Gene annotation
Transcriptome id Sobic.010G008400.2,Sobic.010G008400.1
Synonym Sb10g000960
Functional annotation bark storage protein A precursor, putative, expressed
UniProt A0A194YGN4 , A0A194YHP5
Pfam PF01048
Panther DB PTHR21234 PTHR21234:SF30
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0009116; nucleoside metabolic process GO:0003824catalytic activity


Orthologs (automatic annotation)
TAIR AT4G24350 : Phosphorylase superfamily protein
RAP-DB (Rice) LOC_Os06g02210.1 : bark storage protein A precursor, putative, expressed
MaizeGDB (Corn) Zm00025a050281
Brachypodium PNT76692 , KQK19990
Barley HORVU7Hr1G011580.2 , HORVU7Hr1G011580.3 , HORVU7Hr1G011580.1
Wheat TraesCS4A02G426900 , TraesCS4A02G426900 , TraesCS7D02G057000 , TraesCS7A02G062400
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G176100 membrane protein, putative, expressed -
2 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.003G319500 receptor protein kinase, putative, expressed -
4 Sobic.002G327300 expressed protein -
5 Sobic.004G046200 sulfotransferase domain containing protein, expressed -
6 Sobic.001G500000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@expressed protein -
7 Sobic.010G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@plastocyanin-like domain containing protein, putative, expressed -
8 Sobic.002G017800 expressed protein -
9 Sobic.009G111000 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@pectinesterase, putative, expressed K01051: pectinesterase
10 Sobic.001G462700 expressed protein -
11 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
12 Sobic.004G042000 apoptosis-inducing factor 2, putative, expressed -
13 Sobic.007G204700 expressed protein -
14 Sobic.006G243600 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@peroxidase precursor, putative, expressed K00430: peroxidase
15 Sobic.001G049900 UDP-rhamnose rhamnosyltransferase, putative, expressed -
16 Sobic.003G084400 ZOS1-03 - C2H2 zinc finger protein, expressed -
17 Sobic.008G009400 - -
18 Sobic.006G197100 DNA binding protein, putative, expressed -
19 Sobic.001G310300 glutathione S-transferase, putative, expressed K00799: GST, glutathione S-transferase
20 Sobic.006G203700 EF hand family protein, putative, expressed -


Gene co-expression network
sample Sobic010G008400 Sobic010G008400 Sobic002G176100 Sobic002G176100 Sobic010G008400--Sobic002G176100 Sobic002G003800 Sobic002G003800 Sobic010G008400--Sobic002G003800 Sobic003G319500 Sobic003G319500 Sobic010G008400--Sobic003G319500 Sobic002G327300 Sobic002G327300 Sobic010G008400--Sobic002G327300 Sobic004G046200 Sobic004G046200 Sobic010G008400--Sobic004G046200 Sobic001G500000 Sobic001G500000 Sobic010G008400--Sobic001G500000 Sobic010G085800 Sobic010G085800 Sobic010G008400--Sobic010G085800 Sobic002G017800 Sobic002G017800 Sobic010G008400--Sobic002G017800 Sobic009G111000 Sobic009G111000 Sobic010G008400--Sobic009G111000 Sobic002G176100--Sobic003G319500 Sobic002G176100--Sobic009G111000 Sobic004G141100 Sobic004G141100 Sobic002G176100--Sobic004G141100 Sobic002G176100--Sobic010G008400 Sobic003G417200 Sobic003G417200 Sobic002G176100--Sobic003G417200 Sobic010G184800 Sobic010G184800 Sobic002G176100--Sobic010G184800 Sobic008G009400 Sobic008G009400 Sobic002G176100--Sobic008G009400 Sobic001G304100 Sobic001G304100 Sobic002G176100--Sobic001G304100 Sobic009G188000 Sobic009G188000 Sobic002G176100--Sobic009G188000 Sobic006G197100 Sobic006G197100 Sobic002G003800--Sobic006G197100 Sobic004G042000 Sobic004G042000 Sobic002G003800--Sobic004G042000 Sobic003G311800 Sobic003G311800 Sobic002G003800--Sobic003G311800 Sobic001G302600 Sobic001G302600 Sobic002G003800--Sobic001G302600 Sobic001G049900 Sobic001G049900 Sobic002G003800--Sobic001G049900 Sobic001G416200 Sobic001G416200 Sobic002G003800--Sobic001G416200 Sobic004G310200 Sobic004G310200 Sobic002G003800--Sobic004G310200 Sobic003G079400 Sobic003G079400 Sobic002G003800--Sobic003G079400 Sobic002G003800--Sobic001G304100 Sobic003G319500--Sobic002G176100 Sobic003G319500--Sobic003G417200 Sobic003G319500--Sobic009G111000 Sobic002G213600 Sobic002G213600 Sobic003G319500--Sobic002G213600 Sobic003G319500--Sobic001G304100 Sobic001G139100 Sobic001G139100 Sobic003G319500--Sobic001G139100 Sobic001G169500 Sobic001G169500 Sobic003G319500--Sobic001G169500 Sobic005G107900 Sobic005G107900 Sobic003G319500--Sobic005G107900 Sobic003G084400 Sobic003G084400 Sobic003G319500--Sobic003G084400 Sobic002G327300--Sobic010G008400 Sobic003G264600 Sobic003G264600 Sobic002G327300--Sobic003G264600 Sobic002G327300--Sobic004G046200 Sobic002G327300--Sobic003G084400 Sobic003G228200 Sobic003G228200 Sobic002G327300--Sobic003G228200 Sobic002G327300--Sobic003G319500 Sobic002G327100 Sobic002G327100 Sobic002G327300--Sobic002G327100 Sobic002G327300--Sobic001G500000 Sobic002G327300--Sobic002G017800 Sobic008G106700 Sobic008G106700 Sobic004G046200--Sobic008G106700 Sobic006G044100 Sobic006G044100 Sobic004G046200--Sobic006G044100 Sobic009G187200 Sobic009G187200 Sobic004G046200--Sobic009G187200 Sobic006G199800 Sobic006G199800 Sobic004G046200--Sobic006G199800 Sobic004G046200--Sobic003G084400 Sobic003G255200 Sobic003G255200 Sobic004G046200--Sobic003G255200 Sobic004G046200--Sobic001G500000 Sobic004G046200--Sobic003G079400 Sobic004G046200--Sobic009G111000 Sobic001G500000--Sobic003G084400 Sobic002G287100 Sobic002G287100 Sobic001G500000--Sobic002G287100 Sobic001G481400 Sobic001G481400 Sobic001G500000--Sobic001G481400 Sobic009G240600 Sobic009G240600 Sobic001G500000--Sobic009G240600 Sobic001G500000--Sobic004G046200 Sobic001G367600 Sobic001G367600 Sobic001G500000--Sobic001G367600 Sobic001G500000--Sobic009G111000 Sobic001G231700 Sobic001G231700 Sobic001G500000--Sobic001G231700 Sobic006G103000 Sobic006G103000 Sobic001G500000--Sobic006G103000 Sobic001G059700 Sobic001G059700 Sobic010G085800--Sobic001G059700 Sobic001G310300 Sobic001G310300 Sobic010G085800--Sobic001G310300 Sobic010G085800--Sobic010G008400 Sobic009G109000 Sobic009G109000 Sobic010G085800--Sobic009G109000 Sobic004G297900 Sobic004G297900 Sobic010G085800--Sobic004G297900 Sobic010G085800--Sobic008G009400 Sobic009G088900 Sobic009G088900 Sobic010G085800--Sobic009G088900 Sobic010G085800--Sobic003G311800 Sobic007G218800 Sobic007G218800 Sobic010G085800--Sobic007G218800 Sobic002G017800--Sobic001G367600 Sobic002G017800--Sobic009G111000 Sobic001G318500 Sobic001G318500 Sobic002G017800--Sobic001G318500 Sobic005G018700 Sobic005G018700 Sobic002G017800--Sobic005G018700 Sobic009G077800 Sobic009G077800 Sobic002G017800--Sobic009G077800 Sobic002G055700 Sobic002G055700 Sobic002G017800--Sobic002G055700 Sobic001G325400 Sobic001G325400 Sobic002G017800--Sobic001G325400 Sobic002G017800--Sobic006G103000 Sobic002G017800--Sobic001G500000 Sobic009G111000--Sobic002G017800 Sobic009G111000--Sobic002G176100 Sobic009G111000--Sobic001G367600 Sobic009G111000--Sobic003G417200 Sobic009G111000--Sobic001G325400 Sobic003G426400 Sobic003G426400 Sobic009G111000--Sobic003G426400 Sobic009G111000--Sobic002G055700 Sobic009G111000--Sobic001G500000 Sobic009G111000--Sobic003G319500
Octagon: transcription factors


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