Gene annotation
Transcriptome id Sobic.009G109000.1
Synonym Sb09g017570
Functional annotation expressed protein
UniProt C5YWR3
Pfam -
Panther DB PTHR33702 PTHR33702:SF5
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT2G47485 : -
RAP-DB (Rice) LOC_Os01g20730.1 : expressed protein
MaizeGDB (Corn) Zm00025a043396
Brachypodium -
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
2 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
3 Sobic.001G049900 UDP-rhamnose rhamnosyltransferase, putative, expressed -
4 Sobic.008G055100 dirigent, putative, expressed -
5 Sobic.003G053400 hydrolase, alpha/beta fold family protein, putative, expressed -
6 Sobic.003G411200 CRAL/TRIO domain containing protein, expressed -
7 Sobic.004G348800 "domain confirmed by Pfam database, expression supported by NCBI EST database, expressed in root, expression induced by IAA and BR treatments"(PubMedID : 20499123)@DUF260 domain containing protein, putative, expressed -
8 Sobic.008G009400 - -
9 Sobic.001G430100 - -
10 Sobic.010G212500 - -
11 Sobic.010G271300 carrier, putative, expressed -
12 Sobic.010G085800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@Up-reguralion under heat(PubMedID : 24916767)@plastocyanin-like domain containing protein, putative, expressed -
13 Sobic.003G119500 expressed protein -
14 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
15 Sobic.004G295100 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@aquaporin protein, putative, expressed K09873: aquaporin TIP
16 Sobic.010G270700 GDSL-like lipase/acylhydrolase, putative, expressed -
17 Sobic.002G261500 AIR12, putative, expressed -
18 Sobic.002G003800 plastocyanin-like domain containing protein, putative, expressed -
19 Sobic.001G330300 RCLEA2 - Root cap and Late embryogenesis related family protein precursor, putative, expressed -
20 Sobic.009G088900 membrane associated DUF588 domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic009G109000 Sobic009G109000 Sobic003G311800 Sobic003G311800 Sobic009G109000--Sobic003G311800 Sobic004G297900 Sobic004G297900 Sobic009G109000--Sobic004G297900 Sobic001G049900 Sobic001G049900 Sobic009G109000--Sobic001G049900 Sobic008G055100 Sobic008G055100 Sobic009G109000--Sobic008G055100 Sobic003G053400 Sobic003G053400 Sobic009G109000--Sobic003G053400 Sobic003G411200 Sobic003G411200 Sobic009G109000--Sobic003G411200 Sobic004G348800 Sobic004G348800 Sobic009G109000--Sobic004G348800 Sobic008G009400 Sobic008G009400 Sobic009G109000--Sobic008G009400 Sobic001G430100 Sobic001G430100 Sobic009G109000--Sobic001G430100 Sobic003G311800--Sobic004G297900 Sobic002G003800 Sobic002G003800 Sobic003G311800--Sobic002G003800 Sobic003G311800--Sobic001G049900 Sobic003G311800--Sobic009G109000 Sobic006G197100 Sobic006G197100 Sobic003G311800--Sobic006G197100 Sobic006G274933 Sobic006G274933 Sobic003G311800--Sobic006G274933 Sobic002G183700 Sobic002G183700 Sobic003G311800--Sobic002G183700 Sobic007G090469 Sobic007G090469 Sobic003G311800--Sobic007G090469 Sobic004G042000 Sobic004G042000 Sobic003G311800--Sobic004G042000 Sobic004G297900--Sobic003G311800 Sobic004G297900--Sobic008G009400 Sobic006G235200 Sobic006G235200 Sobic004G297900--Sobic006G235200 Sobic001G238300 Sobic001G238300 Sobic004G297900--Sobic001G238300 Sobic004G295100 Sobic004G295100 Sobic004G297900--Sobic004G295100 Sobic001G300500 Sobic001G300500 Sobic004G297900--Sobic001G300500 Sobic004G297900--Sobic009G109000 Sobic002G261500 Sobic002G261500 Sobic004G297900--Sobic002G261500 SobicK026900 SobicK026900 Sobic004G297900--SobicK026900 Sobic001G049900--Sobic003G311800 Sobic001G049900--Sobic002G003800 Sobic010G184800 Sobic010G184800 Sobic001G049900--Sobic010G184800 Sobic001G049900--Sobic009G109000 Sobic001G049900--Sobic001G430100 Sobic001G049900--Sobic006G197100 Sobic001G049900--Sobic008G055100 Sobic001G049900--Sobic004G042000 Sobic004G310200 Sobic004G310200 Sobic001G049900--Sobic004G310200 Sobic009G088900 Sobic009G088900 Sobic008G055100--Sobic009G088900 Sobic001G514200 Sobic001G514200 Sobic008G055100--Sobic001G514200 Sobic008G055100--Sobic009G109000 Sobic007G218800 Sobic007G218800 Sobic008G055100--Sobic007G218800 Sobic010G096400 Sobic010G096400 Sobic008G055100--Sobic010G096400 Sobic008G055100--Sobic001G049900 Sobic007G176000 Sobic007G176000 Sobic008G055100--Sobic007G176000 Sobic007G178900 Sobic007G178900 Sobic008G055100--Sobic007G178900 Sobic002G154600 Sobic002G154600 Sobic008G055100--Sobic002G154600 Sobic003G053400--Sobic002G261500 Sobic003G053400--Sobic009G088900 Sobic002G425000 Sobic002G425000 Sobic003G053400--Sobic002G425000 Sobic002G124500 Sobic002G124500 Sobic003G053400--Sobic002G124500 Sobic003G053400--Sobic009G109000 Sobic010G212500 Sobic010G212500 Sobic003G053400--Sobic010G212500 Sobic003G053400--Sobic004G297900 Sobic002G365550 Sobic002G365550 Sobic003G053400--Sobic002G365550 Sobic002G365801 Sobic002G365801 Sobic003G053400--Sobic002G365801 Sobic003G411200--Sobic003G311800 Sobic003G411200--Sobic004G297900 Sobic001G238800 Sobic001G238800 Sobic003G411200--Sobic001G238800 Sobic003G411200--Sobic009G109000 Sobic003G411200--Sobic002G183700 Sobic003G411200--Sobic001G300500 Sobic003G411200--Sobic001G049900 Sobic003G411200--Sobic001G430100 Sobic003G411200--Sobic006G235200 Sobic001G264000 Sobic001G264000 Sobic004G348800--Sobic001G264000 Sobic005G215400 Sobic005G215400 Sobic004G348800--Sobic005G215400 Sobic004G348800--Sobic010G212500 Sobic004G348800--Sobic001G430100 Sobic004G348800--Sobic002G003800 Sobic004G348800--Sobic006G197100 Sobic004G348800--Sobic009G109000 Sobic004G348800--Sobic003G311800 Sobic007G050200 Sobic007G050200 Sobic004G348800--Sobic007G050200 Sobic008G009400--Sobic004G297900 Sobic008G009400--Sobic004G295100 Sobic002G351300 Sobic002G351300 Sobic008G009400--Sobic002G351300 Sobic003G299300 Sobic003G299300 Sobic008G009400--Sobic003G299300 Sobic010G270700 Sobic010G270700 Sobic008G009400--Sobic010G270700 Sobic004G141100 Sobic004G141100 Sobic008G009400--Sobic004G141100 Sobic009G188000 Sobic009G188000 Sobic008G009400--Sobic009G188000 Sobic008G009400--Sobic006G235200 Sobic001G330300 Sobic001G330300 Sobic008G009400--Sobic001G330300 Sobic001G430100--Sobic002G183700 Sobic001G430100--Sobic003G311800 Sobic001G430100--Sobic007G050200 Sobic001G430100--Sobic001G049900 Sobic002G001700 Sobic002G001700 Sobic001G430100--Sobic002G001700 Sobic001G430100--Sobic004G348800 Sobic001G430100--Sobic004G297900 Sobic001G430100--Sobic006G197100 Sobic001G430100--Sobic009G109000
Octagon: transcription factors


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