Gene annotation
Transcriptome id Sobic.008G009400.1
Synonym
Functional annotation -
UniProt C5YQ54
Pfam -
Panther DB -
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR -
RAP-DB (Rice) -
MaizeGDB (Corn) -
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
3 Sobic.002G351300 expressed protein -
4 Sobic.003G299300 expressed protein -
5 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
6 Sobic.004G141100 Inositol 1, 3, 4-trisphosphate 5/6-kinase, putative, expressed K00913: inositol-1,3,4-trisphosphate 5/6-kinase / inositol-tetrakisphosphate 1-kinase
7 Sobic.009G188000 NADPH-dependent FMN reductase domain containing protein, expressed K03809: NAD(P)H dehydrogenase (quinone)
8 Sobic.006G235200 expressed protein -
9 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
10 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
11 Sobic.002G176100 membrane protein, putative, expressed -
12 Sobic.001G304100 LTPL144 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
13 Sobic.009G109000 expressed protein -
14 Sobic.003G007600 expressed protein -
15 Sobic.001G238400 expansin precursor, putative, expressed -
16 Sobic.002G327100 expressed protein -
17 Sobic.010G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@plastocyanin-like domain containing protein, putative, expressed -
18 Sobic.001G112100 microtubule associated protein, putative, expressed K16732: protein regulator of cytokinesis 1
19 Sobic.001G300500 expansin precursor, putative, expressed -
20 Sobic.008G127933 - -


Gene co-expression network
sample Sobic008G009400 Sobic008G009400 Sobic004G297900 Sobic004G297900 Sobic008G009400--Sobic004G297900 Sobic004G295100 Sobic004G295100 Sobic008G009400--Sobic004G295100 Sobic002G351300 Sobic002G351300 Sobic008G009400--Sobic002G351300 Sobic003G299300 Sobic003G299300 Sobic008G009400--Sobic003G299300 Sobic010G270700 Sobic010G270700 Sobic008G009400--Sobic010G270700 Sobic004G141100 Sobic004G141100 Sobic008G009400--Sobic004G141100 Sobic009G188000 Sobic009G188000 Sobic008G009400--Sobic009G188000 Sobic006G235200 Sobic006G235200 Sobic008G009400--Sobic006G235200 Sobic001G330300 Sobic001G330300 Sobic008G009400--Sobic001G330300 Sobic003G311800 Sobic003G311800 Sobic004G297900--Sobic003G311800 Sobic004G297900--Sobic008G009400 Sobic004G297900--Sobic006G235200 Sobic001G238300 Sobic001G238300 Sobic004G297900--Sobic001G238300 Sobic004G297900--Sobic004G295100 Sobic001G300500 Sobic001G300500 Sobic004G297900--Sobic001G300500 Sobic009G109000 Sobic009G109000 Sobic004G297900--Sobic009G109000 Sobic002G261500 Sobic002G261500 Sobic004G297900--Sobic002G261500 SobicK026900 SobicK026900 Sobic004G297900--SobicK026900 Sobic010G196000 Sobic010G196000 Sobic004G295100--Sobic010G196000 Sobic004G295100--Sobic004G297900 Sobic004G295100--Sobic008G009400 Sobic006G202600 Sobic006G202600 Sobic004G295100--Sobic006G202600 Sobic004G295100--Sobic001G330300 Sobic004G295100--Sobic003G311800 Sobic004G295100--Sobic006G235200 Sobic004G295100--Sobic001G300500 Sobic007G090469 Sobic007G090469 Sobic004G295100--Sobic007G090469 Sobic002G351300--Sobic004G141100 Sobic002G351300--Sobic008G009400 Sobic007G017500 Sobic007G017500 Sobic002G351300--Sobic007G017500 Sobic006G075400 Sobic006G075400 Sobic002G351300--Sobic006G075400 Sobic002G351300--Sobic003G299300 Sobic009G205500 Sobic009G205500 Sobic002G351300--Sobic009G205500 Sobic006G235100 Sobic006G235100 Sobic002G351300--Sobic006G235100 Sobic004G041900 Sobic004G041900 Sobic002G351300--Sobic004G041900 Sobic004G294400 Sobic004G294400 Sobic002G351300--Sobic004G294400 Sobic003G007600 Sobic003G007600 Sobic003G299300--Sobic003G007600 Sobic003G299300--Sobic008G009400 Sobic003G299300--Sobic001G330300 Sobic010G270500 Sobic010G270500 Sobic003G299300--Sobic010G270500 Sobic003G299300--Sobic009G188000 Sobic001G238400 Sobic001G238400 Sobic003G299300--Sobic001G238400 Sobic001G304100 Sobic001G304100 Sobic003G299300--Sobic001G304100 Sobic003G299300--Sobic004G295100 Sobic006G103000 Sobic006G103000 Sobic003G299300--Sobic006G103000 Sobic003G282100 Sobic003G282100 Sobic010G270700--Sobic003G282100 Sobic010G270700--Sobic008G009400 Sobic010G270700--Sobic001G330300 Sobic010G270700--SobicK026900 Sobic010G270700--Sobic004G297900 Sobic010G270700--Sobic003G299300 Sobic008G127933 Sobic008G127933 Sobic010G270700--Sobic008G127933 Sobic010G270700--Sobic003G311800 Sobic010G270700--Sobic009G109000 Sobic004G141100--Sobic002G351300 Sobic004G141100--Sobic006G235100 Sobic010G082600 Sobic010G082600 Sobic004G141100--Sobic010G082600 Sobic004G141100--Sobic007G017500 Sobic004G141100--Sobic006G075400 Sobic004G141100--Sobic008G009400 Sobic006G054800 Sobic006G054800 Sobic004G141100--Sobic006G054800 Sobic006G008000 Sobic006G008000 Sobic004G141100--Sobic006G008000 Sobic008G066401 Sobic008G066401 Sobic004G141100--Sobic008G066401 Sobic001G313600 Sobic001G313600 Sobic009G188000--Sobic001G313600 Sobic009G188000--Sobic001G304100 Sobic005G107900 Sobic005G107900 Sobic009G188000--Sobic005G107900 Sobic001G502400 Sobic001G502400 Sobic009G188000--Sobic001G502400 Sobic009G188000--Sobic001G238400 Sobic009G188000--Sobic006G235100 Sobic003G084400 Sobic003G084400 Sobic009G188000--Sobic003G084400 Sobic009G188000--Sobic008G009400 Sobic001G295200 Sobic001G295200 Sobic009G188000--Sobic001G295200 Sobic006G235200--Sobic004G297900 Sobic006G235200--Sobic004G295100 Sobic006G235200--Sobic008G009400 Sobic006G235200--Sobic001G300500 Sobic006G235200--Sobic003G311800 Sobic006G235200--Sobic003G299300 Sobic006G172550 Sobic006G172550 Sobic006G235200--Sobic006G172550 Sobic002G183700 Sobic002G183700 Sobic006G235200--Sobic002G183700 Sobic002G092600 Sobic002G092600 Sobic006G235200--Sobic002G092600 Sobic001G330300--Sobic003G299300 Sobic001G330300--Sobic004G295100 Sobic001G330300--Sobic008G009400 Sobic006G050800 Sobic006G050800 Sobic001G330300--Sobic006G050800 Sobic001G330300--Sobic010G270700 Sobic001G330300--Sobic004G141100 Sobic001G330300--Sobic010G196000 Sobic001G242000 Sobic001G242000 Sobic001G330300--Sobic001G242000 Sobic001G330300--Sobic003G282100
Octagon: transcription factors


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