Gene annotation
Transcriptome id Sobic.010G029700.1,Sobic.010G029700.2
Synonym SbNF-YB19, Nuclear Factor Y
Functional annotation tentative name (PubMedID : 31536532)
oxidoreductase, putative, expressed
UniProt A0A1W0VR92 , A0A194YI23
Pfam PF14226 PF03171 PF14226
Panther DB PTHR10209 PTHR10209:SF144
NCBI CDD KOG0143; Iron/ascorbate family oxidoreductases
KEGG Orthology -
Gene Ontology GO:0016491; oxidoreductase activity


Orthologs (automatic annotation)
TAIR AT3G50210 : 2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein
RAP-DB (Rice) LOC_Os09g07020.1 : oxidoreductase, putative, expressed
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.008G186100 helix-loop-helix DNA-binding domain containing protein, expressed -
2 Sobic.002G250000 Protein dihydroflavonol-4-reductase DFR (Os)(PubMedID : 27208977)@dehydrogenase, putative, expressed -
3 Sobic.010G184800 heme oxygenase 1, putative, expressed K00510: heme oxygenase 1
4 Sobic.002G287100 flavin-containing monooxygenase family protein, putative, expressed -
5 Sobic.003G417200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@esterase, putative, expressed -
6 Sobic.002G176100 membrane protein, putative, expressed -
7 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.001G049900 UDP-rhamnose rhamnosyltransferase, putative, expressed -
9 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
10 Sobic.002G234400 white-brown complex homolog protein 11, putative, expressed -
11 Sobic.003G319500 receptor protein kinase, putative, expressed -
12 Sobic.005G011300 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.006G234800 expressed protein -
14 Sobic.010G008400 bark storage protein A precursor, putative, expressed -
15 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
16 Sobic.004G108200 cytochrome P450 93A2, putative, expressed -
17 Sobic.009G240600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@phospholipase, putative, expressed -
18 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
19 Sobic.009G021600 Jacalin-like lectin domain containing protein, putative, expressed -
20 Sobic.001G147900 cytochrome P450, putative, expressed -


Gene co-expression network
sample Sobic010G029700 Sobic010G029700 Sobic008G186100 Sobic008G186100 Sobic010G029700--Sobic008G186100 Sobic002G250000 Sobic002G250000 Sobic010G029700--Sobic002G250000 Sobic010G184800 Sobic010G184800 Sobic010G029700--Sobic010G184800 Sobic002G287100 Sobic002G287100 Sobic010G029700--Sobic002G287100 Sobic003G417200 Sobic003G417200 Sobic010G029700--Sobic003G417200 Sobic002G176100 Sobic002G176100 Sobic010G029700--Sobic002G176100 Sobic002G003800 Sobic002G003800 Sobic010G029700--Sobic002G003800 Sobic001G049900 Sobic001G049900 Sobic010G029700--Sobic001G049900 Sobic001G304100 Sobic001G304100 Sobic010G029700--Sobic001G304100 Sobic005G011300 Sobic005G011300 Sobic008G186100--Sobic005G011300 Sobic008G186100--Sobic002G287100 Sobic004G100700 Sobic004G100700 Sobic008G186100--Sobic004G100700 Sobic001G169500 Sobic001G169500 Sobic008G186100--Sobic001G169500 Sobic008G186100--Sobic010G029700 Sobic006G249300 Sobic006G249300 Sobic008G186100--Sobic006G249300 Sobic001G139100 Sobic001G139100 Sobic008G186100--Sobic001G139100 Sobic008G186100--Sobic002G250000 Sobic006G092500 Sobic006G092500 Sobic008G186100--Sobic006G092500 Sobic002G234400 Sobic002G234400 Sobic002G250000--Sobic002G234400 Sobic001G397300 Sobic001G397300 Sobic002G250000--Sobic001G397300 Sobic002G250000--Sobic010G029700 Sobic002G250000--Sobic008G186100 Sobic002G250000--Sobic005G011300 Sobic007G006300 Sobic007G006300 Sobic002G250000--Sobic007G006300 Sobic004G108200 Sobic004G108200 Sobic002G250000--Sobic004G108200 Sobic002G250000--Sobic002G287100 Sobic003G033900 Sobic003G033900 Sobic002G250000--Sobic003G033900 Sobic010G184800--Sobic001G304100 Sobic009G111000 Sobic009G111000 Sobic010G184800--Sobic009G111000 Sobic010G184800--Sobic001G049900 Sobic010G184800--Sobic010G029700 Sobic010G184800--Sobic008G186100 Sobic001G231700 Sobic001G231700 Sobic010G184800--Sobic001G231700 Sobic010G184800--Sobic002G176100 Sobic004G046200 Sobic004G046200 Sobic010G184800--Sobic004G046200 Sobic006G234800 Sobic006G234800 Sobic010G184800--Sobic006G234800 Sobic001G500000 Sobic001G500000 Sobic002G287100--Sobic001G500000 Sobic002G287100--Sobic008G186100 Sobic001G476500 Sobic001G476500 Sobic002G287100--Sobic001G476500 Sobic009G240600 Sobic009G240600 Sobic002G287100--Sobic009G240600 Sobic009G033300 Sobic009G033300 Sobic002G287100--Sobic009G033300 Sobic001G481400 Sobic001G481400 Sobic002G287100--Sobic001G481400 Sobic009G183400 Sobic009G183400 Sobic002G287100--Sobic009G183400 Sobic002G287100--Sobic010G029700 Sobic002G287100--Sobic006G092500 Sobic003G417200--Sobic009G111000 Sobic003G319500 Sobic003G319500 Sobic003G417200--Sobic003G319500 Sobic003G417200--Sobic001G304100 Sobic003G417200--Sobic005G011300 Sobic003G417200--Sobic001G500000 Sobic003G432700 Sobic003G432700 Sobic003G417200--Sobic003G432700 Sobic003G084400 Sobic003G084400 Sobic003G417200--Sobic003G084400 Sobic003G417200--Sobic002G176100 Sobic003G417200--Sobic008G186100 Sobic002G176100--Sobic003G319500 Sobic002G176100--Sobic009G111000 Sobic004G141100 Sobic004G141100 Sobic002G176100--Sobic004G141100 Sobic010G008400 Sobic010G008400 Sobic002G176100--Sobic010G008400 Sobic002G176100--Sobic003G417200 Sobic002G176100--Sobic010G184800 Sobic008G009400 Sobic008G009400 Sobic002G176100--Sobic008G009400 Sobic002G176100--Sobic001G304100 Sobic009G188000 Sobic009G188000 Sobic002G176100--Sobic009G188000 Sobic006G197100 Sobic006G197100 Sobic002G003800--Sobic006G197100 Sobic004G042000 Sobic004G042000 Sobic002G003800--Sobic004G042000 Sobic003G311800 Sobic003G311800 Sobic002G003800--Sobic003G311800 Sobic001G302600 Sobic001G302600 Sobic002G003800--Sobic001G302600 Sobic002G003800--Sobic001G049900 Sobic001G416200 Sobic001G416200 Sobic002G003800--Sobic001G416200 Sobic004G310200 Sobic004G310200 Sobic002G003800--Sobic004G310200 Sobic003G079400 Sobic003G079400 Sobic002G003800--Sobic003G079400 Sobic002G003800--Sobic001G304100 Sobic001G049900--Sobic003G311800 Sobic001G049900--Sobic002G003800 Sobic001G049900--Sobic010G184800 Sobic009G109000 Sobic009G109000 Sobic001G049900--Sobic009G109000 Sobic001G430100 Sobic001G430100 Sobic001G049900--Sobic001G430100 Sobic001G049900--Sobic006G197100 Sobic008G055100 Sobic008G055100 Sobic001G049900--Sobic008G055100 Sobic001G049900--Sobic004G042000 Sobic001G049900--Sobic004G310200 Sobic001G304100--Sobic009G188000 Sobic001G238400 Sobic001G238400 Sobic001G304100--Sobic001G238400 Sobic001G304100--Sobic001G302600 Sobic002G213600 Sobic002G213600 Sobic001G304100--Sobic002G213600 Sobic001G304100--Sobic003G084400 Sobic001G313600 Sobic001G313600 Sobic001G304100--Sobic001G313600 Sobic005G107900 Sobic005G107900 Sobic001G304100--Sobic005G107900 Sobic001G304100--Sobic003G417200 Sobic001G304100--Sobic006G234800
Octagon: transcription factors


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