Gene annotation
Transcriptome id Sobic.003G417200.1
Synonym MES1, Sb03g045090, ATMES1
Functional annotation SAG (Senescence-associated gene): differentially expressed gene during developmental senescence. (PubMedID : 27586543)
esterase, putative, expressed
UniProt C5XH43
Pfam PF12697
Panther DB PTHR10992 PTHR10992:SF795
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G23620 : methyl esterase 1
RAP-DB (Rice) LOC_Os01g70850.1 : esterase, putative, expressed
MaizeGDB (Corn) Zm00025a026126 , Zm00025a026127 , Zm00025a026122 , Zm00025a026128 , Zm00025a039191
Brachypodium KQK11404
Barley HORVU3Hr1G098280.2 , HORVU3Hr1G098280.1
Wheat TraesCS3A02G456200 , TraesCS3B02G495700 , TraesCS3A02G455900 , TraesCS3D02G447800 , TraesCS3B02G496400 , TraesCS3B02G496300 , TraesCS3B02G496300 , TraesCS3D02G449100 , TraesCS3B02G496200 , TraesCS3B02G496200 , TraesCS3B02G495800 , TraesCS3B02G493900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
2 Sobic.003G319500 receptor protein kinase, putative, expressed -
3 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
4 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
5 Sobic.001G500000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
6 Sobic.003G432700 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@secreted glycoprotein, putative, expressed -
7 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
8 Sobic.002G176100 membrane protein, putative, expressed -
9 Sobic.008G186100 helix-loop-helix DNA-binding domain containing protein, expressed -
10 Sobic.009G032700 peroxidase precursor, putative, expressed K00430: peroxidase
11 Sobic.002G213600 "domain confirmed by Pfam database, expression not supported"(PubMedID : 20499123)@OsSAUR38 - Auxin-responsive SAUR gene family member, expressed K14488: SAUR family protein
12 Sobic.001G367600 SAG (Senescence-associated gene): up-regulated gene during dark-induced senescence.(PubMedID : 27586543)@expressed protein -
13 Sobic.005G107900 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Zm)(PubMedID : 27208977)@O-methyltransferase, putative, expressed -
14 Sobic.001G169500 - -
15 Sobic.010G259600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@Protein O-methyltransferase ZRP4 (Os)(PubMedID : 27208977)@transferase family protein, putative, expressed -
16 Sobic.010G270500 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.010G029700 tentative name(PubMedID : 31536532)@oxidoreductase, putative, expressed -
18 Sobic.002G287100 flavin-containing monooxygenase family protein, putative, expressed -
19 Sobic.003G426400 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.010G184800 heme oxygenase 1, putative, expressed K00510: heme oxygenase 1


Gene co-expression network
sample Sobic003G417200 Sobic003G417200 Sobic009G111000 Sobic009G111000 Sobic003G417200--Sobic009G111000 Sobic003G319500 Sobic003G319500 Sobic003G417200--Sobic003G319500 Sobic001G304100 Sobic001G304100 Sobic003G417200--Sobic001G304100 Sobic005G011300 Sobic005G011300 Sobic003G417200--Sobic005G011300 Sobic001G500000 Sobic001G500000 Sobic003G417200--Sobic001G500000 Sobic003G432700 Sobic003G432700 Sobic003G417200--Sobic003G432700 Sobic003G084400 Sobic003G084400 Sobic003G417200--Sobic003G084400 Sobic002G176100 Sobic002G176100 Sobic003G417200--Sobic002G176100 Sobic008G186100 Sobic008G186100 Sobic003G417200--Sobic008G186100 Sobic002G017800 Sobic002G017800 Sobic009G111000--Sobic002G017800 Sobic009G111000--Sobic002G176100 Sobic001G367600 Sobic001G367600 Sobic009G111000--Sobic001G367600 Sobic009G111000--Sobic003G417200 Sobic001G325400 Sobic001G325400 Sobic009G111000--Sobic001G325400 Sobic003G426400 Sobic003G426400 Sobic009G111000--Sobic003G426400 Sobic002G055700 Sobic002G055700 Sobic009G111000--Sobic002G055700 Sobic009G111000--Sobic001G500000 Sobic009G111000--Sobic003G319500 Sobic003G319500--Sobic002G176100 Sobic003G319500--Sobic003G417200 Sobic003G319500--Sobic009G111000 Sobic002G213600 Sobic002G213600 Sobic003G319500--Sobic002G213600 Sobic003G319500--Sobic001G304100 Sobic001G139100 Sobic001G139100 Sobic003G319500--Sobic001G139100 Sobic001G169500 Sobic001G169500 Sobic003G319500--Sobic001G169500 Sobic005G107900 Sobic005G107900 Sobic003G319500--Sobic005G107900 Sobic003G319500--Sobic003G084400 Sobic009G188000 Sobic009G188000 Sobic001G304100--Sobic009G188000 Sobic001G238400 Sobic001G238400 Sobic001G304100--Sobic001G238400 Sobic001G302600 Sobic001G302600 Sobic001G304100--Sobic001G302600 Sobic001G304100--Sobic002G213600 Sobic001G304100--Sobic003G084400 Sobic001G313600 Sobic001G313600 Sobic001G304100--Sobic001G313600 Sobic001G304100--Sobic005G107900 Sobic001G304100--Sobic003G417200 Sobic006G234800 Sobic006G234800 Sobic001G304100--Sobic006G234800 Sobic004G100700 Sobic004G100700 Sobic005G011300--Sobic004G100700 Sobic005G011300--Sobic001G169500 Sobic002G188900 Sobic002G188900 Sobic005G011300--Sobic002G188900 Sobic005G011300--Sobic005G107900 Sobic005G011300--Sobic003G432700 Sobic004G141200 Sobic004G141200 Sobic005G011300--Sobic004G141200 Sobic001G140900 Sobic001G140900 Sobic005G011300--Sobic001G140900 Sobic005G011300--Sobic003G084400 Sobic004G171400 Sobic004G171400 Sobic005G011300--Sobic004G171400 Sobic001G500000--Sobic003G084400 Sobic002G287100 Sobic002G287100 Sobic001G500000--Sobic002G287100 Sobic001G481400 Sobic001G481400 Sobic001G500000--Sobic001G481400 Sobic009G240600 Sobic009G240600 Sobic001G500000--Sobic009G240600 Sobic004G046200 Sobic004G046200 Sobic001G500000--Sobic004G046200 Sobic001G500000--Sobic001G367600 Sobic001G500000--Sobic009G111000 Sobic001G231700 Sobic001G231700 Sobic001G500000--Sobic001G231700 Sobic006G103000 Sobic006G103000 Sobic001G500000--Sobic006G103000 Sobic003G432700--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic003G432700--Sobic001G502400 Sobic003G228900 Sobic003G228900 Sobic003G432700--Sobic003G228900 Sobic003G432700--Sobic005G011300 Sobic003G432700--Sobic001G313600 Sobic009G184000 Sobic009G184000 Sobic003G432700--Sobic009G184000 Sobic006G075400 Sobic006G075400 Sobic003G432700--Sobic006G075400 Sobic003G432700--Sobic001G169500 Sobic007G169700 Sobic007G169700 Sobic003G432700--Sobic007G169700 Sobic003G084400--Sobic005G011300 Sobic003G084400--Sobic001G500000 Sobic003G084400--Sobic002G188900 Sobic003G084400--Sobic004G046200 Sobic003G084400--Sobic001G304100 Sobic003G084400--Sobic001G367600 Sobic003G084400--Sobic005G107900 Sobic003G084400--Sobic004G100700 Sobic003G084400--Sobic001G313600 Sobic002G176100--Sobic003G319500 Sobic002G176100--Sobic009G111000 Sobic004G141100 Sobic004G141100 Sobic002G176100--Sobic004G141100 Sobic010G008400 Sobic010G008400 Sobic002G176100--Sobic010G008400 Sobic002G176100--Sobic003G417200 Sobic010G184800 Sobic010G184800 Sobic002G176100--Sobic010G184800 Sobic008G009400 Sobic008G009400 Sobic002G176100--Sobic008G009400 Sobic002G176100--Sobic001G304100 Sobic002G176100--Sobic009G188000 Sobic008G186100--Sobic005G011300 Sobic008G186100--Sobic002G287100 Sobic008G186100--Sobic004G100700 Sobic008G186100--Sobic001G169500 Sobic010G029700 Sobic010G029700 Sobic008G186100--Sobic010G029700 Sobic006G249300 Sobic006G249300 Sobic008G186100--Sobic006G249300 Sobic008G186100--Sobic001G139100 Sobic002G250000 Sobic002G250000 Sobic008G186100--Sobic002G250000 Sobic006G092500 Sobic006G092500 Sobic008G186100--Sobic006G092500
Octagon: transcription factors


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