Gene annotation
Transcriptome id Sobic.008G186100.2,Sobic.008G186100.3,Sobic.008G186100.4
Synonym NAI1, Sb08g022760
Functional annotation helix-loop-helix DNA-binding domain containing protein, expressed
UniProt A0A1Z5R7M6 , A0A1B6PEI3
Pfam PF00010
Panther DB PTHR23042 PTHR23042:SF25
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G37850 : basic helix-loop-helix (bHLH) DNA-binding superfamily protein
RAP-DB (Rice) LOC_Os12g43620.1 : helix-loop-helix DNA-binding domain containing protein, expressed
MaizeGDB (Corn) Zm00025a007507 , Zm00025a007506 , Zm00025a007959 , Zm00025a011279 , Zm00025a004808 , Zm00025a056111
Brachypodium KQJ85669 , KQJ85668 , KQK13833 , KQK13836
Barley HORVU4Hr1G078910.2 , HORVU4Hr1G003210.2 , HORVU4Hr1G003210.3 , HORVU4Hr1G003210.1 , HORVU4Hr1G078880.1 , HORVU4Hr1G078880.2 , HORVU5Hr1G002090.8 , HORVU5Hr1G002090.9 , HORVU5Hr1G002090.2 , HORVU5Hr1G002090.3 , HORVU5Hr1G002090.1 , HORVU5Hr1G002090.6 , HORVU5Hr1G002090.7 , HORVU5Hr1G002090.4 , HORVU5Hr1G002090.5 , HORVU5Hr1G002090.10 , HORVU5Hr1G002090.11 , HORVU5Hr1G002090.12 , HORVU4Hr1G003340.1 , HORVU4Hr1G003340.2 , HORVU4Hr1G003340.3 , HORVU4Hr1G003340.4 , HORVU4Hr1G003340.5 , HORVU4Hr1G003340.6 , HORVU4Hr1G003340.7 , HORVU4Hr1G003340.8 , HORVU4Hr1G078910.3 , HORVU4Hr1G078910.1 , HORVU4Hr1G078910.4
Wheat TraesCS4B02G020900 , TraesCS4A02G292700 , TraesCS5B02G518500 , TraesCS5D02G517900 , TraesCS5B02G013000 , TraesCS5B02G013000 , TraesCS4D02G018800 , TraesCS4D02G018800 , TraesCS4B02G021500 , TraesCS3D02G014900 , TraesCS3B02G029800 , TraesCS5A02G014800 , TraesCS4A02G292800 , TraesCS4D02G019200 , TraesCS5D02G020600 , TraesCS3A02G019000 , TraesCS4B02G020700 , TraesCS4D02G019100 , TraesCS4D02G018700 , TraesCS4B02G021200 , TraesCS4B02G021200 , TraesCS4A02G354100 , TraesCS5D02G020600
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
2 Sobic.002G287100 flavin-containing monooxygenase family protein, putative, expressed -
3 Sobic.004G100700 ethylene-responsive transcription factor TINY, putative, expressed K09286: EREBP-like factor
4 Sobic.001G169500 - -
5 Sobic.010G029700 tentative name(PubMedID : 31536532)@oxidoreductase, putative, expressed -
6 Sobic.006G249300 expressed protein -
7 Sobic.001G139100 expressed protein -
8 Sobic.002G250000 Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed -
9 Sobic.006G092500 expressed protein -
10 Sobic.010G184800 heme oxygenase 1, putative, expressed K00510: heme oxygenase 1
11 Sobic.001G476500 helix-loop-helix DNA-binding protein, putative, expressed -
12 Sobic.003G417200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@esterase, putative, expressed -
13 Sobic.001G500000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
14 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
15 Sobic.002G188900 cytokinin-O-glucosyltransferase 1, putative, expressed -
16 Sobic.003G319500 receptor protein kinase, putative, expressed -
17 Sobic.005G099000 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@glycosyl hydrolase, putative, expressed -
18 Sobic.006G046900 expressed protein -
19 Sobic.001G140900 helix-loop-helix DNA-binding protein, putative, expressed -
20 Sobic.003G116800 cinnamoyl CoA reductase, putative, expressed K09753: cinnamoyl-CoA reductase


Gene co-expression network
sample Sobic008G186100 Sobic008G186100 Sobic005G011300 Sobic005G011300 Sobic008G186100--Sobic005G011300 Sobic002G287100 Sobic002G287100 Sobic008G186100--Sobic002G287100 Sobic004G100700 Sobic004G100700 Sobic008G186100--Sobic004G100700 Sobic001G169500 Sobic001G169500 Sobic008G186100--Sobic001G169500 Sobic010G029700 Sobic010G029700 Sobic008G186100--Sobic010G029700 Sobic006G249300 Sobic006G249300 Sobic008G186100--Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic008G186100--Sobic001G139100 Sobic002G250000 Sobic002G250000 Sobic008G186100--Sobic002G250000 Sobic006G092500 Sobic006G092500 Sobic008G186100--Sobic006G092500 Sobic005G011300--Sobic004G100700 Sobic005G011300--Sobic001G169500 Sobic002G188900 Sobic002G188900 Sobic005G011300--Sobic002G188900 Sobic005G107900 Sobic005G107900 Sobic005G011300--Sobic005G107900 Sobic003G432700 Sobic003G432700 Sobic005G011300--Sobic003G432700 Sobic004G141200 Sobic004G141200 Sobic005G011300--Sobic004G141200 Sobic001G140900 Sobic001G140900 Sobic005G011300--Sobic001G140900 Sobic003G084400 Sobic003G084400 Sobic005G011300--Sobic003G084400 Sobic004G171400 Sobic004G171400 Sobic005G011300--Sobic004G171400 Sobic001G500000 Sobic001G500000 Sobic002G287100--Sobic001G500000 Sobic002G287100--Sobic008G186100 Sobic001G476500 Sobic001G476500 Sobic002G287100--Sobic001G476500 Sobic009G240600 Sobic009G240600 Sobic002G287100--Sobic009G240600 Sobic009G033300 Sobic009G033300 Sobic002G287100--Sobic009G033300 Sobic001G481400 Sobic001G481400 Sobic002G287100--Sobic001G481400 Sobic009G183400 Sobic009G183400 Sobic002G287100--Sobic009G183400 Sobic002G287100--Sobic010G029700 Sobic002G287100--Sobic006G092500 Sobic004G100700--Sobic005G011300 Sobic004G100700--Sobic002G188900 Sobic004G100700--Sobic001G140900 Sobic001G108200 Sobic001G108200 Sobic004G100700--Sobic001G108200 Sobic004G100700--Sobic001G169500 Sobic004G100700--Sobic004G141200 Sobic003G393900 Sobic003G393900 Sobic004G100700--Sobic003G393900 Sobic004G301000 Sobic004G301000 Sobic004G100700--Sobic004G301000 Sobic001G367600 Sobic001G367600 Sobic004G100700--Sobic001G367600 Sobic001G169500--Sobic005G011300 Sobic001G169500--Sobic004G100700 Sobic005G099000 Sobic005G099000 Sobic001G169500--Sobic005G099000 Sobic003G382800 Sobic003G382800 Sobic001G169500--Sobic003G382800 Sobic004G336500 Sobic004G336500 Sobic001G169500--Sobic004G336500 Sobic001G169500--Sobic003G432700 Sobic001G169500--Sobic006G249300 Sobic001G169500--Sobic005G107900 Sobic002G068600 Sobic002G068600 Sobic001G169500--Sobic002G068600 Sobic010G029700--Sobic008G186100 Sobic010G029700--Sobic002G250000 Sobic010G184800 Sobic010G184800 Sobic010G029700--Sobic010G184800 Sobic010G029700--Sobic002G287100 Sobic003G417200 Sobic003G417200 Sobic010G029700--Sobic003G417200 Sobic002G176100 Sobic002G176100 Sobic010G029700--Sobic002G176100 Sobic002G003800 Sobic002G003800 Sobic010G029700--Sobic002G003800 Sobic001G049900 Sobic001G049900 Sobic010G029700--Sobic001G049900 Sobic001G304100 Sobic001G304100 Sobic010G029700--Sobic001G304100 Sobic006G249300--Sobic001G139100 Sobic006G249300--Sobic001G169500 Sobic006G249300--Sobic004G100700 Sobic006G249300--Sobic008G186100 Sobic006G249300--Sobic005G011300 Sobic003G086600 Sobic003G086600 Sobic006G249300--Sobic003G086600 Sobic010G259600 Sobic010G259600 Sobic006G249300--Sobic010G259600 Sobic006G249300--Sobic003G084400 Sobic006G249300--Sobic009G183400 Sobic001G139100--Sobic006G249300 Sobic009G229000 Sobic009G229000 Sobic001G139100--Sobic009G229000 Sobic001G139100--Sobic008G186100 Sobic001G139100--Sobic001G169500 Sobic001G139100--Sobic010G259600 Sobic003G319500 Sobic003G319500 Sobic001G139100--Sobic003G319500 Sobic004G046200 Sobic004G046200 Sobic001G139100--Sobic004G046200 Sobic001G389000 Sobic001G389000 Sobic001G139100--Sobic001G389000 Sobic007G087200 Sobic007G087200 Sobic001G139100--Sobic007G087200 Sobic002G234400 Sobic002G234400 Sobic002G250000--Sobic002G234400 Sobic001G397300 Sobic001G397300 Sobic002G250000--Sobic001G397300 Sobic002G250000--Sobic010G029700 Sobic002G250000--Sobic008G186100 Sobic002G250000--Sobic005G011300 Sobic007G006300 Sobic007G006300 Sobic002G250000--Sobic007G006300 Sobic004G108200 Sobic004G108200 Sobic002G250000--Sobic004G108200 Sobic002G250000--Sobic002G287100 Sobic003G033900 Sobic003G033900 Sobic002G250000--Sobic003G033900 Sobic006G092500--Sobic001G476500 Sobic006G092500--Sobic009G183400 Sobic006G092500--Sobic004G100700 Sobic004G205100 Sobic004G205100 Sobic006G092500--Sobic004G205100 Sobic006G092500--Sobic009G229000 Sobic005G063100 Sobic005G063100 Sobic006G092500--Sobic005G063100 Sobic003G352300 Sobic003G352300 Sobic006G092500--Sobic003G352300 Sobic003G117600 Sobic003G117600 Sobic006G092500--Sobic003G117600 Sobic006G092500--Sobic010G259600
Octagon: transcription factors


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