000 Sobic002G188900 Sobic002G188900 Sobic003G084400--Sobic002G188900 Sobic003G084400--Sobic004G046200 Sobic003G084400--Sobic001G304100 Sobic003G084400--Sobic001G367600 Sobic003G084400--Sobic005G107900 Sobic003G084400--Sobic004G100700 Sobic003G084400--Sobic001G313600
Octagon: transcription factors


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