Gene annotation
Transcriptome id Sobic.002G261500.1
Synonym Sb02g029630
Functional annotation AIR12, putative, expressed
UniProt C5X5C2
Pfam PF04526
Panther DB PTHR23130 PTHR23130:SF80
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT5G47530 : Auxin-responsive family protein
RAP-DB (Rice) LOC_Os08g24790.1 : AIR12, putative, expressed
MaizeGDB (Corn) Zm00025a014328
Brachypodium PNT68034
Barley -
Wheat -
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.001G238300 expansin precursor, putative, expressed -
2 Sobic.002G425000 VQ domain containing protein, putative, expressed -
3 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.010G212500 - -
5 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
6 Sobic.003G053400 hydrolase, alpha/beta fold family protein, putative, expressed -
7 Sobic.007G050200 DNA binding protein, putative, expressed -
8 Sobic.001G379400 peroxidase precursor, putative, expressed K00430: peroxidase
9 Sobic.006G260200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
10 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
11 Sobic.006G172601 - -
12 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
13 Sobic.006G089000 helix-loop-helix DNA-binding protein, putative, expressed -
14 Sobic.002G154600 fasciclin-like arabinogalactan protein 8 precursor, putative, expressed -
15 Sobic.001G430100 - -
16 Sobic.006G197100 DNA binding protein, putative, expressed -
17 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
18 Sobic.007G090469 - -
19 Sobic.009G088900 membrane associated DUF588 domain containing protein, putative, expressed -
20 Sobic.002G365801 - -


Gene co-expression network
sample Sobic002G261500 Sobic002G261500 Sobic001G238300 Sobic001G238300 Sobic002G261500--Sobic001G238300 Sobic002G425000 Sobic002G425000 Sobic002G261500--Sobic002G425000 Sobic004G297900 Sobic004G297900 Sobic002G261500--Sobic004G297900 Sobic010G212500 Sobic010G212500 Sobic002G261500--Sobic010G212500 Sobic002G042200 Sobic002G042200 Sobic002G261500--Sobic002G042200 Sobic003G053400 Sobic003G053400 Sobic002G261500--Sobic003G053400 Sobic007G050200 Sobic007G050200 Sobic002G261500--Sobic007G050200 Sobic001G379400 Sobic001G379400 Sobic002G261500--Sobic001G379400 Sobic006G260200 Sobic006G260200 Sobic002G261500--Sobic006G260200 Sobic006G172601 Sobic006G172601 Sobic001G238300--Sobic006G172601 Sobic001G238300--Sobic002G261500 Sobic001G238300--Sobic004G297900 Sobic001G238300--Sobic002G425000 Sobic007G090469 Sobic007G090469 Sobic001G238300--Sobic007G090469 SobicK026900 SobicK026900 Sobic001G238300--SobicK026900 Sobic001G238300--Sobic006G260200 Sobic001G238300--Sobic007G050200 Sobic003G140700 Sobic003G140700 Sobic001G238300--Sobic003G140700 Sobic002G425000--Sobic001G238300 Sobic002G425000--Sobic002G261500 Sobic008G127933 Sobic008G127933 Sobic002G425000--Sobic008G127933 Sobic001G237900 Sobic001G237900 Sobic002G425000--Sobic001G237900 Sobic002G425000--Sobic006G260200 Sobic002G425000--Sobic004G297900 Sobic002G425000--SobicK026900 Sobic002G425000--Sobic003G053400 Sobic006G122800 Sobic006G122800 Sobic002G425000--Sobic006G122800 Sobic003G311800 Sobic003G311800 Sobic004G297900--Sobic003G311800 Sobic008G009400 Sobic008G009400 Sobic004G297900--Sobic008G009400 Sobic006G235200 Sobic006G235200 Sobic004G297900--Sobic006G235200 Sobic004G297900--Sobic001G238300 Sobic004G295100 Sobic004G295100 Sobic004G297900--Sobic004G295100 Sobic001G300500 Sobic001G300500 Sobic004G297900--Sobic001G300500 Sobic009G109000 Sobic009G109000 Sobic004G297900--Sobic009G109000 Sobic004G297900--Sobic002G261500 Sobic004G297900--SobicK026900 Sobic010G212500--Sobic002G261500 Sobic004G348800 Sobic004G348800 Sobic010G212500--Sobic004G348800 Sobic002G365801 Sobic002G365801 Sobic010G212500--Sobic002G365801 Sobic002G365550 Sobic002G365550 Sobic010G212500--Sobic002G365550 Sobic001G395800 Sobic001G395800 Sobic010G212500--Sobic001G395800 Sobic003G119500 Sobic003G119500 Sobic010G212500--Sobic003G119500 Sobic010G212500--Sobic003G053400 Sobic010G212500--Sobic003G311800 Sobic010G212500--Sobic009G109000 Sobic006G197100 Sobic006G197100 Sobic002G042200--Sobic006G197100 Sobic004G139300 Sobic004G139300 Sobic002G042200--Sobic004G139300 Sobic002G042200--Sobic002G261500 Sobic005G065900 Sobic005G065900 Sobic002G042200--Sobic005G065900 Sobic010G148800 Sobic010G148800 Sobic002G042200--Sobic010G148800 Sobic004G202400 Sobic004G202400 Sobic002G042200--Sobic004G202400 Sobic003G157600 Sobic003G157600 Sobic002G042200--Sobic003G157600 Sobic006G251400 Sobic006G251400 Sobic002G042200--Sobic006G251400 Sobic004G209400 Sobic004G209400 Sobic002G042200--Sobic004G209400 Sobic003G053400--Sobic002G261500 Sobic009G088900 Sobic009G088900 Sobic003G053400--Sobic009G088900 Sobic003G053400--Sobic002G425000 Sobic002G124500 Sobic002G124500 Sobic003G053400--Sobic002G124500 Sobic003G053400--Sobic009G109000 Sobic003G053400--Sobic010G212500 Sobic003G053400--Sobic004G297900 Sobic003G053400--Sobic002G365550 Sobic003G053400--Sobic002G365801 Sobic004G322100 Sobic004G322100 Sobic007G050200--Sobic004G322100 Sobic004G323300 Sobic004G323300 Sobic007G050200--Sobic004G323300 Sobic009G221500 Sobic009G221500 Sobic007G050200--Sobic009G221500 Sobic007G050200--Sobic003G140700 Sobic001G430100 Sobic001G430100 Sobic007G050200--Sobic001G430100 Sobic006G256900 Sobic006G256900 Sobic007G050200--Sobic006G256900 Sobic001G058300 Sobic001G058300 Sobic007G050200--Sobic001G058300 Sobic009G199001 Sobic009G199001 Sobic007G050200--Sobic009G199001 Sobic009G219200 Sobic009G219200 Sobic007G050200--Sobic009G219200 Sobic006G089000 Sobic006G089000 Sobic001G379400--Sobic006G089000 Sobic010G147200 Sobic010G147200 Sobic001G379400--Sobic010G147200 Sobic005G160700 Sobic005G160700 Sobic001G379400--Sobic005G160700 Sobic006G277700 Sobic006G277700 Sobic001G379400--Sobic006G277700 Sobic006G079300 Sobic006G079300 Sobic001G379400--Sobic006G079300 Sobic001G234900 Sobic001G234900 Sobic001G379400--Sobic001G234900 Sobic003G337600 Sobic003G337600 Sobic001G379400--Sobic003G337600 Sobic006G174300 Sobic006G174300 Sobic001G379400--Sobic006G174300 Sobic006G003100 Sobic006G003100 Sobic001G379400--Sobic006G003100 Sobic006G260200--Sobic001G238300 Sobic006G260200--Sobic002G425000 Sobic006G260200--Sobic002G261500 Sobic006G260200--Sobic004G297900 Sobic006G260200--Sobic006G122800 Sobic006G260200--Sobic007G090469 Sobic006G260200--Sobic004G202400 Sobic006G260200--Sobic002G042200 Sobic006G260200--Sobic001G237900
Octagon: transcription factors


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