Gene annotation
Transcriptome id Sobic.001G300500.1
Synonym EXPB2, ATHEXPBETA1.4, Sb01g029250, ATEXPB2
Functional annotation expansin precursor, putative, expressed
UniProt A0A1B6QLY5
Pfam PF03330 PF01357
Panther DB PTHR31692 PTHR31692:SF17
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G65680 : expansin B2
RAP-DB (Rice) LOC_Os10g40720.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a051985 , Zm00025a051983 , Zm00025a051980 , Zm00025a051976 , Zm00025a051978 , Zm00025a003327 , Zm00025a003332 , Zm00025a003330 , Zm00025a003331 , Zm00025a000113 , Zm00025a003251
Brachypodium KQJ97767 , KQJ97766 , KQJ97765 , KQJ97764 , KQJ97768 , KQK24135
Barley HORVU1Hr1G054240.1 , HORVU1Hr1G054240.2 , HORVU6Hr1G005760.1 , HORVU6Hr1G055090.1 , HORVU6Hr1G055090.2 , HORVU4Hr1G088140.3 , HORVU4Hr1G088140.2 , HORVU4Hr1G088140.1 , HORVU1Hr1G054250.9 , HORVU1Hr1G054250.8 , HORVU1Hr1G054250.3 , HORVU6Hr1G005810.1 , HORVU1Hr1G054250.1 , HORVU6Hr1G005810.3 , HORVU6Hr1G005810.4 , HORVU1Hr1G054250.6 , HORVU3Hr1G073140.1 , HORVU3Hr1G105170.1 , HORVU3Hr1G105520.2 , HORVU3Hr1G105520.1 , HORVU3Hr1G073120.1 , HORVU3Hr1G105180.1 , HORVU1Hr1G054250.4 , HORVU3Hr1G076110.1 , HORVU1Hr1G054250.2 , HORVU6Hr1G005810.2 , HORVU1Hr1G054250.7
Wheat TraesCS4B02G375200 , TraesCS1D02G215500 , TraesCS1D02G215500 , TraesCS5D02G086000 , TraesCS1B02G226000 , TraesCS3D02G476800 , TraesCS5B02G079400 , TraesCS3B02G524500 , TraesCS3D02G474800 , TraesCS6D02G037700 , TraesCS3A02G480000 , TraesCSU02G085500 , TraesCS4D02G361700 , TraesCS6D02G037500 , TraesCS5A02G537300 , TraesCS1B02G226100 , TraesCS1B02G226100 , TraesCS1B02G226000 , TraesCS1B02G225900 , TraesCS1A02G212300 , TraesCS6A02G032700 , TraesCS6B02G046100 , TraesCS6B02G046200 , TraesCS1D02G215300 , TraesCS1A02G212600 , TraesCS1A02G212400 , TraesCS5A02G073100 , TraesCS6A02G217100 , TraesCS6D02G198400 , TraesCS3D02G476700 , TraesCS6B02G245700 , TraesCS3A02G479900 , TraesCS1D02G215400 , TraesCS4B02G375600 , TraesCS6B02G046300 , TraesCS5A02G538000 , TraesCS6B02G046000 , TraesCS6B02G046400 , TraesCS4D02G361900
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
2 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
3 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
4 Sobic.007G090469 - -
5 Sobic.006G172550 - -
6 Sobic.006G235200 expressed protein -
7 Sobic.001G238300 expansin precursor, putative, expressed -
8 Sobic.006G172601 - -
9 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
10 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
11 Sobic.008G009400 - -
12 Sobic.003G411200 CRAL/TRIO domain containing protein, expressed -
13 Sobic.004G292900 LTPL112 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -
14 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
15 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
16 Sobic.006G157900 C2 domain containing protein, putative, expressed -
17 Sobic.004G318700 OsSub22 - Putative Subtilisin homologue, expressed -
18 Sobic.003G299300 expressed protein -
19 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
20 Sobic.009G109000 expressed protein -


Gene co-expression network
sample Sobic001G300500 Sobic001G300500 Sobic004G297900 Sobic004G297900 Sobic001G300500--Sobic004G297900 Sobic003G311800 Sobic003G311800 Sobic001G300500--Sobic003G311800 Sobic004G295100 Sobic004G295100 Sobic001G300500--Sobic004G295100 Sobic007G090469 Sobic007G090469 Sobic001G300500--Sobic007G090469 Sobic006G172550 Sobic006G172550 Sobic001G300500--Sobic006G172550 Sobic006G235200 Sobic006G235200 Sobic001G300500--Sobic006G235200 Sobic001G238300 Sobic001G238300 Sobic001G300500--Sobic001G238300 Sobic006G172601 Sobic006G172601 Sobic001G300500--Sobic006G172601 SobicK026900 SobicK026900 Sobic001G300500--SobicK026900 Sobic004G297900--Sobic003G311800 Sobic008G009400 Sobic008G009400 Sobic004G297900--Sobic008G009400 Sobic004G297900--Sobic006G235200 Sobic004G297900--Sobic001G238300 Sobic004G297900--Sobic004G295100 Sobic004G297900--Sobic001G300500 Sobic009G109000 Sobic009G109000 Sobic004G297900--Sobic009G109000 Sobic002G261500 Sobic002G261500 Sobic004G297900--Sobic002G261500 Sobic004G297900--SobicK026900 Sobic003G311800--Sobic004G297900 Sobic002G003800 Sobic002G003800 Sobic003G311800--Sobic002G003800 Sobic001G049900 Sobic001G049900 Sobic003G311800--Sobic001G049900 Sobic003G311800--Sobic009G109000 Sobic006G197100 Sobic006G197100 Sobic003G311800--Sobic006G197100 Sobic006G274933 Sobic006G274933 Sobic003G311800--Sobic006G274933 Sobic002G183700 Sobic002G183700 Sobic003G311800--Sobic002G183700 Sobic003G311800--Sobic007G090469 Sobic004G042000 Sobic004G042000 Sobic003G311800--Sobic004G042000 Sobic010G196000 Sobic010G196000 Sobic004G295100--Sobic010G196000 Sobic004G295100--Sobic004G297900 Sobic004G295100--Sobic008G009400 Sobic006G202600 Sobic006G202600 Sobic004G295100--Sobic006G202600 Sobic001G330300 Sobic001G330300 Sobic004G295100--Sobic001G330300 Sobic004G295100--Sobic003G311800 Sobic004G295100--Sobic006G235200 Sobic004G295100--Sobic001G300500 Sobic004G295100--Sobic007G090469 Sobic007G090469--Sobic006G172601 Sobic007G090469--Sobic004G297900 Sobic007G090469--Sobic003G311800 Sobic007G090469--SobicK026900 Sobic007G090469--Sobic001G238300 Sobic004G209400 Sobic004G209400 Sobic007G090469--Sobic004G209400 Sobic007G090469--Sobic004G295100 Sobic005G156500 Sobic005G156500 Sobic007G090469--Sobic005G156500 Sobic007G090469--Sobic001G300500 Sobic006G172500 Sobic006G172500 Sobic006G172550--Sobic006G172500 Sobic004G292900 Sobic004G292900 Sobic006G172550--Sobic004G292900 Sobic001G302600 Sobic001G302600 Sobic006G172550--Sobic001G302600 Sobic006G172550--Sobic006G172601 Sobic006G172550--Sobic004G297900 Sobic006G172550--Sobic001G300500 Sobic005G073000 Sobic005G073000 Sobic006G172550--Sobic005G073000 Sobic006G172550--Sobic004G295100 Sobic006G172550--Sobic003G311800 Sobic006G235200--Sobic004G297900 Sobic006G235200--Sobic004G295100 Sobic006G235200--Sobic008G009400 Sobic006G235200--Sobic001G300500 Sobic006G235200--Sobic003G311800 Sobic003G299300 Sobic003G299300 Sobic006G235200--Sobic003G299300 Sobic006G235200--Sobic006G172550 Sobic006G235200--Sobic002G183700 Sobic002G092600 Sobic002G092600 Sobic006G235200--Sobic002G092600 Sobic001G238300--Sobic006G172601 Sobic001G238300--Sobic002G261500 Sobic001G238300--Sobic004G297900 Sobic002G425000 Sobic002G425000 Sobic001G238300--Sobic002G425000 Sobic001G238300--Sobic007G090469 Sobic001G238300--SobicK026900 Sobic006G260200 Sobic006G260200 Sobic001G238300--Sobic006G260200 Sobic007G050200 Sobic007G050200 Sobic001G238300--Sobic007G050200 Sobic003G140700 Sobic003G140700 Sobic001G238300--Sobic003G140700 Sobic006G172601--Sobic001G238300 Sobic006G172601--Sobic007G090469 Sobic001G238200 Sobic001G238200 Sobic006G172601--Sobic001G238200 Sobic006G172601--Sobic006G172550 Sobic006G225500 Sobic006G225500 Sobic006G172601--Sobic006G225500 Sobic006G172601--Sobic004G297900 Sobic006G172601--Sobic002G261500 Sobic006G172601--Sobic001G300500 Sobic006G172601--Sobic003G140700 SobicK026900--Sobic004G297900 SobicK026900--Sobic007G090469 SobicK026900--Sobic001G238300 SobicK026900--Sobic006G202600 Sobic004G202400 Sobic004G202400 SobicK026900--Sobic004G202400 SobicK026900--Sobic002G425000 Sobic010G270700 Sobic010G270700 SobicK026900--Sobic010G270700 Sobic001G237900 Sobic001G237900 SobicK026900--Sobic001G237900 SobicK026900--Sobic004G295100
Octagon: transcription factors


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