Gene annotation
Transcriptome id Sobic.001G238200.1
Synonym ATEXPA11, ATEXP11, ATHEXPALPHA1.14, EXP11, EXPA11, Sb01g021070
Functional annotation expansin precursor, putative, expressed
UniProt C5X0I2
Pfam PF03330 PF01357
Panther DB PTHR31867 PTHR31867:SF14
NCBI CDD -
KEGG Orthology -
Gene Ontology -


Orthologs (automatic annotation)
TAIR AT1G20190 : expansin 11
RAP-DB (Rice) LOC_Os03g31480.1 : expansin precursor, putative, expressed
MaizeGDB (Corn) Zm00025a023908 , Zm00025a008818 , Zm00025a006815 , Zm00025a006817 , Zm00025a006811 , Zm00025a006813 , Zm00025a016421
Brachypodium KQJ96855 , KQK23578 , KQK03594 , KQK23582
Barley HORVU4Hr1G072580.3 , HORVU4Hr1G072580.1 , HORVU4Hr1G072410.1 , HORVU4Hr1G072580.4 , HORVU4Hr1G072580.2
Wheat TraesCS4B02G272600 , TraesCS4D02G271900 , TraesCS4B02G271300 , TraesCS5D02G527700 , TraesCS1B02G156700 , TraesCS4D02G271700 , TraesCS4D02G270400 , TraesCS4B02G272700 , TraesCS4A02G034300
Populus -


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Expression pattern by RNA-Seq analysis
FPKM plot


Find similar expressed genes
Top 20 genes with similar expressed profiles

Rank Gene Function KEGG orthology
1 Sobic.003G064800 dirigent, putative, expressed -
2 Sobic.003G140700 peroxidase precursor, putative, expressed -
3 Sobic.002G255000 AIR12, putative, expressed -
4 Sobic.004G306900 amino acid transporter, putative, expressed -
5 Sobic.001G238000 expansin precursor, putative, expressed -
6 Sobic.010G234500 O-methyltransferase, putative, expressed -
7 Sobic.006G106900 "cell wall modification, deposition of casparian strips, endodermis, transmembrane"(PubMedID : 24920445)@membrane associated DUF588 domain containing protein, putative, expressed -
8 Sobic.001G058300 SAG (Senescence-associated gene): differentially expressed gene during developmental senescence.(PubMedID : 27586543)@uncharacterized protein At4g06744 precursor, putative, expressed -
9 Sobic.004G323300 SCP-like extracellular protein, expressed -
10 Sobic.001G438200 expressed protein -
11 Sobic.001G237800 expansin precursor, putative, expressed -
12 Sobic.009G186500 peroxidase precursor, putative, expressed K00430: peroxidase
13 Sobic.003G319400 receptor protein kinase, putative, expressed -
14 Sobic.005G127400 expressed protein -
15 Sobic.009G219200 expressed protein -
16 Sobic.002G377700 caltractin, putative, expressed -
17 Sobic.010G162800 reticuline oxidase-like protein precursor, putative, expressed -
18 Sobic.004G322100 hypro1, putative, expressed -
19 Sobic.006G225500 plastocyanin-like domain containing protein, putative, expressed -
20 Sobic.007G008600 GLTP domain containing protein, putative, expressed -


Gene co-expression network
sample Sobic001G238200 Sobic001G238200 Sobic003G064800 Sobic003G064800 Sobic001G238200--Sobic003G064800 Sobic003G140700 Sobic003G140700 Sobic001G238200--Sobic003G140700 Sobic002G255000 Sobic002G255000 Sobic001G238200--Sobic002G255000 Sobic004G306900 Sobic004G306900 Sobic001G238200--Sobic004G306900 Sobic001G238000 Sobic001G238000 Sobic001G238200--Sobic001G238000 Sobic010G234500 Sobic010G234500 Sobic001G238200--Sobic010G234500 Sobic006G106900 Sobic006G106900 Sobic001G238200--Sobic006G106900 Sobic001G058300 Sobic001G058300 Sobic001G238200--Sobic001G058300 Sobic004G323300 Sobic004G323300 Sobic001G238200--Sobic004G323300 Sobic005G127400 Sobic005G127400 Sobic003G064800--Sobic005G127400 Sobic003G064800--Sobic002G255000 Sobic003G064800--Sobic004G306900 Sobic001G438200 Sobic001G438200 Sobic003G064800--Sobic001G438200 Sobic003G064800--Sobic006G106900 Sobic003G064800--Sobic001G238200 Sobic003G064800--Sobic003G140700 Sobic007G086300 Sobic007G086300 Sobic003G064800--Sobic007G086300 Sobic003G064800--Sobic010G234500 Sobic009G219200 Sobic009G219200 Sobic003G140700--Sobic009G219200 Sobic003G140700--Sobic003G064800 Sobic006G225500 Sobic006G225500 Sobic003G140700--Sobic006G225500 Sobic004G322100 Sobic004G322100 Sobic003G140700--Sobic004G322100 Sobic003G140700--Sobic001G438200 Sobic003G140700--Sobic002G255000 Sobic003G140700--Sobic001G238200 Sobic003G140700--Sobic005G127400 Sobic004G110700 Sobic004G110700 Sobic003G140700--Sobic004G110700 Sobic002G255000--Sobic003G064800 Sobic007G008600 Sobic007G008600 Sobic002G255000--Sobic007G008600 Sobic002G255000--Sobic001G438200 Sobic002G255000--Sobic003G140700 Sobic002G255000--Sobic005G127400 Sobic009G186500 Sobic009G186500 Sobic002G255000--Sobic009G186500 Sobic002G255000--Sobic006G225500 Sobic002G255000--Sobic001G238200 Sobic007G100700 Sobic007G100700 Sobic002G255000--Sobic007G100700 Sobic006G028500 Sobic006G028500 Sobic004G306900--Sobic006G028500 Sobic004G306900--Sobic003G064800 Sobic004G306900--Sobic007G086300 Sobic003G000100 Sobic003G000100 Sobic004G306900--Sobic003G000100 Sobic004G106100 Sobic004G106100 Sobic004G306900--Sobic004G106100 Sobic006G019700 Sobic006G019700 Sobic004G306900--Sobic006G019700 Sobic003G319400 Sobic003G319400 Sobic004G306900--Sobic003G319400 Sobic010G152400 Sobic010G152400 Sobic004G306900--Sobic010G152400 Sobic004G306900--Sobic004G322100 Sobic002G377700 Sobic002G377700 Sobic001G238000--Sobic002G377700 Sobic001G238000--Sobic001G238200 Sobic001G238000--Sobic003G140700 Sobic001G237800 Sobic001G237800 Sobic001G238000--Sobic001G237800 Sobic001G238000--Sobic004G306900 Sobic001G238000--Sobic009G219200 Sobic001G238000--Sobic003G064800 Sobic010G162800 Sobic010G162800 Sobic001G238000--Sobic010G162800 Sobic001G238000--Sobic006G028500 Sobic003G349400 Sobic003G349400 Sobic010G234500--Sobic003G349400 Sobic010G234500--Sobic003G064800 Sobic010G234500--Sobic005G127400 Sobic010G234500--Sobic002G255000 Sobic010G234500--Sobic001G238200 Sobic010G234500--Sobic009G186500 Sobic002G068000 Sobic002G068000 Sobic010G234500--Sobic002G068000 Sobic010G234500--Sobic004G306900 Sobic010G234500--Sobic006G019700 Sobic006G106900--Sobic003G319400 Sobic005G202300 Sobic005G202300 Sobic006G106900--Sobic005G202300 Sobic006G106900--Sobic003G064800 Sobic001G414800 Sobic001G414800 Sobic006G106900--Sobic001G414800 Sobic006G106900--Sobic004G306900 Sobic001G507100 Sobic001G507100 Sobic006G106900--Sobic001G507100 Sobic009G181600 Sobic009G181600 Sobic006G106900--Sobic009G181600 Sobic006G106900--Sobic001G438200 Sobic003G280000 Sobic003G280000 Sobic006G106900--Sobic003G280000 Sobic001G058300--Sobic001G238200 Sobic001G058300--Sobic001G438200 Sobic001G058300--Sobic003G140700 Sobic001G058300--Sobic003G319400 Sobic001G058300--Sobic004G306900 Sobic001G058300--Sobic005G202300 Sobic003G282200 Sobic003G282200 Sobic001G058300--Sobic003G282200 Sobic001G058300--Sobic006G106900 Sobic006G174300 Sobic006G174300 Sobic001G058300--Sobic006G174300 Sobic004G323300--Sobic004G322100 Sobic004G323300--Sobic001G238200 Sobic004G323300--Sobic003G064800 Sobic004G323300--Sobic003G140700 Sobic006G227500 Sobic006G227500 Sobic004G323300--Sobic006G227500 Sobic004G323300--Sobic004G306900 Sobic007G050200 Sobic007G050200 Sobic004G323300--Sobic007G050200 Sobic001G229000 Sobic001G229000 Sobic004G323300--Sobic001G229000 Sobic004G323300--Sobic007G086300
Octagon: transcription factors


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