Gene annotation
Transcriptome id Sobic.001G238300.1
Synonym ATEXPA11, ATHEXPALPHA1.14, ATEXP11, EXP11, Sb01g021080, EXPA11
Functional annotation expansin precursor, putative, expressed
UniProt C5X0I3
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os03g31480.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a000709 , Zm00025a023908 , Zm00025a040297 , Zm00025a006815 , Zm00025a006817 , Zm00025a006811 , Zm00025a006813 , Zm00025a040299 , Zm00025a040300
Brachypodium KQJ96857 , KQJ96855 , KQK23578 , KQK03594 , KQK23582
Barley HORVU4Hr1G072580.3 , HORVU4Hr1G072580.1 , HORVU4Hr1G072410.1 , HORVU4Hr1G072580.4 , HORVU5Hr1G106500.4 , HORVU5Hr1G106500.3 , HORVU5Hr1G106500.2 , HORVU4Hr1G072400.1 , HORVU4Hr1G072580.2 , HORVU7Hr1G092600.1 , HORVU7Hr1G092600.2 , HORVU7Hr1G092600.3 , HORVU7Hr1G092600.4 , HORVU7Hr1G092600.5 , HORVU7Hr1G092600.6 , HORVU7Hr1G092600.7
Wheat TraesCS4B02G272600 , TraesCS4B02G271200 , TraesCS4D02G271900 , TraesCS4B02G271100 , TraesCS4B02G271300 , TraesCS5D02G527700 , TraesCS1B02G156700 , TraesCS4D02G271700 , TraesCS7D02G387400 , TraesCS7D02G387400 , TraesCS4D02G270400 , TraesCS4B02G272700 , TraesCS4A02G034300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.006G172601 - -
2 Sobic.002G261500 AIR12, putative, expressed -
3 Sobic.004G297900 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.002G425000 VQ domain containing protein, putative, expressed -
5 Sobic.007G090469 - -
6 Sobic.K026900 peroxidase precursor, putative, expressed K00430: peroxidase
7 Sobic.006G260200 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
8 Sobic.007G050200 DNA binding protein, putative, expressed -
9 Sobic.003G140700 peroxidase precursor, putative, expressed -
10 Sobic.001G300500 expansin precursor, putative, expressed -
11 Sobic.006G089000 helix-loop-helix DNA-binding protein, putative, expressed -
12 Sobic.004G202400 "SAG (Senescence-associated gene): differentially expressed gene during developmental, salt-induced, and dark-induced senescence."(PubMedID : 27586543)@high affinity nitrate transporter, putative, expressed -
13 Sobic.003G311800 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence./late senescence marker during developmental senescence(PubMedID : 27586543)@xylosyltransferase, putative, expressed -
14 Sobic.001G237900 expansin precursor, putative, expressed -
15 Sobic.002G042200 gibberellin receptor GID1L2, putative, expressed -
16 Sobic.005G073000 stress responsive protein, putative, expressed -
17 Sobic.001G238200 expansin precursor, putative, expressed -
18 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
19 Sobic.001G416200 Responsive to hight light 41(PubMedID : 26320239)@ZOS3-09 - C2H2 zinc finger protein, expressed -
20 Sobic.001G302600 LTPL147 - Protease inhibitor/seed storage/LTP family protein precursor, expressed -


Gene co-expression network
sample Sobic001G238300 Sobic001G238300 Sobic006G172601 Sobic006G172601 Sobic001G238300--Sobic006G172601 Sobic002G261500 Sobic002G261500 Sobic001G238300--Sobic002G261500 Sobic004G297900 Sobic004G297900 Sobic001G238300--Sobic004G297900 Sobic002G425000 Sobic002G425000 Sobic001G238300--Sobic002G425000 Sobic007G090469 Sobic007G090469 Sobic001G238300--Sobic007G090469 SobicK026900 SobicK026900 Sobic001G238300--SobicK026900 Sobic006G260200 Sobic006G260200 Sobic001G238300--Sobic006G260200 Sobic007G050200 Sobic007G050200 Sobic001G238300--Sobic007G050200 Sobic003G140700 Sobic003G140700 Sobic001G238300--Sobic003G140700 Sobic006G172601--Sobic001G238300 Sobic006G172601--Sobic007G090469 Sobic001G238200 Sobic001G238200 Sobic006G172601--Sobic001G238200 Sobic006G172550 Sobic006G172550 Sobic006G172601--Sobic006G172550 Sobic006G225500 Sobic006G225500 Sobic006G172601--Sobic006G225500 Sobic006G172601--Sobic004G297900 Sobic006G172601--Sobic002G261500 Sobic001G300500 Sobic001G300500 Sobic006G172601--Sobic001G300500 Sobic006G172601--Sobic003G140700 Sobic002G261500--Sobic001G238300 Sobic002G261500--Sobic002G425000 Sobic002G261500--Sobic004G297900 Sobic010G212500 Sobic010G212500 Sobic002G261500--Sobic010G212500 Sobic002G042200 Sobic002G042200 Sobic002G261500--Sobic002G042200 Sobic003G053400 Sobic003G053400 Sobic002G261500--Sobic003G053400 Sobic002G261500--Sobic007G050200 Sobic001G379400 Sobic001G379400 Sobic002G261500--Sobic001G379400 Sobic002G261500--Sobic006G260200 Sobic003G311800 Sobic003G311800 Sobic004G297900--Sobic003G311800 Sobic008G009400 Sobic008G009400 Sobic004G297900--Sobic008G009400 Sobic006G235200 Sobic006G235200 Sobic004G297900--Sobic006G235200 Sobic004G297900--Sobic001G238300 Sobic004G295100 Sobic004G295100 Sobic004G297900--Sobic004G295100 Sobic004G297900--Sobic001G300500 Sobic009G109000 Sobic009G109000 Sobic004G297900--Sobic009G109000 Sobic004G297900--Sobic002G261500 Sobic004G297900--SobicK026900 Sobic002G425000--Sobic001G238300 Sobic002G425000--Sobic002G261500 Sobic008G127933 Sobic008G127933 Sobic002G425000--Sobic008G127933 Sobic001G237900 Sobic001G237900 Sobic002G425000--Sobic001G237900 Sobic002G425000--Sobic006G260200 Sobic002G425000--Sobic004G297900 Sobic002G425000--SobicK026900 Sobic002G425000--Sobic003G053400 Sobic006G122800 Sobic006G122800 Sobic002G425000--Sobic006G122800 Sobic007G090469--Sobic006G172601 Sobic007G090469--Sobic004G297900 Sobic007G090469--Sobic003G311800 Sobic007G090469--SobicK026900 Sobic007G090469--Sobic001G238300 Sobic004G209400 Sobic004G209400 Sobic007G090469--Sobic004G209400 Sobic007G090469--Sobic004G295100 Sobic005G156500 Sobic005G156500 Sobic007G090469--Sobic005G156500 Sobic007G090469--Sobic001G300500 SobicK026900--Sobic004G297900 SobicK026900--Sobic007G090469 SobicK026900--Sobic001G238300 Sobic006G202600 Sobic006G202600 SobicK026900--Sobic006G202600 Sobic004G202400 Sobic004G202400 SobicK026900--Sobic004G202400 SobicK026900--Sobic002G425000 Sobic010G270700 Sobic010G270700 SobicK026900--Sobic010G270700 SobicK026900--Sobic001G237900 SobicK026900--Sobic004G295100 Sobic006G260200--Sobic001G238300 Sobic006G260200--Sobic002G425000 Sobic006G260200--Sobic002G261500 Sobic006G260200--Sobic004G297900 Sobic006G260200--Sobic006G122800 Sobic006G260200--Sobic007G090469 Sobic006G260200--Sobic004G202400 Sobic006G260200--Sobic002G042200 Sobic006G260200--Sobic001G237900 Sobic004G322100 Sobic004G322100 Sobic007G050200--Sobic004G322100 Sobic004G323300 Sobic004G323300 Sobic007G050200--Sobic004G323300 Sobic009G221500 Sobic009G221500 Sobic007G050200--Sobic009G221500 Sobic007G050200--Sobic003G140700 Sobic001G430100 Sobic001G430100 Sobic007G050200--Sobic001G430100 Sobic006G256900 Sobic006G256900 Sobic007G050200--Sobic006G256900 Sobic001G058300 Sobic001G058300 Sobic007G050200--Sobic001G058300 Sobic009G199001 Sobic009G199001 Sobic007G050200--Sobic009G199001 Sobic009G219200 Sobic009G219200 Sobic007G050200--Sobic009G219200 Sobic003G140700--Sobic009G219200 Sobic003G064800 Sobic003G064800 Sobic003G140700--Sobic003G064800 Sobic003G140700--Sobic006G225500 Sobic003G140700--Sobic004G322100 Sobic001G438200 Sobic001G438200 Sobic003G140700--Sobic001G438200 Sobic002G255000 Sobic002G255000 Sobic003G140700--Sobic002G255000 Sobic003G140700--Sobic001G238200 Sobic005G127400 Sobic005G127400 Sobic003G140700--Sobic005G127400 Sobic004G110700 Sobic004G110700 Sobic003G140700--Sobic004G110700
Octagon: transcription factors


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