Gene annotation
Transcriptome id Sobic.004G323300.1
Synonym Sb04g035340
Functional annotation SCP-like extracellular protein, expressed
UniProt C5XU96
Pfam PF00188
Panther DB PTHR10334 PTHR10334:SF207
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT4G25780 : CAP (Cysteine-rich secretory proteins, Antigen 5, and Pathogenesis-related 1 protein) superfamily protein
RAP-DB (Rice) LOC_Os02g54570.1 : SCP-like extracellular protein, expressed
MaizeGDB (Corn) Zm00025a032981 , Zm00025a022396
Brachypodium -
Barley -
Wheat -
Populus -


JBrowse

Open New Page


Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.004G322100 hypro1, putative, expressed -
2 Sobic.001G238200 expansin precursor, putative, expressed -
3 Sobic.003G064800 dirigent, putative, expressed -
4 Sobic.003G140700 peroxidase precursor, putative, expressed -
5 Sobic.006G227500 - -
6 Sobic.004G306900 amino acid transporter, putative, expressed -
7 Sobic.007G050200 DNA binding protein, putative, expressed -
8 Sobic.001G229000 xyloglucan galactosyltransferase KATAMARI1, putative, expressed -
9 Sobic.007G086300 glycosyl hydrolases family 16, putative, expressed -
10 Sobic.006G028500 1-aminocyclopropane-1-carboxylate oxidase homolog 2, putative, expressed -
11 Sobic.009G219200 expressed protein -
12 Sobic.004G110700 DNA binding protein, putative, expressed -
13 Sobic.002G255000 AIR12, putative, expressed -
14 Sobic.001G438200 expressed protein -
15 Sobic.005G127400 expressed protein -
16 Sobic.001G238000 expansin precursor, putative, expressed -
17 Sobic.010G152400 glycosyltransferase, putative, expressed -
18 Sobic.010G234500 O-methyltransferase, putative, expressed -
19 Sobic.006G019700 transferase family protein, putative, expressed -
20 Sobic.003G000100 STIGL1 - Stigma-specific Stig1 family protein precursor, expressed -


Gene co-expression network
sample Sobic004G323300 Sobic004G323300 Sobic004G322100 Sobic004G322100 Sobic004G323300--Sobic004G322100 Sobic001G238200 Sobic001G238200 Sobic004G323300--Sobic001G238200 Sobic003G064800 Sobic003G064800 Sobic004G323300--Sobic003G064800 Sobic003G140700 Sobic003G140700 Sobic004G323300--Sobic003G140700 Sobic006G227500 Sobic006G227500 Sobic004G323300--Sobic006G227500 Sobic004G306900 Sobic004G306900 Sobic004G323300--Sobic004G306900 Sobic007G050200 Sobic007G050200 Sobic004G323300--Sobic007G050200 Sobic001G229000 Sobic001G229000 Sobic004G323300--Sobic001G229000 Sobic007G086300 Sobic007G086300 Sobic004G323300--Sobic007G086300 Sobic003G000100 Sobic003G000100 Sobic004G322100--Sobic003G000100 Sobic010G152400 Sobic010G152400 Sobic004G322100--Sobic010G152400 Sobic004G322100--Sobic003G140700 Sobic004G322100--Sobic004G323300 Sobic004G322100--Sobic004G306900 Sobic006G019700 Sobic006G019700 Sobic004G322100--Sobic006G019700 Sobic004G029100 Sobic004G029100 Sobic004G322100--Sobic004G029100 Sobic006G028500 Sobic006G028500 Sobic004G322100--Sobic006G028500 Sobic004G110700 Sobic004G110700 Sobic004G322100--Sobic004G110700 Sobic001G238200--Sobic003G064800 Sobic001G238200--Sobic003G140700 Sobic002G255000 Sobic002G255000 Sobic001G238200--Sobic002G255000 Sobic001G238200--Sobic004G306900 Sobic001G238000 Sobic001G238000 Sobic001G238200--Sobic001G238000 Sobic010G234500 Sobic010G234500 Sobic001G238200--Sobic010G234500 Sobic006G106900 Sobic006G106900 Sobic001G238200--Sobic006G106900 Sobic001G058300 Sobic001G058300 Sobic001G238200--Sobic001G058300 Sobic001G238200--Sobic004G323300 Sobic005G127400 Sobic005G127400 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic003G064800--Sobic004G306900 Sobic001G438200 Sobic001G438200 Sobic003G064800--Sobic001G438200 Sobic003G064800--Sobic006G106900 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic003G064800--Sobic007G086300 Sobic003G064800--Sobic010G234500 Sobic009G219200 Sobic009G219200 Sobic003G140700--Sobic009G219200 Sobic003G140700--Sobic003G064800 Sobic006G225500 Sobic006G225500 Sobic003G140700--Sobic006G225500 Sobic003G140700--Sobic004G322100 Sobic003G140700--Sobic001G438200 Sobic003G140700--Sobic002G255000 Sobic003G140700--Sobic001G238200 Sobic003G140700--Sobic005G127400 Sobic003G140700--Sobic004G110700 Sobic006G227500--Sobic004G323300 Sobic006G227500--Sobic007G050200 Sobic006G227500--Sobic009G219200 Sobic006G227500--Sobic004G322100 Sobic006G227500--Sobic003G140700 Sobic006G227500--Sobic001G229000 Sobic009G221500 Sobic009G221500 Sobic006G227500--Sobic009G221500 Sobic006G227500--Sobic001G438200 Sobic001G237800 Sobic001G237800 Sobic006G227500--Sobic001G237800 Sobic004G306900--Sobic006G028500 Sobic004G306900--Sobic003G064800 Sobic004G306900--Sobic007G086300 Sobic004G306900--Sobic003G000100 Sobic004G106100 Sobic004G106100 Sobic004G306900--Sobic004G106100 Sobic004G306900--Sobic006G019700 Sobic003G319400 Sobic003G319400 Sobic004G306900--Sobic003G319400 Sobic004G306900--Sobic010G152400 Sobic004G306900--Sobic004G322100 Sobic007G050200--Sobic004G322100 Sobic007G050200--Sobic004G323300 Sobic007G050200--Sobic009G221500 Sobic007G050200--Sobic003G140700 Sobic001G430100 Sobic001G430100 Sobic007G050200--Sobic001G430100 Sobic006G256900 Sobic006G256900 Sobic007G050200--Sobic006G256900 Sobic007G050200--Sobic001G058300 Sobic009G199001 Sobic009G199001 Sobic007G050200--Sobic009G199001 Sobic007G050200--Sobic009G219200 Sobic007G158800 Sobic007G158800 Sobic001G229000--Sobic007G158800 Sobic001G229000--Sobic006G028500 Sobic001G229000--Sobic004G322100 Sobic001G502000 Sobic001G502000 Sobic001G229000--Sobic001G502000 Sobic001G229000--Sobic007G086300 Sobic001G229000--Sobic004G110700 Sobic001G229000--Sobic010G152400 Sobic001G229000--Sobic004G306900 Sobic008G019800 Sobic008G019800 Sobic001G229000--Sobic008G019800 Sobic007G086300--Sobic004G106100 Sobic007G086300--Sobic004G306900 Sobic007G086300--Sobic003G064800 Sobic006G205700 Sobic006G205700 Sobic007G086300--Sobic006G205700 Sobic007G086300--Sobic003G000100 Sobic002G392100 Sobic002G392100 Sobic007G086300--Sobic002G392100 Sobic001G319300 Sobic001G319300 Sobic007G086300--Sobic001G319300 Sobic008G034900 Sobic008G034900 Sobic007G086300--Sobic008G034900 Sobic007G086300--Sobic003G319400
Octagon: transcription factors


© 2015- RIKEN, All rights reserved.