Gene annotation
Transcriptome id Sobic.001G238000.1
Synonym Sb01g021050, ATEXPA11, ATHEXPALPHA1.14, ATEXP11, EXP11, EXPA11
Functional annotation expansin precursor, putative, expressed
UniProt C5X0I0
Pfam PF01357 PF03330
Panther DB PTHR31867 PTHR31867:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os03g31480.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a000709 , Zm00025a023908 , Zm00025a040297 , Zm00025a006815 , Zm00025a006817 , Zm00025a006811 , Zm00025a006813 , Zm00025a040299 , Zm00025a040300
Brachypodium KQJ96856 , KQJ96855 , KQK23578 , KQK03594 , KQJ94340
Barley HORVU3Hr1G004920.2 , HORVU3Hr1G004920.1 , HORVU4Hr1G018460.5 , HORVU4Hr1G018460.4 , HORVU4Hr1G018460.1 , HORVU4Hr1G018460.3 , HORVU4Hr1G072410.1 , HORVU4Hr1G072400.1
Wheat TraesCS3A02G031800 , TraesCS4B02G271100 , TraesCS3B02G376800 , TraesCS1B02G156700 , TraesCS4D02G270200 , TraesCS4D02G270400 , TraesCS3B02G376900 , TraesCS4A02G034300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.002G377700 caltractin, putative, expressed -
2 Sobic.001G238200 expansin precursor, putative, expressed -
3 Sobic.003G140700 peroxidase precursor, putative, expressed -
4 Sobic.001G237800 expansin precursor, putative, expressed -
5 Sobic.004G306900 amino acid transporter, putative, expressed -
6 Sobic.009G219200 expressed protein -
7 Sobic.003G064800 dirigent, putative, expressed -
8 Sobic.010G162800 reticuline oxidase-like protein precursor, putative, expressed -
9 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
10 Sobic.004G322100 hypro1, putative, expressed -
11 Sobic.004G323300 SCP-like extracellular protein, expressed -
12 Sobic.001G438200 expressed protein -
13 Sobic.010G234500 O-methyltransferase, putative, expressed -
14 Sobic.004G110700 DNA binding protein, putative, expressed -
15 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
16 Sobic.006G079300 peroxidase precursor, putative, expressed K00430: peroxidase
17 Sobic.007G050200 DNA binding protein, putative, expressed -
18 Sobic.005G127400 expressed protein -
19 Sobic.001G229000 xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
20 Sobic.002G255000 AIR12, putative, expressed -


Gene co-expression network
sample Sobic001G238000 Sobic001G238000 Sobic002G377700 Sobic002G377700 Sobic001G238000--Sobic002G377700 Sobic001G238200 Sobic001G238200 Sobic001G238000--Sobic001G238200 Sobic003G140700 Sobic003G140700 Sobic001G238000--Sobic003G140700 Sobic001G237800 Sobic001G237800 Sobic001G238000--Sobic001G237800 Sobic004G306900 Sobic004G306900 Sobic001G238000--Sobic004G306900 Sobic009G219200 Sobic009G219200 Sobic001G238000--Sobic009G219200 Sobic003G064800 Sobic003G064800 Sobic001G238000--Sobic003G064800 Sobic010G162800 Sobic010G162800 Sobic001G238000--Sobic010G162800 Sobic006G028500 Sobic006G028500 Sobic001G238000--Sobic006G028500 Sobic002G377700--Sobic001G238000 Sobic002G377700--Sobic001G238200 Sobic006G174300 Sobic006G174300 Sobic002G377700--Sobic006G174300 Sobic001G058300 Sobic001G058300 Sobic002G377700--Sobic001G058300 Sobic002G377700--Sobic010G162800 Sobic003G319400 Sobic003G319400 Sobic002G377700--Sobic003G319400 Sobic002G377700--Sobic009G219200 Sobic002G377700--Sobic004G306900 Sobic006G079300 Sobic006G079300 Sobic002G377700--Sobic006G079300 Sobic001G238200--Sobic003G064800 Sobic001G238200--Sobic003G140700 Sobic002G255000 Sobic002G255000 Sobic001G238200--Sobic002G255000 Sobic001G238200--Sobic004G306900 Sobic001G238200--Sobic001G238000 Sobic010G234500 Sobic010G234500 Sobic001G238200--Sobic010G234500 Sobic006G106900 Sobic006G106900 Sobic001G238200--Sobic006G106900 Sobic001G238200--Sobic001G058300 Sobic004G323300 Sobic004G323300 Sobic001G238200--Sobic004G323300 Sobic003G140700--Sobic009G219200 Sobic003G140700--Sobic003G064800 Sobic006G225500 Sobic006G225500 Sobic003G140700--Sobic006G225500 Sobic004G322100 Sobic004G322100 Sobic003G140700--Sobic004G322100 Sobic001G438200 Sobic001G438200 Sobic003G140700--Sobic001G438200 Sobic003G140700--Sobic002G255000 Sobic003G140700--Sobic001G238200 Sobic005G127400 Sobic005G127400 Sobic003G140700--Sobic005G127400 Sobic004G110700 Sobic004G110700 Sobic003G140700--Sobic004G110700 Sobic001G237800--Sobic009G219200 Sobic001G237800--Sobic010G162800 Sobic001G237800--Sobic003G140700 Sobic001G237800--Sobic002G255000 Sobic001G237800--Sobic005G127400 Sobic001G237800--Sobic001G238000 Sobic001G237800--Sobic003G064800 Sobic001G237800--Sobic001G238200 Sobic009G035900 Sobic009G035900 Sobic001G237800--Sobic009G035900 Sobic004G306900--Sobic006G028500 Sobic004G306900--Sobic003G064800 Sobic007G086300 Sobic007G086300 Sobic004G306900--Sobic007G086300 Sobic003G000100 Sobic003G000100 Sobic004G306900--Sobic003G000100 Sobic004G106100 Sobic004G106100 Sobic004G306900--Sobic004G106100 Sobic006G019700 Sobic006G019700 Sobic004G306900--Sobic006G019700 Sobic004G306900--Sobic003G319400 Sobic010G152400 Sobic010G152400 Sobic004G306900--Sobic010G152400 Sobic004G306900--Sobic004G322100 Sobic009G219200--Sobic003G140700 Sobic009G219200--Sobic001G438200 Sobic009G219200--Sobic001G237800 Sobic009G219200--Sobic002G255000 Sobic009G219200--Sobic003G064800 Sobic009G219200--Sobic004G306900 Sobic009G219200--Sobic006G079300 Sobic009G219200--Sobic001G238000 Sobic009G219200--Sobic001G238200 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic003G064800--Sobic004G306900 Sobic003G064800--Sobic001G438200 Sobic003G064800--Sobic006G106900 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic003G064800--Sobic007G086300 Sobic003G064800--Sobic010G234500 Sobic010G162800--Sobic001G237800 Sobic010G162800--Sobic001G238000 Sobic010G162800--Sobic003G064800 Sobic010G162800--Sobic001G238200 Sobic010G162800--Sobic010G234500 Sobic010G162800--Sobic009G219200 Sobic010G162800--Sobic005G127400 Sobic003G349400 Sobic003G349400 Sobic010G162800--Sobic003G349400 Sobic010G162800--Sobic004G306900 Sobic006G028500--Sobic004G306900 Sobic006G028500--Sobic006G019700 Sobic006G028500--Sobic004G110700 Sobic001G229000 Sobic001G229000 Sobic006G028500--Sobic001G229000 Sobic003G240400 Sobic003G240400 Sobic006G028500--Sobic003G240400 Sobic010G082000 Sobic010G082000 Sobic006G028500--Sobic010G082000 Sobic006G028500--Sobic004G322100 Sobic006G028500--Sobic010G152400 Sobic006G028500--Sobic003G000100
Octagon: transcription factors


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