Gene annotation
Transcriptome id Sobic.003G140700.3,Sobic.003G140700.4,Sobic.003G140700.2
Synonym Sb03g011990
Functional annotation peroxidase precursor, putative, expressed
UniProt C5XI24
Pfam PF00141
Panther DB PTHR31235 PTHR31235:SF61
NCBI CDD -
KEGG Orthology -
Gene Ontology GO:0006979; response to oxidative stress GO:0004601peroxidase activity


Orthologs (automatic annotation)
TAIR AT4G33420 : Peroxidase superfamily protein
RAP-DB (Rice) LOC_Os01g19020.1 : peroxidase precursor, putative, expressed
MaizeGDB (Corn) Zm00025a024248 , Zm00025a035126 , Zm00025a038144 , Zm00025a005276
Brachypodium KQK07964 , KQK04040 , KQK04369
Barley HORVU7Hr1G108210.3 , HORVU7Hr1G108210.2 , HORVU7Hr1G108210.1 , HORVU7Hr1G108210.5 , HORVU7Hr1G108210.4 , HORVU1Hr1G016660.4 , HORVU1Hr1G016660.1 , HORVU1Hr1G016660.2 , HORVU1Hr1G016660.3
Wheat TraesCS7A02G474200 , TraesCS1D02G079800 , TraesCS7B02G375600 , TraesCS1A02G077700 , TraesCS1A02G077700 , TraesCS7D02G461200
Populus -


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cDNA sequences
Sobic.003G140700


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.009G219200 expressed protein -
2 Sobic.003G064800 dirigent, putative, expressed -
3 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
4 Sobic.004G322100 hypro1, putative, expressed -
5 Sobic.001G438200 expressed protein -
6 Sobic.002G255000 AIR12, putative, expressed -
7 Sobic.001G238200 expansin precursor, putative, expressed -
8 Sobic.005G127400 expressed protein -
9 Sobic.004G110700 DNA binding protein, putative, expressed -
10 Sobic.004G306900 amino acid transporter, putative, expressed -
11 Sobic.001G238000 expansin precursor, putative, expressed -
12 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
13 Sobic.002G183700 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@L-ascorbate oxidase precursor, putative, expressed -
14 Sobic.001G237800 expansin precursor, putative, expressed -
15 Sobic.006G273300 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
16 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.004G209400 carbonyl reductase 3, putative, expressed -
18 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
19 Sobic.004G323300 SCP-like extracellular protein, expressed -
20 Sobic.001G229000 xyloglucan galactosyltransferase KATAMARI1, putative, expressed -


Gene co-expression network
sample Sobic003G140700 Sobic003G140700 Sobic009G219200 Sobic009G219200 Sobic003G140700--Sobic009G219200 Sobic003G064800 Sobic003G064800 Sobic003G140700--Sobic003G064800 Sobic006G225500 Sobic006G225500 Sobic003G140700--Sobic006G225500 Sobic004G322100 Sobic004G322100 Sobic003G140700--Sobic004G322100 Sobic001G438200 Sobic001G438200 Sobic003G140700--Sobic001G438200 Sobic002G255000 Sobic002G255000 Sobic003G140700--Sobic002G255000 Sobic001G238200 Sobic001G238200 Sobic003G140700--Sobic001G238200 Sobic005G127400 Sobic005G127400 Sobic003G140700--Sobic005G127400 Sobic004G110700 Sobic004G110700 Sobic003G140700--Sobic004G110700 Sobic009G219200--Sobic003G140700 Sobic009G219200--Sobic001G438200 Sobic001G237800 Sobic001G237800 Sobic009G219200--Sobic001G237800 Sobic009G219200--Sobic002G255000 Sobic009G219200--Sobic003G064800 Sobic004G306900 Sobic004G306900 Sobic009G219200--Sobic004G306900 Sobic006G079300 Sobic006G079300 Sobic009G219200--Sobic006G079300 Sobic001G238000 Sobic001G238000 Sobic009G219200--Sobic001G238000 Sobic009G219200--Sobic001G238200 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic003G064800--Sobic004G306900 Sobic003G064800--Sobic001G438200 Sobic006G106900 Sobic006G106900 Sobic003G064800--Sobic006G106900 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic007G086300 Sobic007G086300 Sobic003G064800--Sobic007G086300 Sobic010G234500 Sobic010G234500 Sobic003G064800--Sobic010G234500 Sobic009G186500 Sobic009G186500 Sobic006G225500--Sobic009G186500 Sobic006G225500--Sobic003G140700 Sobic006G225500--Sobic005G127400 Sobic006G225500--Sobic002G255000 Sobic003G399600 Sobic003G399600 Sobic006G225500--Sobic003G399600 Sobic006G273300 Sobic006G273300 Sobic006G225500--Sobic006G273300 Sobic002G183700 Sobic002G183700 Sobic006G225500--Sobic002G183700 Sobic006G225500--Sobic003G064800 Sobic007G008600 Sobic007G008600 Sobic006G225500--Sobic007G008600 Sobic003G000100 Sobic003G000100 Sobic004G322100--Sobic003G000100 Sobic010G152400 Sobic010G152400 Sobic004G322100--Sobic010G152400 Sobic004G322100--Sobic003G140700 Sobic004G323300 Sobic004G323300 Sobic004G322100--Sobic004G323300 Sobic004G322100--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic004G322100--Sobic006G019700 Sobic004G029100 Sobic004G029100 Sobic004G322100--Sobic004G029100 Sobic006G028500 Sobic006G028500 Sobic004G322100--Sobic006G028500 Sobic004G322100--Sobic004G110700 Sobic001G438200--Sobic003G064800 Sobic001G438200--Sobic002G255000 Sobic001G438200--Sobic003G140700 Sobic003G319400 Sobic003G319400 Sobic001G438200--Sobic003G319400 Sobic001G438200--Sobic009G219200 Sobic001G438200--Sobic006G106900 Sobic001G438200--Sobic004G306900 Sobic001G438200--Sobic006G273300 Sobic001G438200--Sobic004G322100 Sobic002G255000--Sobic003G064800 Sobic002G255000--Sobic007G008600 Sobic002G255000--Sobic001G438200 Sobic002G255000--Sobic003G140700 Sobic002G255000--Sobic005G127400 Sobic002G255000--Sobic009G186500 Sobic002G255000--Sobic006G225500 Sobic002G255000--Sobic001G238200 Sobic007G100700 Sobic007G100700 Sobic002G255000--Sobic007G100700 Sobic001G238200--Sobic003G064800 Sobic001G238200--Sobic003G140700 Sobic001G238200--Sobic002G255000 Sobic001G238200--Sobic004G306900 Sobic001G238200--Sobic001G238000 Sobic001G238200--Sobic010G234500 Sobic001G238200--Sobic006G106900 Sobic001G058300 Sobic001G058300 Sobic001G238200--Sobic001G058300 Sobic001G238200--Sobic004G323300 Sobic005G127400--Sobic003G064800 Sobic003G349400 Sobic003G349400 Sobic005G127400--Sobic003G349400 Sobic005G127400--Sobic006G225500 Sobic005G127400--Sobic002G255000 Sobic006G150100 Sobic006G150100 Sobic005G127400--Sobic006G150100 Sobic005G127400--Sobic003G140700 Sobic005G127400--Sobic009G186500 Sobic005G127400--Sobic010G234500 Sobic005G127400--Sobic004G110700 Sobic004G110700--Sobic006G028500 Sobic003G269600 Sobic003G269600 Sobic004G110700--Sobic003G269600 Sobic004G110700--Sobic006G150100 Sobic004G110700--Sobic003G140700 Sobic002G003700 Sobic002G003700 Sobic004G110700--Sobic002G003700 Sobic004G110700--Sobic004G322100 Sobic004G110700--Sobic005G127400 Sobic001G229000 Sobic001G229000 Sobic004G110700--Sobic001G229000 Sobic004G110700--Sobic006G019700
Octagon: transcription factors


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